Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p29700 Brassica napus
A10p31900 Brassica napus
Aa31LG1G21100 Aethionema arabicum
Aa31sc40G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3569 Anthoceros agrestis
Actinidia06742 Actinidia chinensis
Actinidia17282 Actinidia chinensis
Actinidia38589 Actinidia chinensis
AL6G13880 Arabidopsis lyrata
AL6G16780 Arabidopsis lyrata
Aqoxy1G00138 Aquilegia oxysepala
Aqoxy2G01795 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A87VPW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYTW4X Arachis hypogaea
AT5G04260 Arabidopsis thaliana
AT5G06690 Arabidopsis thaliana
ATR0598G227 Amborella trichopoda
ATR0680G138 Amborella trichopoda
Atru.chr12.828 Acer truncatum
Atru.chr8.1147 Acer truncatum
AUR62011997 Chenopodium quinoa
AUR62015344 Chenopodium quinoa
BcaC06g32129 Brassica carinata
BcaC06g32385 Brassica carinata
BcaC06g32553 Brassica carinata
BolC1t02443H Brassica oleracea
BolC9t59750H Brassica oleracea
BolC9t60001H Brassica oleracea
BraA10t45011Z Brassica rapa
BraA10t45234Z Brassica rapa
C01p24990 Brassica napus
C09p70070 Brassica napus
C09p72610 Brassica napus
CAN.G321.39 Capsicum annuum
CAN.G960.9 Capsicum annuum
CANSAT64G0867 Cannabis sativa
CARHR206510 Cardamine hirsuta
CARHR209020 Cardamine hirsuta
Carub.0006s0321 Capsella rubella
Carub.0006s0557 Capsella rubella
CBR_g38472 Chara braunii
Cc02_g11050 Coffea canephora
Cc06_g15720 Coffea canephora
CDE05G3298 Ceratophyllum demersum
CDE11G0607 Ceratophyllum demersum
CDE11G1023 Ceratophyllum demersum
Ciclev10012859m.g Citrus clementina
Ciclev10032804m.g Citrus clementina
CiPaw.01G270000 Carya illinoinensis
CiPaw.09G029200 Carya illinoinensis
ClCG04G002040 Citrullus lanatus
ClCG05G021170 Citrullus lanatus
COL.COLO4_29346 Corchorus olitorius
Cpa.g.sc53.111 Carica papaya
Cpa.g.sc85.59 Carica papaya
CsaV3_4G030690 Cucumis sativus L.
CsaV3_5G036090 Cucumis sativus L.
CSS0007113 Camellia sinensis var. sinensis
CSS0017710 Camellia sinensis var. sinensis
CSS0028495 Camellia sinensis var. sinensis
CSS0049751 Camellia sinensis var. sinensis
DCAR_019092 Daucus carota
DCAR_019851 Daucus carota
Dinv24058 Davidia involucrata
Dinv31216 Davidia involucrata
Dinv36406 Davidia involucrata
Duzib093G1666 Durio zibethinus
Duzib114G0224 Durio zibethinus
ECA232G0110 Erigeron canadensis
EL10Ac3g06893 Beta vulgaris
Eucgr.A02464 Eucalyptus grandis
Eucgr.J01067 Eucalyptus grandis
FAN01G0418 Fragaria x ananassa
FAN02G3918 Fragaria x ananassa
FAN03G3169 Fragaria x ananassa
FAN05G0108 Fragaria x ananassa
FAN06G1076 Fragaria x ananassa
FAN06G4627 Fragaria x ananassa
FAN10G1005 Fragaria x ananassa
FAN10G4229 Fragaria x ananassa
FAN14G5308 Fragaria x ananassa
FvH4_6g22000 Fragaria vesca
FvH4_7g18880 Fragaria vesca
Glyma.02G161200 Glycine max
Glyma.03G146000 Glycine max
Glyma.19G149200 Glycine max
Gohir.A04G051800 Gossypium hirsutum
Gohir.A05G294600 Gossypium hirsutum
Gohir.D04G089600 Gossypium hirsutum
Gohir.D05G295200 Gossypium hirsutum
Gorai.009G311900 Gossypium raimondii
Gorai.012G099700 Gossypium raimondii
GSVIVG01016235001 Vitis vinifera
GSVIVG01033478001 Vitis vinifera
HanXRQChr01g0010601 Helianthus annuus
HanXRQChr09g0246861 Helianthus annuus
HanXRQChr13g0390541 Helianthus annuus
Haze_16847 Corylus avellana
Haze_20011 Corylus avellana
Hma1.2p1_0438F.1_g153110 Hydrangea macrophylla
Hma1.2p1_1478F.1_g285970 Hydrangea macrophylla
HPP92_004382 Vanilla planifolia
HPP92_020760 Vanilla planifolia
