Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07750 Brassica napus
A01p19420 Brassica napus
A03p59820 Brassica napus
A03p59850 Brassica napus
A08p19200 Brassica napus
A08p20240 Brassica napus
Aa31LG10G8600 Aethionema arabicum
Aa31LG2G20100 Aethionema arabicum
Aa31LG2G20110 Aethionema arabicum
Actinidia20951 Actinidia chinensis
Ah.09g229470 Amaranthus hybridus
AL7G21730 Arabidopsis lyrata
AL7G24570 Arabidopsis lyrata
Aqoxy7G02490 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0R23JB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.12D61J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3M16KW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4EC6E4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9RI9QX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CDA9C7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EV9B18 Arachis hypogaea
AT4G28040 Arabidopsis thaliana
AT4G30420 Arabidopsis thaliana
ATR0580G341 Amborella trichopoda
ATR0712G154 Amborella trichopoda
ATR0712G166 Amborella trichopoda
ATR1128G024 Amborella trichopoda
ATR1149G110 Amborella trichopoda
Atru.chr2.2444 Acer truncatum
Atru.chr7.464 Acer truncatum
Atru.chr7.473 Acer truncatum
AUR62028405 Chenopodium quinoa
AUR62028406 Chenopodium quinoa
AUR62039756 Chenopodium quinoa
AUR62039757 Chenopodium quinoa
BcaB03g12554 Brassica carinata
BcaB03g12648 Brassica carinata
BcaC01g01151 Brassica carinata
BcaC07g38313 Brassica carinata
BcaC09g50517 Brassica carinata
BcaC09g50523 Brassica carinata
BcaC09g51832 Brassica carinata
BcaC09g51833 Brassica carinata
BcaNung00546 Brassica carinata
BcaNung00547 Brassica carinata
BcaNung01602 Brassica carinata
BcaNung02990 Brassica carinata
BolC1t00845H Brassica oleracea
BolC1t02396H Brassica oleracea
BolC3t21179H Brassica oleracea
BolC3t21182H Brassica oleracea
BolC7t46248H Brassica oleracea
BolC8t48736H Brassica oleracea
BraA01t00718Z Brassica rapa
BraA01t01882Z Brassica rapa
BraA03t15036Z Brassica rapa
BraA03t15041Z Brassica rapa
BraA03t15042Z Brassica rapa
BraA08t33882Z Brassica rapa
BraA08t33983Z Brassica rapa
C01p08630 Brassica napus
C01p24470 Brassica napus
C03p88710 Brassica napus
C07p57860 Brassica napus
C07p57900 Brassica napus
C08p10630 Brassica napus
CAN.G1190.34 Capsicum annuum
CANSAT11G0239 Cannabis sativa
CANSAT11G0325 Cannabis sativa
CANSAT11G0972 Cannabis sativa
CANSAT11G2188 Cannabis sativa
CANSAT11G2451 Cannabis sativa
CARHR235740 Cardamine hirsuta
CARHR238320 Cardamine hirsuta
Carub.0007s1018 Capsella rubella
Carub.0007s1274 Capsella rubella
Carub.0007s1275 Capsella rubella
Ca_21169_v3 Cicer arietinum L.
Cc06_g14090 Coffea canephora
CDE05G2769 Ceratophyllum demersum
Cfa012915 Carpinus fangiana
Cfa012916 Carpinus fangiana
Ciclev10008665m.g Citrus clementina
Ciclev10010601m.g Citrus clementina
CiPaw.08G001400 Carya illinoinensis
ClCG06G012840 Citrullus lanatus
ClCG11G012620 Citrullus lanatus
COL.COLO4_05372 Corchorus olitorius
COL.COLO4_08662 Corchorus olitorius
COL.COLO4_33995 Corchorus olitorius
COL.COLO4_34189 Corchorus olitorius
Cpa.g.sc127.41 Carica papaya
CsaV3_1G029400 Cucumis sativus L.
CsaV3_2G007860 Cucumis sativus L.
