Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12730 Brassica napus
A09p60740 Brassica napus
Aa31LG7G1260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3545 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1420 Anthoceros agrestis
Actinidia21653 Actinidia chinensis
Actinidia21885 Actinidia chinensis
Ah.10g033760 Amaranthus hybridus
Ah.15g094310 Amaranthus hybridus
AL1G28980 Arabidopsis lyrata
Aqoxy7G02764 Aquilegia oxysepala
AT1G16810 Arabidopsis thaliana
ATR0691G256 Amborella trichopoda
AUR62001340 Chenopodium quinoa
AUR62020628 Chenopodium quinoa
AUR62025665 Chenopodium quinoa
AUR62038755 Chenopodium quinoa
AUR62043674 Chenopodium quinoa
BcaB02g06674 Brassica carinata
BcaC05g25537 Brassica carinata
BcaC07g41382 Brassica carinata
BcaC07g41457 Brassica carinata
BolC5t30218H Brassica oleracea
BolC8t51975H Brassica oleracea
BraA06t24433Z Brassica rapa
BraA09t41447Z Brassica rapa
C05p15030 Brassica napus
C08p44320 Brassica napus
CAN.G1364.5 Capsicum annuum
CAN.G484.40 Capsicum annuum
CANSAT21G1552 Cannabis sativa
CANSAT78G1543 Cannabis sativa
CARHR017280 Cardamine hirsuta
Carub.0001s1654 Capsella rubella
Ca_15678_v3 Cicer arietinum L.
Ca_20968_v3 Cicer arietinum L.
CBR_g28897 Chara braunii
Cc04_g00170 Coffea canephora
CDE02G3623 Ceratophyllum demersum
CDE10G0166 Ceratophyllum demersum
Cfa002155 Carpinus fangiana
Ciclev10033044m.g Citrus clementina
CiPaw.01G091100 Carya illinoinensis
CiPaw.07G214500 Carya illinoinensis
ClCG05G017450 Citrullus lanatus
ClCG07G014650 Citrullus lanatus
COL.COLO4_18611 Corchorus olitorius
COL.COLO4_31159 Corchorus olitorius
Cpa.g.sc155.14 Carica papaya
Cpa.g.sc244.9 Carica papaya
Cre16.g686900 Chlamydomonas reinhardtii
CsaV3_3G030510 Cucumis sativus L.
CsaV3_3G046950 Cucumis sativus L.
CSS0008124 Camellia sinensis var. sinensis
CSS0035377 Camellia sinensis var. sinensis
DCAR_014051 Daucus carota
Dinv37779 Davidia involucrata
Duzib168G0090 Durio zibethinus
ECA246G3918 Erigeron canadensis
EL10Ac2g03718 Beta vulgaris
EL10Ac7g18157 Beta vulgaris
Eucgr.C02104 Eucalyptus grandis
Eucgr.F04029 Eucalyptus grandis
FAN02G1520 Fragaria x ananassa
FAN05G3232 Fragaria x ananassa
FAN09G1684 Fragaria x ananassa
FAN14G2000 Fragaria x ananassa
FAN15G3686 Fragaria x ananassa
FAN20G1539 Fragaria x ananassa
FAN24G2833 Fragaria x ananassa
FvH4_2g30690 Fragaria vesca
FvH4_6g37010 Fragaria vesca
Glyma.07G002500 Glycine max
Glyma.08G224300 Glycine max
Gohir.A05G114700 Gossypium hirsutum
Gohir.A06G106800 Gossypium hirsutum
Gohir.D05G115100 Gossypium hirsutum
Gohir.D06G109000 Gossypium hirsutum
Gorai.009G119200 Gossypium raimondii
Gorai.010G123800 Gossypium raimondii
GSVIVG01029544001 Vitis vinifera
HanXRQChr17g0540351 Helianthus annuus
Haze_16256 Corylus avellana
Hma1.2p1_0517F.1_g170810 Hydrangea macrophylla
Hma1.2p1_1111F.1_g258420 Hydrangea macrophylla
Hma1.2p1_3612F.1_g337040 Hydrangea macrophylla
HPP92_015317 Vanilla planifolia
Hund03278 Selenicereus undatus
Hund05674 Selenicereus undatus
Lalb_Chr01g0011711 Lupinus albus
Lj3g0014374 Lotus japonicus
Lsat_1_v5_gn_3_32561 Lactuca sativa
Manes.14G008100 Manihot esculenta
Manes.16G136700 Manihot esculenta
Mapoly0014s0045 Marchantia polymorpha
MBI18_g21785_MAGBIO Magnolia biondii
MCO05G241 Micromonas commoda
