Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p19610 Brassica napus
A05p10050 Brassica napus
Aa31LG5G14880 Aethionema arabicum
Aa31LG5G19350 Aethionema arabicum
Aa31LG9G15920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3370 Anthoceros agrestis
Actinidia05606 Actinidia chinensis
Actinidia07573 Actinidia chinensis
Actinidia28877 Actinidia chinensis
Actinidia39443 Actinidia chinensis
Actinidia39444 Actinidia chinensis
Actinidia39445 Actinidia chinensis
Actinidia39446 Actinidia chinensis
Ah.09g235790 Amaranthus hybridus
Ah.09g235800 Amaranthus hybridus
Ah.14g089230 Amaranthus hybridus
AL4G31700 Arabidopsis lyrata
AL8G20640 Arabidopsis lyrata
Aqoxy1G02582 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q9T26T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XI7UL2 Arachis hypogaea
AT2G35630 Arabidopsis thaliana
ATR0582G149 Amborella trichopoda
ATR0589G051 Amborella trichopoda
ATR0589G098 Amborella trichopoda
ATR0757G041 Amborella trichopoda
ATR0929G001 Amborella trichopoda
ATR1081G001 Amborella trichopoda
ATR1098G084 Amborella trichopoda
ATR1127G018 Amborella trichopoda
Atru.chr10.646 Acer truncatum
AUR62014778 Chenopodium quinoa
AUR62016965 Chenopodium quinoa
BcaB01g03895 Brassica carinata
BcaB02g09406 Brassica carinata
BcaC02g11684 Brassica carinata
BolC3t14686H Brassica oleracea
BolC4t22889H Brassica oleracea
BraA03t11214Z Brassica rapa
BraA05t19946Z Brassica rapa
C03p22870 Brassica napus
C04p12410 Brassica napus
CAN.G1627.24 Capsicum annuum
CANSAT21G2414 Cannabis sativa
CARHR129850 Cardamine hirsuta
Carub.0004s1734 Capsella rubella
Ca_10540_v3 Cicer arietinum L.
CBR_g39205 Chara braunii
Cc02_g12860 Coffea canephora
Cc02_g12870 Coffea canephora
CDE05G2722 Ceratophyllum demersum
CDE05G3196 Ceratophyllum demersum
Cfa000747 Carpinus fangiana
Cfa027164 Carpinus fangiana
Ciclev10014013m.g Citrus clementina
CiPaw.07G217200 Carya illinoinensis
CiPaw.08G016100 Carya illinoinensis
ClCG01G025480 Citrullus lanatus
COL.COLO4_22862 Corchorus olitorius
Cpa.g.c36687 Carica papaya
Cpa.g.sc192.7 Carica papaya
Cpa.g.sc192.9 Carica papaya
Cre03.g149800 Chlamydomonas reinhardtii
CsaV3_6G052730 Cucumis sativus L.
CSS0019100 Camellia sinensis var. sinensis
DCAR_004114 Daucus carota
Dinv07524 Davidia involucrata
Dinv07525 Davidia involucrata
Dinv40531 Davidia involucrata
Duzib160G0039 Durio zibethinus
ECA236G2885 Erigeron canadensis
ECA248G2919 Erigeron canadensis
EL10Ac4g08203 Beta vulgaris
EL10Ac8g20329 Beta vulgaris
Eucgr.D00654 Eucalyptus grandis
Eucgr.D00655 Eucalyptus grandis
Eucgr.F03893 Eucalyptus grandis
FAN01G0441 Fragaria x ananassa
FAN03G0871 Fragaria x ananassa
FAN10G0813 Fragaria x ananassa
FAN10G3833 Fragaria x ananassa
FvH4_7g33390 Fragaria vesca
Glyma.10G207500 Glycine max
Glyma.20G183400 Glycine max
Gohir.A05G113200 Gossypium hirsutum
Gohir.D05G113700 Gossypium hirsutum
Gorai.009G117700 Gossypium raimondii
GSVIVG01002244001 Vitis vinifera
GSVIVG01006792001 Vitis vinifera
HanXRQChr04g0123991 Helianthus annuus
HanXRQChr13g0393551 Helianthus annuus
Haze_05987 Corylus avellana
Hma1.2p1_0617F.1_g190130 Hydrangea macrophylla
Hma1.2p1_0664F.1_g198970 Hydrangea macrophylla
Hma1.2p1_1971F.1_g309590 Hydrangea macrophylla
HPP92_018014 Vanilla planifolia
HPP92_018074 Vanilla planifolia
HPP92_026673 Vanilla planifolia
Hund21252 Selenicereus undatus
Hund23686 Selenicereus undatus
Lalb_Chr02g0152081 Lupinus albus
Lalb_Chr21g0313501 Lupinus albus
Lalb_Chr21g0313511 Lupinus albus
Lalb_Chr21g0313521 Lupinus albus
