Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06320 Brassica napus
A01p06340 Brassica napus
A03p61110 Brassica napus
A09p55830 Brassica napus
Aa31sc100G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.736 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1528 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.934 Anthoceros agrestis
Actinidia13200 Actinidia chinensis
Actinidia14609 Actinidia chinensis
Actinidia16922 Actinidia chinensis
Actinidia22305 Actinidia chinensis
Actinidia22306 Actinidia chinensis
Actinidia22307 Actinidia chinensis
Ah.10g035570 Amaranthus hybridus
Ah.16g104930 Amaranthus hybridus
AL4G16380 Arabidopsis lyrata
AL7G19990 Arabidopsis lyrata
AL7G20000 Arabidopsis lyrata
Aqoxy2G02630 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QU94QB Arachis hypogaea
AT2G25170 Arabidopsis thaliana
AT4G31900 Arabidopsis thaliana
ATR1136G106 Amborella trichopoda
ATR1153G016 Amborella trichopoda
Atru.chr7.2524 Acer truncatum
Atru.chr7.2525 Acer truncatum
AUR62012463 Chenopodium quinoa
AUR62031587 Chenopodium quinoa
BcaB08g35151 Brassica carinata
BcaC07g40886 Brassica carinata
BcaC09g51981 Brassica carinata
BcaC09g51983 Brassica carinata
BolC1t00694H Brassica oleracea
BolC1t00695H Brassica oleracea
BolC7t46345H Brassica oleracea
BolC8t51453H Brassica oleracea
BraA01t00598Z Brassica rapa
BraA01t00599Z Brassica rapa
BraA03t15150Z Brassica rapa
BraA09t40986Z Brassica rapa
C01p06980 Brassica napus
C01p07000 Brassica napus
C07p58980 Brassica napus
C08p38830 Brassica napus
CAN.G199.65 Capsicum annuum
CAN.G36.11 Capsicum annuum
CARHR116490 Cardamine hirsuta
Carub.0004s0475 Capsella rubella
Carub.0007s0864 Capsella rubella
Ca_13055_v3 Cicer arietinum L.
Ca_15766_v3 Cicer arietinum L.
Ca_30191_v3 Cicer arietinum L.
CBR_g16815 Chara braunii
CBR_g47133 Chara braunii
Cc08_g00060 Coffea canephora
CDE06G2391 Ceratophyllum demersum
Ciclev10010331m.g Citrus clementina
CiPaw.08G007100 Carya illinoinensis
ClCG05G016460 Citrullus lanatus
COL.COLO4_18936 Corchorus olitorius
COL.COLO4_18937 Corchorus olitorius
COL.COLO4_18938 Corchorus olitorius
Cpa.g.sc127.15 Carica papaya
Cre03.g158550 Chlamydomonas reinhardtii
Cre08.g377200 Chlamydomonas reinhardtii
CsaV3_4G036700 Cucumis sativus L.
CSS0003293 Camellia sinensis var. sinensis
CSS0021251 Camellia sinensis var. sinensis
CSS0029706 Camellia sinensis var. sinensis
CSS0032982 Camellia sinensis var. sinensis
CSS0037562 Camellia sinensis var. sinensis
DCAR_003002 Daucus carota
DCAR_007677 Daucus carota
Dinv16472 Davidia involucrata
Duzib150G0247 Durio zibethinus
Duzib187G0747 Durio zibethinus
ECA248G2891 Erigeron canadensis
EL10Ac2g04134 Beta vulgaris
Eucgr.G00556 Eucalyptus grandis
FAN15G1888 Fragaria x ananassa
FAN20G0395 Fragaria x ananassa
FAN20G2022 Fragaria x ananassa
FAN26G0509 Fragaria x ananassa
FAN27G0005 Fragaria x ananassa
FvH4_2g40920 Fragaria vesca
Glyma.04G062400 Glycine max
Glyma.06G063400 Glycine max
Glyma.17G217300 Glycine max
Gohir.A07G031300 Gossypium hirsutum
Gohir.A13G179800 Gossypium hirsutum
Gohir.D07G035100 Gossypium hirsutum
Gohir.D13G187900 Gossypium hirsutum
Gorai.001G036900 Gossypium raimondii
Gorai.010G244100 Gossypium raimondii
GSVIVG01035901001 Vitis vinifera
HanXRQChr01g0030671 Helianthus annuus
HanXRQChr01g0030691 Helianthus annuus
HanXRQChr11g0353801 Helianthus annuus
Haze_21436 Corylus avellana
Haze_26150 Corylus avellana
Haze_26554 Corylus avellana
Hma1.2p1_0392F.1_g143010 Hydrangea macrophylla
HPP92_004609 Vanilla planifolia
HPP92_004610 Vanilla planifolia
HPP92_004615 Vanilla planifolia
Hund03464 Selenicereus undatus
Hund19597 Selenicereus undatus
Lalb_Chr08g0244361 Lupinus albus
Lalb_Chr22g0361401 Lupinus albus
Lalb_Chr23g0268291 Lupinus albus
Lalb_Chr24g0402041 Lupinus albus
Lj1g0020904 Lotus japonicus