MD09G1165100 Malus domestica
MD15G1110000 Malus domestica
Medtr3g108730 Medicago truncatula
Medtr4g005440 Medicago truncatula
MELO3C003642.2 Cucumis melo
MELO3C026711.2 Cucumis melo
Migut.A00444 Erythranthe guttata
Migut.I01198 Erythranthe guttata
MSTRG.24617 Avicennia marina
Nitab4.5_0000570g0230 Nicotiana tabacum
Nitab4.5_0003259g0090 Nicotiana tabacum
Nitab4.5_0003466g0020 Nicotiana tabacum
Nn8g40872 Nelumbo nucifera
Oeu038372.1 Olea europaea
Os02g0727500 Oryza sativa ssp. japonica
Peaxi162Scf00045g01524 Petunia axillaris
Peaxi162Scf00700g00150 Petunia axillaris
PGR031G1504 Punica granatum
PGSC0003DMG400004633 Solanum tuberosum
Phvul.009G100233 Phaseolus vulgaris
Phvul.010G163800 Phaseolus vulgaris
Potri.005G174400 Populus trichocarpa
Potri.010G253400 Populus trichocarpa
Pp3c10_8030 Physcomitrium patens
Prupe.1G462200 Prunus persica
Prupe.3G022600 Prunus persica
Psat7g264280 Pisum sativum
PSO144G0068 Papaver somniferum
PSO170G2381 Papaver somniferum
QL03p005885 Quercus lobata
QL03p006486 Quercus lobata
QL05p084468 Quercus lobata
QL05p084482 Quercus lobata
QL05p084549 Quercus lobata
QL05p084856 Quercus lobata
QL05p084923 Quercus lobata
RcHm_v2.0_Chr2g0149551 Rosa chinensis
RcHm_v2.0_Chr6g0312211 Rosa chinensis
Rhsim03G0090500 Rhododendron simsii
Rhsim07G0207900 Rhododendron simsii
Rhsim07G0208000 Rhododendron simsii
Rhsim08G0250000 Rhododendron simsii
Rhsim12G0215300 Rhododendron simsii
Sabra05G0131400 Salix brachista
Sabra10G0197100 Salix brachista
SalBow6G5510 Salvia bowleyana
Sc09g0007920 Simmondsia chinensis
Sc15g0001110 Simmondsia chinensis
Sed0017404 Sechium edule
Sed0017750 Sechium edule
SEGI_29786 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33266 Striga asiatica
SGA_v2.0_scaffold27G11665 Striga asiatica
SHI03290 Sapria himalayana
SHI10896 Sapria himalayana
SHI31118 Sapria himalayana
SHI38233 Sapria himalayana
SMO141G0269 Selaginella moellendorffii
Solyc12g099490.3 Solanum lycopersicum
Sopen08g002120 Solanum pennellii
Sopen12g034160 Solanum pennellii
Sp1g14950 Schrenkiella parvula
TAR383G0116 Trochodendron aralioides
TAR383G0925 Trochodendron aralioides
TAR626G1359 Trochodendron aralioides
THA.LOC104803879 Tarenaya hassleriana
THA.LOC104812330 Tarenaya hassleriana
Thecc.06G057700 Theobroma cacao
Thecc.09G005100 Theobroma cacao
Thhalv10009062m.g Eutrema salsugineum
TPR.G12495 Trifolium pratense
TPR.G38727 Trifolium pratense
unitig_0.g1638 Utricularia gibba
vmacro06801 Vaccinium macrocarpon
vmacro17966 Vaccinium macrocarpon
VMungo0331G1664 Vigna mungo
Zm00001eb140150 Zea mays
Zm00001eb186960 Zea mays
Zm00001eb189570 Zea mays
Zm00001eb189590 Zea mays
Zm00001eb189600 Zea mays
Zm00001eb189610 Zea mays
Zm00001eb189620 Zea mays
Zm00001eb189630 Zea mays
Zm00001eb189640 Zea mays
Zm00001eb189650 Zea mays
Zm00001eb189660 Zea mays
Zm00001eb189670 Zea mays
Zm00001eb189680 Zea mays
Zm00001eb189690 Zea mays
Zm00001eb189700 Zea mays
Zm00001eb189730 Zea mays
Zm00001eb189740 Zea mays
Zm00001eb189750 Zea mays
Zm00001eb189760 Zea mays
Zm00001eb189780 Zea mays
Zm00001eb189790 Zea mays
Zm00001eb189800 Zea mays
Zm00001eb189810 Zea mays
Zm00001eb189820 Zea mays
Zm00001eb229720 Zea mays
Zm00001eb229740 Zea mays
Zm00001eb253430 Zea mays
Zm00001eb360860 Zea mays

User provided reference genes

Program Settings