Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p23570 Brassica napus
A07p26660 Brassica napus
A07p45260 Brassica napus
Aa31LG4G680 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5799 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5803 Anthoceros agrestis
Actinidia01792 Actinidia chinensis
Actinidia15825 Actinidia chinensis
Ah.01g020990 Amaranthus hybridus
AL2G41090 Arabidopsis lyrata
Aqoxy7G01853 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A9FW4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QQR1AK Arachis hypogaea
AT1G80410 Arabidopsis thaliana
ATR0037G015 Amborella trichopoda
Atru.chr1.3222 Acer truncatum
AUR62011613 Chenopodium quinoa
AUR62016429 Chenopodium quinoa
BcaB02g07275 Brassica carinata
BcaB05g25270 Brassica carinata
BcaC03g15969 Brassica carinata
BcaC03g15971 Brassica carinata
BcaC03g15973 Brassica carinata
BcaC08g45310 Brassica carinata
BcaC08g47587 Brassica carinata
BolC2t09744H Brassica oleracea
BolC6t38078H Brassica oleracea
BolC6t40424H Brassica oleracea
BraA02t07350Z Brassica rapa
BraA07t30309Z Brassica rapa
BraA07t32030Z Brassica rapa
C02p37340 Brassica napus
C06p29140 Brassica napus
C06p54110 Brassica napus
CAN.G395.20 Capsicum annuum
CAN.G438.51 Capsicum annuum
CANSAT56G4360 Cannabis sativa
CARHR074830 Cardamine hirsuta
Carub.0002s2716 Capsella rubella
Ca_01105_v3 Cicer arietinum L.
Ca_20406_v3 Cicer arietinum L.
CBR_g51323 Chara braunii
Cc04_g03600 Coffea canephora
CDE06G0582 Ceratophyllum demersum
CDE07G0468 Ceratophyllum demersum
Cfa002048 Carpinus fangiana
Cfa026533 Carpinus fangiana
Ciclev10024839m.g Citrus clementina
CiPaw.01G240700 Carya illinoinensis
CiPaw.02G152400 Carya illinoinensis
ClCG09G002330 Citrullus lanatus
COL.COLO4_30327 Corchorus olitorius
Cpa.g.sc10.165 Carica papaya
Cpa.g.sc10.171 Carica papaya
Cre06.g278225 Chlamydomonas reinhardtii
CsaV3_7G032990 Cucumis sativus L.
CSS0013959 Camellia sinensis var. sinensis
CSS0017782 Camellia sinensis var. sinensis
DCAR_016229 Daucus carota
DCAR_021318 Daucus carota
DCAR_029021 Daucus carota
Dinv30530 Davidia involucrata
Dinv30531 Davidia involucrata
Dinv38060 Davidia involucrata
Duzib010G0002 Durio zibethinus
Duzib063G0001 Durio zibethinus
Duzib063G0002 Durio zibethinus
Duzib063G0005 Durio zibethinus
Duzib094G0001 Durio zibethinus
Duzib094G0002 Durio zibethinus
Duzib114G0746 Durio zibethinus
Duzib114G1026 Durio zibethinus
Duzib141G0004 Durio zibethinus
Duzib141G0005 Durio zibethinus
Duzib141G0006 Durio zibethinus
Duzib158G0002 Durio zibethinus
Duzib192G1045 Durio zibethinus
Duzib235G0335 Durio zibethinus
Duzib262G0001 Durio zibethinus
ECA232G1494 Erigeron canadensis
ECA234G1721 Erigeron canadensis
EL10Ac9g21989 Beta vulgaris
Eucgr.F03005 Eucalyptus grandis
Eucgr.L03302 Eucalyptus grandis
FAN02G2217 Fragaria x ananassa
FAN05G2514 Fragaria x ananassa
FAN09G4597 Fragaria x ananassa
FAN14G3898 Fragaria x ananassa
FvH4_6g30900 Fragaria vesca
Glyma.07G034300 Glycine max
Glyma.08G207800 Glycine max
Glyma.13G360900 Glycine max
Glyma.15G013000 Glycine max
Gohir.A02G122600 Gossypium hirsutum
Gohir.A05G127400 Gossypium hirsutum
Gohir.A10G078900 Gossypium hirsutum
Gohir.D03G073700 Gossypium hirsutum
Gohir.D05G128300 Gossypium hirsutum
Gohir.D10G072550 Gossypium hirsutum
Gohir.D10G072600 Gossypium hirsutum
Gorai.002G058200 Gossypium raimondii
Gorai.009G132500 Gossypium raimondii