Lj7A730T43 Lonicera japonica
Lsat_1_v5_gn_1_42900 Lactuca sativa
Manes.03G010400 Manihot esculenta
Manes.16G127700 Manihot esculenta
Mapoly0001s0194 Marchantia polymorpha
Mapoly0010s0012 Marchantia polymorpha
Mapoly0025s0016 Marchantia polymorpha
MBI03_g00429_MAGBIO Magnolia biondii
MCO06G219 Micromonas commoda
MCO14G002 Micromonas commoda
MD08G1058800 Malus domestica
MD15G1037700 Malus domestica
Medtr1g013190 Medicago truncatula
Medtr3g106210 Medicago truncatula
MELO3C016973.2 Cucumis melo
MELO3C023849.2 Cucumis melo
Migut.A00006 Erythranthe guttata
MSTRG.11592 Avicennia marina
Nitab4.5_0000486g0100 Nicotiana tabacum
Nitab4.5_0000486g0110 Nicotiana tabacum
Nitab4.5_0002503g0110 Nicotiana tabacum
Nitab4.5_0002973g0030 Nicotiana tabacum
Nitab4.5_0002973g0050 Nicotiana tabacum
Nitab4.5_0003811g0020 Nicotiana tabacum
Nn2g10435 Nelumbo nucifera
Nn2g12306 Nelumbo nucifera
Oeu000758.1 Olea europaea
Oeu000760.1 Olea europaea
Oeu012636.1 Olea europaea
Oeu056768.1 Olea europaea
Os01g0881000 Oryza sativa ssp. japonica
Os06g0183800 Oryza sativa ssp. japonica
Peaxi162Scf00430g00415 Petunia axillaris
Peaxi162Scf00632g00012 Petunia axillaris
PGR044G1954 Punica granatum
PGSC0003DMG400014840 Solanum tuberosum
PGSC0003DMG400026094 Solanum tuberosum
Phvul.001G046100 Phaseolus vulgaris
Phvul.009G088700 Phaseolus vulgaris
Potri.006G262200 Populus trichocarpa
Potri.018G021100 Populus trichocarpa
Pp3c10_2280 Physcomitrium patens
Pp3c14_2650 Physcomitrium patens
Pp3c15_6140 Physcomitrium patens
Pp3c18_19040 Physcomitrium patens
Pp3c18_19045 Physcomitrium patens
Pp3c20_11500 Physcomitrium patens
Pp3c21_10800 Physcomitrium patens
PRCOL_00003109 Prasinoderma coloniale
PRCOL_00004608 Prasinoderma coloniale
PRCOL_00007031 Prasinoderma coloniale
Prupe.1G391600 Prunus persica
Psat5g031880 Pisum sativum
Psat6g027200 Pisum sativum
Psat7g086320 Pisum sativum
PSO339G0671 Papaver somniferum
PSO384G0886 Papaver somniferum
QL02p019684 Quercus lobata
RcHm_v2.0_Chr3g0455421 Rosa chinensis
RcHm_v2.0_Chr3g0495041 Rosa chinensis
RcHm_v2.0_Chr6g0299661 Rosa chinensis
Rhsim02G0208200 Rhododendron simsii
Rhsim07G0163100 Rhododendron simsii
Rhsim07G0163200 Rhododendron simsii
Sabra06G0204500 Salix brachista
Sabra18G0023400 Salix brachista
Sc09g0010480 Simmondsia chinensis
Sed0013682 Sechium edule
Sed0022321 Sechium edule
SEGI_08777 Sequoiadendron giganteum
SEGI_11355 Sequoiadendron giganteum
SEGI_27514 Sequoiadendron giganteum
SEGI_33990 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09081 Striga asiatica
SHI14539 Sapria himalayana
SMO141G0267 Selaginella moellendorffii
SMO200G0085 Selaginella moellendorffii
SMO228G0183 Selaginella moellendorffii
Solyc06g065730.3 Solanum lycopersicum
Solyc08g029130.3 Solanum lycopersicum
Sopen06g024260 Solanum pennellii
Sopen08g010020 Solanum pennellii
Sp4g04150 Schrenkiella parvula
Sp7g29720 Schrenkiella parvula
TAR625G0155 Trochodendron aralioides
THA.LOC104803635 Tarenaya hassleriana
THA.LOC104803854 Tarenaya hassleriana
THA.LOC104804837 Tarenaya hassleriana
THA.LOC104804839 Tarenaya hassleriana
Thecc.09G017400 Theobroma cacao
Thhalv10000014m.g Eutrema salsugineum
Thhalv10027006m.g Eutrema salsugineum
TPR.G10942 Trifolium pratense
TPR.G25705 Trifolium pratense
TPR.G26726 Trifolium pratense
TPR.G3131 Trifolium pratense
TPR.G38867 Trifolium pratense
TPR.G38889 Trifolium pratense
TPR.G38898 Trifolium pratense
TWI32G0850 Tripterygium wilfordii
TWI32G1204 Tripterygium wilfordii
TWI63G1656 Tripterygium wilfordii
vmacro05139 Vaccinium macrocarpon
vmacro05141 Vaccinium macrocarpon
vmacro11232 Vaccinium macrocarpon
vmacro11233 Vaccinium macrocarpon
VMungo0002G0001 Vigna mungo
VMungo0647G2573 Vigna mungo
VMungo1309G2115 Vigna mungo

User provided reference genes

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