Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30890 Brassica napus
A07p07930 Brassica napus
Aa31LG8G11110 Aethionema arabicum
Actinidia02359 Actinidia chinensis
Actinidia09405 Actinidia chinensis
Actinidia17294 Actinidia chinensis
Actinidia20340 Actinidia chinensis
Ah.04g153040 Amaranthus hybridus
Ah.10g029130 Amaranthus hybridus
Ah.14g081470 Amaranthus hybridus
AL3G39850 Arabidopsis lyrata
Aqoxy7G01823 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1L91FV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3E4AL2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3J1LPB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6677MB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8Q1F66 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QS1SX0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RGWA1C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WUED23 Arachis hypogaea
AT3G24420 Arabidopsis thaliana
ATR0037G031 Amborella trichopoda
Atru.chr7.1303 Acer truncatum
AUR62011022 Chenopodium quinoa
AUR62033395 Chenopodium quinoa
BcaB04g20388 Brassica carinata
BcaB06g26624 Brassica carinata
BcaC06g35695 Brassica carinata
BolC1t03876H Brassica oleracea
BolC7t41668H Brassica oleracea
BraA01t03217Z Brassica rapa
BraA07t28582Z Brassica rapa
C01p39270 Brassica napus
C07p11940 Brassica napus
CANSAT56G1797 Cannabis sativa
CANSAT56G4444 Cannabis sativa
CANSAT64G1665 Cannabis sativa
CARHR100510 Cardamine hirsuta
Carub.0003s2472 Capsella rubella
Cc06_g09370 Coffea canephora
Cc06_g23240 Coffea canephora
CDE06G1979 Ceratophyllum demersum
CDE07G2008 Ceratophyllum demersum
Cfa003288 Carpinus fangiana
Ciclev10009167m.g Citrus clementina
CiPaw.03G234900 Carya illinoinensis
CiPaw.04G166900 Carya illinoinensis
ClCG00G002590 Citrullus lanatus
ClCG06G010390 Citrullus lanatus
ClCG10G017800 Citrullus lanatus
COL.COLO4_29435 Corchorus olitorius
COL.COLO4_34882 Corchorus olitorius
Cpa.g.sc23.136 Carica papaya
Cpa.g.sc85.19 Carica papaya
CsaV3_1G030830 Cucumis sativus L.
CsaV3_3G038500 Cucumis sativus L.
CsaV3_7G005540 Cucumis sativus L.
CSS0000088 Camellia sinensis var. sinensis
CSS0004232 Camellia sinensis var. sinensis
CSS0005349 Camellia sinensis var. sinensis
CSS0006927 Camellia sinensis var. sinensis
CSS0034648 Camellia sinensis var. sinensis
CSS0038802 Camellia sinensis var. sinensis
DCAR_012087 Daucus carota
Dinv24031 Davidia involucrata
Dinv36605 Davidia involucrata
Duzib150G1272 Durio zibethinus
Duzib168G1721 Durio zibethinus
ECA236G0936 Erigeron canadensis
EL10Ac8g18533 Beta vulgaris
Eucgr.C01073 Eucalyptus grandis
Eucgr.C01074 Eucalyptus grandis
Eucgr.C01075 Eucalyptus grandis
Eucgr.C01454 Eucalyptus grandis
Eucgr.C04133 Eucalyptus grandis
Eucgr.K01876 Eucalyptus grandis
Eucgr.K01878 Eucalyptus grandis
FAN19G2072 Fragaria x ananassa
FAN23G2881 Fragaria x ananassa
FAN26G0215 Fragaria x ananassa
FAN26G1245 Fragaria x ananassa
FAN28G0312 Fragaria x ananassa
FvH4_1g05320 Fragaria vesca
Glyma.03G206800 Glycine max
Glyma.05G232500 Glycine max
Glyma.07G089300 Glycine max
Glyma.08G039900 Glycine max
Glyma.09G187700 Glycine max
Glyma.20G044100 Glycine max
Gohir.A05G021300 Gossypium hirsutum
Gohir.A06G060800 Gossypium hirsutum
Gohir.A09G130400 Gossypium hirsutum
Gohir.D05G022700 Gossypium hirsutum
Gohir.D05G022733 Gossypium hirsutum
Gohir.D05G022800 Gossypium hirsutum
Gohir.D06G059200 Gossypium hirsutum