CSS0002384 Camellia sinensis var. sinensis
CSS0002861 Camellia sinensis var. sinensis
CSS0003968 Camellia sinensis var. sinensis
CSS0013090 Camellia sinensis var. sinensis
CSS0034609 Camellia sinensis var. sinensis
CSS0035502 Camellia sinensis var. sinensis
CSS0036448 Camellia sinensis var. sinensis
CSS0040973 Camellia sinensis var. sinensis
DCAR_017939 Daucus carota
Dinv41310 Davidia involucrata
Duzib150G0651 Durio zibethinus
ECA234G1335 Erigeron canadensis
ECA234G1744 Erigeron canadensis
EL10Ac8g18873 Beta vulgaris
EL10Ac8g18874 Beta vulgaris
EL10Ac8g18875 Beta vulgaris
Eucgr.C00215 Eucalyptus grandis
Eucgr.C00217 Eucalyptus grandis
Glyma.03G117000 Glycine max
Glyma.13G091100 Glycine max
Glyma.17G069202 Glycine max
Gohir.A05G006900 Gossypium hirsutum
Gohir.D05G007800 Gossypium hirsutum
Gorai.009G007900 Gossypium raimondii
Gorai.012G096400 Gossypium raimondii
GSVIVG01023731001 Vitis vinifera
HanXRQChr10g0306501 Helianthus annuus
HanXRQChr10g0306511 Helianthus annuus
Haze_21271 Corylus avellana
Hma1.2p1_1495F.1_g286990 Hydrangea macrophylla
HPP92_021951 Vanilla planifolia
Hund08971 Selenicereus undatus
Hund08978 Selenicereus undatus
Lalb_Chr12g0198921 Lupinus albus
Lj4g0014384 Lotus japonicus
Lj4g0023895 Lotus japonicus
Lj9A727T22 Lonicera japonica
Lsat_1_v5_gn_5_87741 Lactuca sativa
Manes.14G163300 Manihot esculenta
Manes.14G163600 Manihot esculenta
MBI14_g20315_MAGBIO Magnolia biondii
MD13G1273600 Malus domestica
Medtr2g065550 Medicago truncatula
Medtr4g129650 Medicago truncatula
Medtr8g006010 Medicago truncatula
Medtr8g006050 Medicago truncatula
Medtr8g006090 Medicago truncatula
Medtr8g006120 Medicago truncatula
MELO3C004103.2 Cucumis melo
MELO3C010177.2 Cucumis melo
MELO3C010178.2 Cucumis melo
Migut.J01413 Erythranthe guttata
Migut.K00278 Erythranthe guttata
MSTRG.10719 Avicennia marina
MSTRG.10720 Avicennia marina
MSTRG.27600 Avicennia marina
Nitab4.5_0001427g0140 Nicotiana tabacum
Nitab4.5_0003289g0010 Nicotiana tabacum
Nn2g12554 Nelumbo nucifera
Nn8g40234 Nelumbo nucifera
Oeu052224.1 Olea europaea
Oeu052225.1 Olea europaea
Oeu054254.1 Olea europaea
Os09g0426000 Oryza sativa ssp. japonica
Os09g0426200 Oryza sativa ssp. japonica
Os09g0426500 Oryza sativa ssp. japonica
Peaxi162Scf00934g00151 Petunia axillaris
PGR042G2150 Punica granatum
PGR102G0079 Punica granatum
PGR142G2382 Punica granatum
PGSC0003DMG400011223 Solanum tuberosum
Phvul.003G151700 Phaseolus vulgaris
Potri.006G177600 Populus trichocarpa
Potri.006G177700 Populus trichocarpa
Potri.006G177800 Populus trichocarpa
Potri.018G099500 Populus trichocarpa
Potri.018G099601 Populus trichocarpa
Prupe.1G098100 Prunus persica
Psat0s1163g0040 Pisum sativum
Psat0s1163g0080 Pisum sativum
Psat4g226160 Pisum sativum
Psat4g226200 Pisum sativum
Psat4g226240 Pisum sativum
Psat4g226280 Pisum sativum
Psat4g227000 Pisum sativum
Psat4g227040 Pisum sativum
PSO017G0336 Papaver somniferum
PSO017G3831 Papaver somniferum
PSO170G1321 Papaver somniferum
PSO170G1867 Papaver somniferum
QL02p092993 Quercus lobata
QL02p095447 Quercus lobata
QL02p095476 Quercus lobata
Rhsim01G0012700 Rhododendron simsii
Rhsim01G0012800 Rhododendron simsii
Rhsim03G0261900 Rhododendron simsii
SalBow1G1424 Salvia bowleyana
SalBow1G4468 Salvia bowleyana
Sc18g0003290 Simmondsia chinensis
Sc18g0003300 Simmondsia chinensis
Sed0004981 Sechium edule
Sed0006641 Sechium edule
Sed0008435 Sechium edule
Sed0010095 Sechium edule
Sed0010181 Sechium edule
Sed0013548 Sechium edule
Sed0020069 Sechium edule
Sed0024063 Sechium edule
Sed0024522 Sechium edule
SEGI_02002 Sequoiadendron giganteum
SEGI_13268 Sequoiadendron giganteum
SEGI_14812 Sequoiadendron giganteum
SEGI_24047 Sequoiadendron giganteum
SEGI_30568 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06042 Striga asiatica
Solyc07g006290.3 Solanum lycopersicum
Sopen07g002380 Solanum pennellii
Sp7g25990 Schrenkiella parvula
Sp7g28300 Schrenkiella parvula
TAR383G0834 Trochodendron aralioides
TAR684G0001 Trochodendron aralioides
THA.LOC104803519 Tarenaya hassleriana
Thecc.09G159200 Theobroma cacao
Thecc.09G159500 Theobroma cacao
Thhalv10025504m.g Eutrema salsugineum
Thhalv10025553m.g Eutrema salsugineum
TPR.G24868 Trifolium pratense
TPR.G28926 Trifolium pratense
TPR.G28927 Trifolium pratense
TPR.G28935 Trifolium pratense
TPR.G28937 Trifolium pratense
TPR.G37543 Trifolium pratense
TWI32G0845 Tripterygium wilfordii
TWI63G0869 Tripterygium wilfordii
TWI63G1730 Tripterygium wilfordii
vmacro06039 Vaccinium macrocarpon
vmacro13060 Vaccinium macrocarpon
VMungo0331G0471 Vigna mungo
VMungo1215G0415 Vigna mungo
Zm00001eb313490 Zea mays
Zm00001eb313500 Zea mays

User provided reference genes

Program Settings