Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p06850 Brassica napus
A03p06860 Brassica napus
A03p06870 Brassica napus
A10p23810 Brassica napus
A10p23830 Brassica napus
Aa31LG11G14570 Aethionema arabicum
Actinidia11365 Actinidia chinensis
AL6G25710 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.4FF1BV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7BF3PT Arachis hypogaea
AT5G14930 Arabidopsis thaliana
ATR1149G066 Amborella trichopoda
Atru.chr8.2419 Acer truncatum
BcaB01g05089 Brassica carinata
BcaB01g05090 Brassica carinata
BcaB01g05092 Brassica carinata
BcaB08g36935 Brassica carinata
BcaB08g36937 Brassica carinata
BcaC04g18997 Brassica carinata
BcaC04g18999 Brassica carinata
BolC3t13284H Brassica oleracea
BolC3t13285H Brassica oleracea
BolC9t59059H Brassica oleracea
BolC9t59060H Brassica oleracea
BraA03t10010Z Brassica rapa
BraA10t44446Z Brassica rapa
BraA10t44448Z Brassica rapa
C03p07850 Brassica napus
C03p07860 Brassica napus
C03p07870 Brassica napus
C09p62220 Brassica napus
C09p62240 Brassica napus
CAN.G1649.3 Capsicum annuum
CARHR198390 Cardamine hirsuta
CARHR198400 Cardamine hirsuta
CARHR198410 Cardamine hirsuta
Carub.0006s1308 Capsella rubella
Ca_04222_v3 Cicer arietinum L.
Ca_15057_v3 Cicer arietinum L.
Cc07_g02580 Coffea canephora
Cfa007467 Carpinus fangiana
Cfa009717 Carpinus fangiana
Ciclev10011372m.g Citrus clementina
CiPaw.03G034800 Carya illinoinensis
CiPaw.03G034900 Carya illinoinensis
ClCG10G014520 Citrullus lanatus
ClCG10G014530 Citrullus lanatus
COL.COLO4_06143 Corchorus olitorius
Cpa.g.sc14.87 Carica papaya
CsaV3_3G042050 Cucumis sativus L.
CSS0029236 Camellia sinensis var. sinensis
DCAR_006077 Daucus carota
DCAR_006078 Daucus carota
DCAR_013976 Daucus carota
DCAR_013977 Daucus carota
Dinv35026 Davidia involucrata
Duzib264G0890 Durio zibethinus
ECA232G0705 Erigeron canadensis
ECA232G0762 Erigeron canadensis
ECA232G1211 Erigeron canadensis
Eucgr.C00300 Eucalyptus grandis
Eucgr.C00504 Eucalyptus grandis
Eucgr.C00536 Eucalyptus grandis
Eucgr.I01837 Eucalyptus grandis
Eucgr.I01838 Eucalyptus grandis
Eucgr.I01839 Eucalyptus grandis
Eucgr.I01840 Eucalyptus grandis
Eucgr.I01841 Eucalyptus grandis
Eucgr.I01843 Eucalyptus grandis
Eucgr.I01845 Eucalyptus grandis
Eucgr.I01847 Eucalyptus grandis
Eucgr.I01864 Eucalyptus grandis
Eucgr.I01866 Eucalyptus grandis
Eucgr.I01868 Eucalyptus grandis
Eucgr.I01871 Eucalyptus grandis
Eucgr.I01873 Eucalyptus grandis
FAN02G3801 Fragaria x ananassa
FAN05G0442 Fragaria x ananassa
FAN14G0689 Fragaria x ananassa
FvH4_2g18461 Fragaria vesca
FvH4_6g50160 Fragaria vesca
FvH4_6g50162 Fragaria vesca
Glyma.13G069000 Glycine max
Glyma.13G069600 Glycine max
Glyma.13G069800 Glycine max
Glyma.19G013200 Glycine max
Glyma.19G013300 Glycine max
Gohir.A07G218000 Gossypium hirsutum
Gohir.D07G225100 Gossypium hirsutum
Gorai.001G259500 Gossypium raimondii
GSVIVG01032530001 Vitis vinifera
GSVIVG01032531001 Vitis vinifera
GSVIVG01032532001 Vitis vinifera
GSVIVG01032533001 Vitis vinifera
GSVIVG01032534001 Vitis vinifera
GSVIVG01032535001 Vitis vinifera
GSVIVG01032536001 Vitis vinifera
GSVIVG01035081001 Vitis vinifera
GSVIVG01035083001 Vitis vinifera
GSVIVG01035085001 Vitis vinifera
GSVIVG01035088001 Vitis vinifera
HanXRQChr03g0089911 Helianthus annuus
HanXRQChr03g0089921 Helianthus annuus
HanXRQChr09g0265851 Helianthus annuus
HanXRQChr09g0274851 Helianthus annuus
HanXRQChr15g0488391 Helianthus annuus
Haze_05423 Corylus avellana
Haze_14641 Corylus avellana
Haze_19126 Corylus avellana
Lalb_Chr21g0319301 Lupinus albus
Lj1g0017446 Lotus japonicus
Lj2g0002792 Lotus japonicus
Lj2g0010048 Lotus japonicus
Lj2g0012835 Lotus japonicus
Lj2g0024933 Lotus japonicus
Lju41A31T31 Lonicera japonica
