Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07840 Brassica napus
A10p15940 Brassica napus
Aa31LG11G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.214 Anthoceros agrestis
Actinidia11491 Actinidia chinensis
Actinidia11631 Actinidia chinensis
Actinidia20802 Actinidia chinensis
Actinidia23155 Actinidia chinensis
Actinidia28544 Actinidia chinensis
Ah.08g213050 Amaranthus hybridus
Ah.15g093230 Amaranthus hybridus
AL8G34390 Arabidopsis lyrata
Aqoxy4G03298 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4J21RI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SFIU4Y Arachis hypogaea
AT5G58290 Arabidopsis thaliana
ATR1127G188 Amborella trichopoda
Atru.chr10.2348 Acer truncatum
AUR62008629 Chenopodium quinoa
AUR62033142 Chenopodium quinoa
BcaB05g22417 Brassica carinata
BcaB08g36168 Brassica carinata
BcaC03g14109 Brassica carinata
BcaC04g19879 Brassica carinata
BolC2t07460H Brassica oleracea
BolC3t13889H Brassica oleracea
BolC9t57875H Brassica oleracea
BraA02t05857Z Brassica rapa
BraA03t10544Z Brassica rapa
BraA10t43630Z Brassica rapa
C02p13480 Brassica napus
C09p50190 Brassica napus
CAN.G181.23 Capsicum annuum
CAN.G874.66 Capsicum annuum
CANSAT54G1201 Cannabis sativa
CANSAT54G1601 Cannabis sativa
CARHR272100 Cardamine hirsuta
Carub.0008s1883 Capsella rubella
Ca_15074_v3 Cicer arietinum L.
CBR_g34243 Chara braunii
Cc01_g15400 Coffea canephora
Cc08_g06290 Coffea canephora
CDE04G0920 Ceratophyllum demersum
CDE04G3635 Ceratophyllum demersum
CDE12G0267 Ceratophyllum demersum
CDE12G0910 Ceratophyllum demersum
Cfa011847 Carpinus fangiana
Cfa022806 Carpinus fangiana
Ciclev10003767m.g Citrus clementina
CiPaw.13G062200 Carya illinoinensis
CiPaw.14G049200 Carya illinoinensis
ClCG02G019000 Citrullus lanatus
COL.COLO4_20465 Corchorus olitorius
COL.COLO4_25839 Corchorus olitorius
Cpa.g.sc2.273 Carica papaya
Cre09.g402450 Chlamydomonas reinhardtii
CsaV3_6G013170 Cucumis sativus L.
CSS0011879 Camellia sinensis var. sinensis
CSS0043566 Camellia sinensis var. sinensis
DCAR_006280 Daucus carota
Dinv16950 Davidia involucrata
Dinv25361 Davidia involucrata
Dinv28747 Davidia involucrata
Duzib114G0918 Durio zibethinus
Duzib128G1258 Durio zibethinus
ECA236G0481 Erigeron canadensis
ECA247G1326 Erigeron canadensis
EL10Ac7g17466 Beta vulgaris
Eucgr.B04032 Eucalyptus grandis
FAN01G2652 Fragaria x ananassa
FAN03G1913 Fragaria x ananassa
FAN06G3988 Fragaria x ananassa
FAN10G0861 Fragaria x ananassa
FAN11G1333 Fragaria x ananassa
FAN16G0778 Fragaria x ananassa
FAN21G0514 Fragaria x ananassa
FvH4_3g40850 Fragaria vesca
FvH4_7g03250 Fragaria vesca
Glyma.11G199900 Glycine max
Glyma.11G200000 Glycine max
Glyma.18G050900 Glycine max
Gohir.A09G170901 Gossypium hirsutum
Gohir.A13G010200 Gossypium hirsutum
Gohir.D09G166600 Gossypium hirsutum
Gohir.D13G011100 Gossypium hirsutum
Gorai.006G188400 Gossypium raimondii
Gorai.013G011900 Gossypium raimondii
GSVIVG01024544001 Vitis vinifera
HanXRQChr06g0182431 Helianthus annuus
HanXRQChr08g0230211 Helianthus annuus
Haze_24483 Corylus avellana
Haze_26584 Corylus avellana
Hma1.2p1_0161F.1_g072070 Hydrangea macrophylla
Hma1.2p1_0174F.1_g076720 Hydrangea macrophylla
HPP92_019047 Vanilla planifolia
HPP92_019753 Vanilla planifolia
HPP92_019754 Vanilla planifolia
Hund05423 Selenicereus undatus
Hund18154 Selenicereus undatus
Lalb_Chr10g0103861 Lupinus albus
Lalb_Chr17g0345661 Lupinus albus
Lalb_Chr18g0054101 Lupinus albus
Lalb_Chr20g0117301 Lupinus albus