Gorai.011G078200 Gossypium raimondii
GSVIVG01017154001 Vitis vinifera
HanXRQChr10g0314931 Helianthus annuus
HanXRQChr14g0455941 Helianthus annuus
HanXRQChr16g0501061 Helianthus annuus
Haze_16459 Corylus avellana
Haze_26772 Corylus avellana
Hma1.2p1_0682F.1_g202640 Hydrangea macrophylla
HPP92_003639 Vanilla planifolia
Hund00592 Selenicereus undatus
Hund06600 Selenicereus undatus
Hund30638 Selenicereus undatus
Lalb_Chr14g0373541 Lupinus albus
Lalb_Chr24g0395741 Lupinus albus
Lalb_Chr25g0279601 Lupinus albus
Lj3g0010300 Lotus japonicus
Lj3g0020255 Lotus japonicus
Lj5A63T62 Lonicera japonica
Lj5C63T3 Lonicera japonica
Lj9C506T2 Lonicera japonica
Lsat_1_v5_gn_4_103500 Lactuca sativa
Lsat_1_v5_gn_5_129901 Lactuca sativa
Manes.04G121200 Manihot esculenta
Manes.11G052000 Manihot esculenta
Mapoly0079s0051 Marchantia polymorpha
MCO04G539 Micromonas commoda
MD09G1215200 Malus domestica
MD17G1197900 Malus domestica
Medtr2g102435 Medicago truncatula
Medtr4g011890 Medicago truncatula
MELO3C023369.2 Cucumis melo
Migut.I00844 Erythranthe guttata
MSTRG.11092 Avicennia marina
MSTRG.22704 Avicennia marina
Nitab4.5_0000351g0230 Nicotiana tabacum
Nitab4.5_0002327g0070 Nicotiana tabacum
Nitab4.5_0003159g0060 Nicotiana tabacum
Nitab4.5_0003885g0030 Nicotiana tabacum
Nn2g11837 Nelumbo nucifera
Nn8g39281 Nelumbo nucifera
Oeu033496.1 Olea europaea
Oeu063956.1 Olea europaea
Os01g0617500 Oryza sativa ssp. japonica
Peaxi162Scf00015g00253 Petunia axillaris
Peaxi162Scf00207g00840 Petunia axillaris
PGR102G2510 Punica granatum
PGSC0003DMG400002639 Solanum tuberosum
Phvul.005G172700 Phaseolus vulgaris
Phvul.010G151600 Phaseolus vulgaris
Potri.001G177700 Populus trichocarpa
Potri.001G178000 Populus trichocarpa
Potri.003G056700 Populus trichocarpa
Pp3c10_20750 Physcomitrium patens
Pp3c3_24080 Physcomitrium patens
Pp3c4_20560 Physcomitrium patens
PRCOL_00006302 Prasinoderma coloniale
Prupe.3G074300 Prunus persica
Psat1g029880 Pisum sativum
Psat5g299320 Pisum sativum
Psat7g222840 Pisum sativum
Psat7g253400 Pisum sativum
PSO063G0077 Papaver somniferum
PSO724G0063 Papaver somniferum
PSO782G4571 Papaver somniferum
RcHm_v2.0_Chr2g0137391 Rosa chinensis
Rhsim08G0218500 Rhododendron simsii
Sabra01G0148600 Salix brachista
Sabra03G0032300 Salix brachista
SalBow2G0578 Salvia bowleyana
Sc12g0009020 Simmondsia chinensis
Sc12g0009150 Simmondsia chinensis
Sed0021699 Sechium edule
Sed0022010 Sechium edule
SEGI_11132 Sequoiadendron giganteum
SEGI_16698 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14805 Striga asiatica
SHI09679 Sapria himalayana
SHI09685 Sapria himalayana
SMO364G0531 Selaginella moellendorffii
Solyc03g120350.3 Solanum lycopersicum
Solyc06g066790.3 Solanum lycopersicum
Sopen03g039240 Solanum pennellii
Sopen06g025070 Solanum pennellii
Sp5g35400 Schrenkiella parvula
TAR383G0846 Trochodendron aralioides
TAR624G0871 Trochodendron aralioides
THA.LOC104808208 Tarenaya hassleriana
THA.LOC104812472 Tarenaya hassleriana
THA.LOC104813572 Tarenaya hassleriana
Thecc.06G082500 Theobroma cacao
Thhalv10018100m.g Eutrema salsugineum
TPR.G24164 Trifolium pratense
TPR.G37235 Trifolium pratense
TWI12G0585 Tripterygium wilfordii
TWI75G0487 Tripterygium wilfordii
unitig_21.g20350 Utricularia gibba
vmacro18935 Vaccinium macrocarpon
VMungo0331G1773 Vigna mungo
VMungo1080G1114 Vigna mungo
Zm00001eb159790 Zea mays

User provided reference genes

Program Settings