Gohir.D09G126400 Gossypium hirsutum
Gorai.006G145200 Gossypium raimondii
Gorai.009G023000 Gossypium raimondii
Gorai.010G069000 Gossypium raimondii
GSVIVG01015425001 Vitis vinifera
GSVIVG01015426001 Vitis vinifera
GSVIVG01033429001 Vitis vinifera
HanXRQChr05g0138081 Helianthus annuus
HanXRQChr06g0180061 Helianthus annuus
Haze_25685 Corylus avellana
Hma1.2p1_0018F.1_g013180 Hydrangea macrophylla
HPP92_007678 Vanilla planifolia
Hund09114 Selenicereus undatus
Lalb_Chr14g0371341 Lupinus albus
Lalb_Chr24g0397621 Lupinus albus
Lalb_Chr24g0397631 Lupinus albus
Lj1A1135T84 Lonicera japonica
Lj2g0008495 Lotus japonicus
Lj7A645G24 Lonicera japonica
Lj7P643T19 Lonicera japonica
Lsat_1_v5_gn_8_94781 Lactuca sativa
Manes.03G069132 Manihot esculenta
Manes.09G040500 Manihot esculenta
Manes.16G070900 Manihot esculenta
MBI01_g03363_MAGBIO Magnolia biondii
MD02G1056400 Malus domestica
MD12G1051000 Malus domestica
MD14G1049700 Malus domestica
MD15G1189400 Malus domestica
Medtr3g045440 Medicago truncatula
Medtr6g086560 Medicago truncatula
MELO3C009594.2 Cucumis melo
MELO3C025317.2 Cucumis melo
Migut.J01183 Erythranthe guttata
MSTRG.6070 Avicennia marina
Nitab4.5_0000279g0060 Nicotiana tabacum
Nitab4.5_0002038g0020 Nicotiana tabacum
Nn2g11813 Nelumbo nucifera
Nn2g15820 Nelumbo nucifera
Nn4g22916 Nelumbo nucifera
Nn7g35897 Nelumbo nucifera
Nn8g39258 Nelumbo nucifera
Oeu034565.1 Olea europaea
Oeu050663.1 Olea europaea
Os01g0595600 Oryza sativa ssp. japonica
Peaxi162Scf00552g00052 Petunia axillaris
Peaxi162Scf00552g00514 Petunia axillaris
Peaxi162Scf00560g00616 Petunia axillaris
PGR102G0389 Punica granatum
PGSC0003DMG400027428 Solanum tuberosum
Phvul.002G314800 Phaseolus vulgaris
Phvul.004G160800 Phaseolus vulgaris
Potri.006G155500 Populus trichocarpa
Potri.016G062700 Populus trichocarpa
Prupe.7G085800 Prunus persica
Prupe.7G227500 Prunus persica
Psat1g039520 Pisum sativum
PSO063G4797 Papaver somniferum
PSO782G4568 Papaver somniferum
QL02p085999 Quercus lobata
QL07p025541 Quercus lobata
RcHm_v2.0_Chr2g0091021 Rosa chinensis
RcHm_v2.0_Chr3g0478651 Rosa chinensis
Rhsim03G0244600 Rhododendron simsii
Rhsim04G0093400 Rhododendron simsii
Sabra06G0123600 Salix brachista
Sabra16G0064700 Salix brachista
SalBow6G0876 Salvia bowleyana
Sc14g0000320 Simmondsia chinensis
Sed0008443 Sechium edule
Sed0024273 Sechium edule
SEGI_26080 Sequoiadendron giganteum
SEGI_29876 Sequoiadendron giganteum
SEGI_33615 Sequoiadendron giganteum
SGA_v2.0_scaffold229G43312 Striga asiatica
SGA_v2.0_scaffold45G17074 Striga asiatica
Solyc05g018403.1 Solanum lycopersicum
Solyc05g018413.1 Solanum lycopersicum
Sopen05g015210 Solanum pennellii
Sp3g22190 Schrenkiella parvula
TAR383G0865 Trochodendron aralioides
TAR626G1167 Trochodendron aralioides
THA.LOC104808748 Tarenaya hassleriana
Thecc.05G180300 Theobroma cacao
Thecc.09G114400 Theobroma cacao
Thhalv10002637m.g Eutrema salsugineum
TPR.G11939 Trifolium pratense
TPR.G31452 Trifolium pratense
TWI34G1875 Tripterygium wilfordii
TWI63G1135 Tripterygium wilfordii
TWI74G1685 Tripterygium wilfordii
unitig_578.g15932 Utricularia gibba
unitig_578.g15933 Utricularia gibba
vmacro06200 Vaccinium macrocarpon
VMungo0251G3531 Vigna mungo
VMungo0464G1140 Vigna mungo
VMungo0540G0015 Vigna mungo
VMungo1383G2793 Vigna mungo
Zm00001eb161200 Zea mays
Zm00001eb283680 Zea mays

User provided reference genes

Program Settings