Lj1A113G50 Lonicera japonica
Lj3C939G10 Lonicera japonica
Lj4g0016772 Lotus japonicus
Lj6g0020148 Lotus japonicus
Lsat_1_v5_gn_5_177280 Lactuca sativa
Lsat_1_v5_gn_8_99721 Lactuca sativa
Manes.08G161520 Manihot esculenta
Manes.09G000500 Manihot esculenta
Mapoly0008s0139 Marchantia polymorpha
MBI15_g32282_MAGBIO Magnolia biondii
MCO05G594 Micromonas commoda
MD03G1049000 Malus domestica
MD05G1031100 Malus domestica
MD11G1051500 Malus domestica
Medtr3g062510 Medicago truncatula
MELO3C019587.2 Cucumis melo
Migut.D00810 Erythranthe guttata
Migut.N00715 Erythranthe guttata
MSTRG.18535 Avicennia marina
MSTRG.21263 Avicennia marina
Nitab4.5_0000105g0310 Nicotiana tabacum
Nitab4.5_0000586g0050 Nicotiana tabacum
Nitab4.5_0000586g0060 Nicotiana tabacum
Nitab4.5_0002902g0100 Nicotiana tabacum
Nitab4.5_0003194g0060 Nicotiana tabacum
Nitab4.5_0003941g0030 Nicotiana tabacum
Nitab4.5_0005087g0030 Nicotiana tabacum
Nn2g10243 Nelumbo nucifera
Nn5g26803 Nelumbo nucifera
Oeu011395.1 Olea europaea
Oeu022883.1 Olea europaea
Oeu026937.1 Olea europaea
Oeu030101.1 Olea europaea
Os02g0325100 Oryza sativa ssp. japonica
Peaxi162Scf00131g00122 Petunia axillaris
Peaxi162Scf00737g00411 Petunia axillaris
PGR042G3396 Punica granatum
PGSC0003DMG400002408 Solanum tuberosum
PGSC0003DMG400020570 Solanum tuberosum
PGSC0003DMG400030476 Solanum tuberosum
Phvul.006G080300 Phaseolus vulgaris
Potri.006G031000 Populus trichocarpa
Potri.016G028000 Populus trichocarpa
Pp3c14_12590 Physcomitrium patens
Pp3c14_8440 Physcomitrium patens
Pp3c1_38560 Physcomitrium patens
Pp3c2_1850 Physcomitrium patens
PRCOL_00001451 Prasinoderma coloniale
Prupe.6G039300 Prunus persica
Psat2g090520 Pisum sativum
Psat4g121600 Pisum sativum
Psat5g146000 Pisum sativum
PSO339G0051 Papaver somniferum
PSO384G2110 Papaver somniferum
PSO832G0732 Papaver somniferum
QL01p024313 Quercus lobata
RcHm_v2.0_Chr1g0325371 Rosa chinensis
RcHm_v2.0_Chr5g0073581 Rosa chinensis
Rhsim13G0058000 Rhododendron simsii
Sabra06G0020800 Salix brachista
Sabra16G0032400 Salix brachista
SalBow2G3044 Salvia bowleyana
SalBow5G1257 Salvia bowleyana
Sc21g0004830 Simmondsia chinensis
Sed0002106 Sechium edule
Sed0003519 Sechium edule
SEGI_27476 Sequoiadendron giganteum
SGA_v2.0_scaffold120G32999 Striga asiatica
SGA_v2.0_scaffold77G25347 Striga asiatica
SMO275G0036 Selaginella moellendorffii
SMO304G0022 Selaginella moellendorffii
SMO304G0036 Selaginella moellendorffii
SMO304G0121 Selaginella moellendorffii
SMO367G0588 Selaginella moellendorffii
Solyc06g082630.4 Solanum lycopersicum
Solyc06g082660.4 Solanum lycopersicum
Sopen06g034030 Solanum pennellii
Sopen06g034050 Solanum pennellii
Sp6g19940 Schrenkiella parvula
TAR369G0965 Trochodendron aralioides
TAR633G0181 Trochodendron aralioides
TAR636G1869 Trochodendron aralioides
TAR636G2320 Trochodendron aralioides
THA.LOC104814926 Tarenaya hassleriana
THA.LOC104823340 Tarenaya hassleriana
Thecc.10G111300 Theobroma cacao
Thecc.10G111600 Theobroma cacao
Thhalv10013708m.g Eutrema salsugineum
Thhalv10027786m.g Eutrema salsugineum
TPR.G13897 Trifolium pratense
TPR.G23888 Trifolium pratense
TWI31G0366 Tripterygium wilfordii
unitig_0.g2148 Utricularia gibba
unitig_747.g21441 Utricularia gibba
vmacro02865 Vaccinium macrocarpon
vmacro08952 Vaccinium macrocarpon
vmacro08953 Vaccinium macrocarpon
VMungo0540G2104 Vigna mungo
Zm00001eb181160 Zea mays
Zm00001eb236650 Zea mays

User provided reference genes

Program Settings