Lalb_Chr21g0313661 Lupinus albus
Lj1A1209T60 Lonicera japonica
Lj1C1209G5 Lonicera japonica
Lj1g0001052 Lotus japonicus
Lj2A285G52 Lonicera japonica
Lj2C285G5 Lonicera japonica
Lj2C285T4 Lonicera japonica
Lj5g0002534 Lotus japonicus
Lj6g0005213 Lotus japonicus
Lsat_1_v5_gn_2_57060 Lactuca sativa
Lsat_1_v5_gn_5_24520 Lactuca sativa
Lsat_1_v5_gn_6_24900 Lactuca sativa
Lsat_1_v5_gn_7_18120 Lactuca sativa
Lsat_1_v5_gn_7_19361 Lactuca sativa
Lsat_1_v5_gn_7_48800 Lactuca sativa
Lsat_1_v5_gn_8_115100 Lactuca sativa
Lsat_1_v5_gn_8_117380 Lactuca sativa
Lsat_1_v5_gn_8_88460 Lactuca sativa
Lsat_1_v5_gn_8_88480 Lactuca sativa
Manes.16G062100 Manihot esculenta
Mapoly0009s0135 Marchantia polymorpha
MBI01_g10024_MAGBIO Magnolia biondii
MBI11_g20421_MAGBIO Magnolia biondii
MBI12_g46554_MAGBIO Magnolia biondii
MBI13_g10046_MAGBIO Magnolia biondii
MBI14_g43769_MAGBIO Magnolia biondii
MBI19_g04166_MAGBIO Magnolia biondii
MBI19_g04169_MAGBIO Magnolia biondii
MBI19_g16739_MAGBIO Magnolia biondii
MCO15G118 Micromonas commoda
MD01G1232200 Malus domestica
MD07G1271900 Malus domestica
MD07G1304000 Malus domestica
Medtr1g094165 Medicago truncatula
Medtr8g023010 Medicago truncatula
Medtr8g026860 Medicago truncatula
Medtr8g027640 Medicago truncatula
MELO3C007036.2 Cucumis melo
Migut.M01176 Erythranthe guttata
MSTRG.15909 Avicennia marina
MSTRG.7313 Avicennia marina
Nitab4.5_0003063g0010 Nicotiana tabacum
Nitab4.5_0009488g0020 Nicotiana tabacum
Nn012s41459 Nelumbo nucifera
Nn1g03998 Nelumbo nucifera
Nn1g06636 Nelumbo nucifera
Oeu004743.1 Olea europaea
Oeu043710.2 Olea europaea
Oeu043712.2 Olea europaea
Os01g0816400 Oryza sativa ssp. japonica
Os01g0816500 Oryza sativa ssp. japonica
Peaxi162Scf00524g00056 Petunia axillaris
PGR004G1771 Punica granatum
Phvul.007G099200 Phaseolus vulgaris
Potri.001G443200 Populus trichocarpa
Potri.011G153700 Populus trichocarpa
Pp3c15_23870 Physcomitrium patens
Pp3c7_1820 Physcomitrium patens
Pp3c9_24390 Physcomitrium patens
PRCOL_00006063 Prasinoderma coloniale
Prupe.1G083500 Prunus persica
Psat6g181080 Pisum sativum
PSO541G4457 Papaver somniferum
QL05p065250 Quercus lobata
RcHm_v2.0_Chr1g0383361 Rosa chinensis
Rhsim02G0123500 Rhododendron simsii
Rhsim07G0137600 Rhododendron simsii
Rhsim10G0085900 Rhododendron simsii
Rhsim10G0093300 Rhododendron simsii
RhsimUnG0043500 Rhododendron simsii
RhsimUnG0099400 Rhododendron simsii
Sabra11G0146000 Salix brachista
Sabra16G0299900 Salix brachista
Sabra16G0301500 Salix brachista
SalBow8G3229 Salvia bowleyana
Sc17g0006350 Simmondsia chinensis
Sed0013080 Sechium edule
SEGI_02636 Sequoiadendron giganteum
SEGI_16535 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29641 Striga asiatica
SGA_v2.0_scaffold22G09771 Striga asiatica
SHI23474 Sapria himalayana
SHI23481 Sapria himalayana
SHI23485 Sapria himalayana
SMO230G0112 Selaginella moellendorffii
Solyc02g078640.3 Solanum lycopersicum
Sopen02g023500 Solanum pennellii
Sp4g17870 Schrenkiella parvula
TAR624G0538 Trochodendron aralioides
TAR626G1549 Trochodendron aralioides
THA.LOC104798541 Tarenaya hassleriana
Thecc.06G016700 Theobroma cacao
Thhalv10016124m.g Eutrema salsugineum
TPR.G10297 Trifolium pratense
TPR.G21592 Trifolium pratense
TPR.G36198 Trifolium pratense
TWI32G1048 Tripterygium wilfordii
TWI60G0805 Tripterygium wilfordii
unitig_37.g12343 Utricularia gibba
unitig_46.g18629 Utricularia gibba
vmacro15889 Vaccinium macrocarpon
Zm00001eb149800 Zea mays
Zm00001eb369050 Zea mays
Zm00001eb390200 Zea mays

User provided reference genes

Program Settings