Hund19208 Selenicereus undatus
Hund24798 Selenicereus undatus
Lalb_Chr15g0079071 Lupinus albus
Lalb_Chr21g0313761 Lupinus albus
Lj1g0027959 Lotus japonicus
Lj2A18T48 Lonicera japonica
Lj2A365T91 Lonicera japonica
Lj6g0007833 Lotus japonicus
Lsat_1_v5_gn_5_164480 Lactuca sativa
Lsat_1_v5_gn_9_68280 Lactuca sativa
Manes.09G036900 Manihot esculenta
Manes.10G049200 Manihot esculenta
Mapoly0058s0054 Marchantia polymorpha
Mapoly0073s0015 Marchantia polymorpha
MBI19_g17415_MAGBIO Magnolia biondii
MD01G1104800 Malus domestica
MD12G1055400 Malus domestica
MD14G1054800 Malus domestica
Medtr1g050322 Medicago truncatula
Medtr7g093490 Medicago truncatula
MELO3C008932.2 Cucumis melo
MELO3C012410.2 Cucumis melo
Migut.F01723 Erythranthe guttata
Migut.J01849 Erythranthe guttata
MSTRG.8135 Avicennia marina
Nitab4.5_0000105g0200 Nicotiana tabacum
Nitab4.5_0002343g0020 Nicotiana tabacum
Nitab4.5_0004325g0060 Nicotiana tabacum
Nitab4.5_0004385g0010 Nicotiana tabacum
Nn2g11556 Nelumbo nucifera
Nn2g13758 Nelumbo nucifera
Nn7g35983 Nelumbo nucifera
Os02g0774100 Oryza sativa ssp. japonica
Os02g0819200 Oryza sativa ssp. japonica
Peaxi162Scf00003g04536 Petunia axillaris
Peaxi162Scf00296g00715 Petunia axillaris
PGR004G2598 Punica granatum
PGSC0003DMG400007425 Solanum tuberosum
PGSC0003DMG400011420 Solanum tuberosum
Phvul.001G143700 Phaseolus vulgaris
Phvul.007G239200 Phaseolus vulgaris
Potri.008G036400 Populus trichocarpa
Potri.010G225701 Populus trichocarpa
Potri.016G059500 Populus trichocarpa
Pp3c3_24530 Physcomitrium patens
Pp3c4_20740 Physcomitrium patens
PRCOL_00000941 Prasinoderma coloniale
Prupe.2G210100 Prunus persica
Prupe.7G079900 Prunus persica
Psat0s1815g0040 Pisum sativum
Psat6g094000 Pisum sativum
PSO339G1966 Papaver somniferum
PSO339G5755 Papaver somniferum
PSO384G4474 Papaver somniferum
PSO801G0679 Papaver somniferum
QL07p024266 Quercus lobata
QL08p054943 Quercus lobata
RcHm_v2.0_Chr1g0362831 Rosa chinensis
RcHm_v2.0_Chr3g0479301 Rosa chinensis
Rhsim03G0117200 Rhododendron simsii
Rhsim04G0095100 Rhododendron simsii
Rhsim04G0095900 Rhododendron simsii
Sabra08G0024500 Salix brachista
Sabra16G0062300 Salix brachista
SalBow6G4679 Salvia bowleyana
Sc06g0007530 Simmondsia chinensis
Sed0000333 Sechium edule
Sed0027853 Sechium edule
SEGI_17685 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30497 Striga asiatica
SGA_v2.0_scaffold51G18707 Striga asiatica
SMO265G0009 Selaginella moellendorffii
SMO296G0030 Selaginella moellendorffii
Solyc11g008450.2 Solanum lycopersicum
Sopen10g029540 Solanum pennellii
Sopen11g004240 Solanum pennellii
Sp6g36180 Schrenkiella parvula
Sp6g38490 Schrenkiella parvula
TAR369G0094 Trochodendron aralioides
TAR369G0996 Trochodendron aralioides
TAR623G0399 Trochodendron aralioides
TAR623G0928 Trochodendron aralioides
THA.LOC104799287 Tarenaya hassleriana
THA.LOC104816424 Tarenaya hassleriana
Thecc.05G174200 Theobroma cacao
Thecc.10G079700 Theobroma cacao
Thhalv10009806m.g Eutrema salsugineum
Thhalv10014762m.g Eutrema salsugineum
Thhalv10015512m.g Eutrema salsugineum
TPR.G10648 Trifolium pratense
TPR.G35788 Trifolium pratense
TWI53G1909 Tripterygium wilfordii
TWI63G0314 Tripterygium wilfordii
unitig_578.g16265 Utricularia gibba
vmacro07125 Vaccinium macrocarpon
vmacro09125 Vaccinium macrocarpon
vmacro22988 Vaccinium macrocarpon
VMungo1383G3238 Vigna mungo
Zm00001eb193260 Zea mays
Zm00001eb256520 Zea mays
Zm00001eb259040 Zea mays

User provided reference genes

Program Settings