Lju41A31T32 Lonicera japonica
Lju41C30G11 Lonicera japonica
Lju41C31G4 Lonicera japonica
Lju41C31G5 Lonicera japonica
Lsat_1_v5_gn_4_180921 Lactuca sativa
Lsat_1_v5_gn_4_180961 Lactuca sativa
Lsat_1_v5_gn_4_180981 Lactuca sativa
Lsat_1_v5_gn_4_181061 Lactuca sativa
Manes.17G118200 Manihot esculenta
MD01G1017800 Malus domestica
MD09G1038500 Malus domestica
MD09G1038700 Malus domestica
MD09G1039000 Malus domestica
MD09G1039700 Malus domestica
MD09G1039800 Malus domestica
MD17G1039600 Malus domestica
MD17G1039700 Malus domestica
MD17G1039800 Malus domestica
MD17G1039900 Malus domestica
MD17G1040000 Malus domestica
Medtr0286s0040 Medicago truncatula
Medtr0286s0050 Medicago truncatula
Medtr3g467350 Medicago truncatula
Medtr3g467360 Medicago truncatula
Medtr6g007975 Medicago truncatula
Medtr6g007980 Medicago truncatula
Medtr6g007985 Medicago truncatula
Medtr6g008015 Medicago truncatula
Medtr6g008055 Medicago truncatula
MELO3C009925.2 Cucumis melo
Nitab4.5_0001727g0040 Nicotiana tabacum
Nitab4.5_0005797g0040 Nicotiana tabacum
Nitab4.5_0011847g0010 Nicotiana tabacum
Nitab4.5_0023218g0010 Nicotiana tabacum
Nn3g16989 Nelumbo nucifera
Nn3g16990 Nelumbo nucifera
Oeu029382.1 Olea europaea
Peaxi162Scf00195g00127 Petunia axillaris
Peaxi162Scf00368g00121 Petunia axillaris
PGR142G0819 Punica granatum
PGR142G3586 Punica granatum
PGR142G3985 Punica granatum
PGSC0003DMG400006945 Solanum tuberosum
PGSC0003DMG400021206 Solanum tuberosum
PGSC0003DMG400039376 Solanum tuberosum
Phvul.004G020000 Phaseolus vulgaris
Potri.001G290600 Populus trichocarpa
Potri.001G291033 Populus trichocarpa
Potri.001G291166 Populus trichocarpa
Potri.009G086100 Populus trichocarpa
Potri.019G005256 Populus trichocarpa
Potri.019G007227 Populus trichocarpa
Prupe.2G019500 Prunus persica
Prupe.3G279000 Prunus persica
Prupe.3G279300 Prunus persica
Psat1g079200 Pisum sativum
Psat1g079240 Pisum sativum
Psat1g079960 Pisum sativum
QL02p077924 Quercus lobata
QL02p078026 Quercus lobata
QL02p078066 Quercus lobata
QL02p078107 Quercus lobata
QL02p078129 Quercus lobata
QL02p078133 Quercus lobata
QL03p072630 Quercus lobata
QL03p072643 Quercus lobata
QL03p072773 Quercus lobata
QL04p034944 Quercus lobata
QL04p034975 Quercus lobata
QL05p000021 Quercus lobata
QL93p0205_0187 Quercus lobata
QL93p0205_0194 Quercus lobata
QL93p0205_0202 Quercus lobata
RcHm_v2.0_Chr2g0170411 Rosa chinensis
RcHm_v2.0_Chr2g0170431 Rosa chinensis
RcHm_v2.0_Chr2g0170561 Rosa chinensis
RcHm_v2.0_Chr6g0283951 Rosa chinensis
RcHm_v2.0_Chr6g0283961 Rosa chinensis
RcHm_v2.0_Chr6g0283981 Rosa chinensis
RcHm_v2.0_Chr7g0219521 Rosa chinensis
RcHm_v2.0_Chr7g0219541 Rosa chinensis
Rhsim10G0027700 Rhododendron simsii
Rhsim10G0029000 Rhododendron simsii
Sed0024325 Sechium edule
SEGI_21148 Sequoiadendron giganteum
Solyc02g067660.4 Solanum lycopersicum
Solyc02g069400.3 Solanum lycopersicum
Sopen02g016770 Solanum pennellii
Sopen02g018550 Solanum pennellii
Sp6g29120 Schrenkiella parvula
Sp6g29130 Schrenkiella parvula
TAR629G1733 Trochodendron aralioides
TAR629G3034 Trochodendron aralioides
THA.LOC104821072 Tarenaya hassleriana
Thecc.04G003800 Theobroma cacao
Thhalv10013249m.g Eutrema salsugineum
Thhalv10013264m.g Eutrema salsugineum
Thhalv10024953m.g Eutrema salsugineum
TPR.G30976 Trifolium pratense
TPR.G31458 Trifolium pratense
TPR.G31470 Trifolium pratense
TPR.G33057 Trifolium pratense
TPR.G35059 Trifolium pratense
TPR.G35838 Trifolium pratense
TPR.G35844 Trifolium pratense
TPR.G40696 Trifolium pratense
TWI36G0225 Tripterygium wilfordii
vmacro05793 Vaccinium macrocarpon
VMungo0464G1312 Vigna mungo
VMungo0464G1558 Vigna mungo
VMungo0464G1973 Vigna mungo

User provided reference genes

Program Settings