Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36040 Brassica napus
A05p39630 Brassica napus
A05p39640 Brassica napus
A10p31890 Brassica napus
Aa31LG1G21090 Aethionema arabicum
Aa31LG3G1820 Aethionema arabicum
Actinidia11266 Actinidia chinensis
Actinidia26479 Actinidia chinensis
Actinidia38862 Actinidia chinensis
Ah.12g059950 Amaranthus hybridus
AL3G20480 Arabidopsis lyrata
AL6G13890 Arabidopsis lyrata
Aqoxy1G00899 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3IZ0NN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5W9P8T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79GA3M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G95YVJ Arachis hypogaea
AT3G09320 Arabidopsis thaliana
AT5G04270 Arabidopsis thaliana
ATR0559G349 Amborella trichopoda
ATR0680G261 Amborella trichopoda
Atru.chr12.831 Acer truncatum
Atru.chr8.1999 Acer truncatum
AUR62025777 Chenopodium quinoa
AUR62042386 Chenopodium quinoa
BcaB04g18533 Brassica carinata
BcaC01g04228 Brassica carinata
BcaC05g29520 Brassica carinata
BcaC05g29661 Brassica carinata
BcaC06g32130 Brassica carinata
BcaC06g32131 Brassica carinata
BolC3t16637H Brassica oleracea
BolC5t34517H Brassica oleracea
BolC9t60000H Brassica oleracea
BraA03t12775Z Brassica rapa
BraA05t22746Z Brassica rapa
BraA10t45233Z Brassica rapa
C03p43680 Brassica napus
C05p58680 Brassica napus
C09p72600 Brassica napus
CAN.G324.12 Capsicum annuum
CAN.G694.32 Capsicum annuum
CAN.G92.12 Capsicum annuum
CANSAT11G2353 Cannabis sativa
CANSAT56G2456 Cannabis sativa
CARHR083680 Cardamine hirsuta
CARHR209010 Cardamine hirsuta
Carub.0003s0844 Capsella rubella
Carub.0006s0322 Capsella rubella
Ca_10548_v3 Cicer arietinum L.
Ca_19975_v3 Cicer arietinum L.
CBR_g22879 Chara braunii
CBR_g38491 Chara braunii
Cc01_g21910 Coffea canephora
Cc02_g11020 Coffea canephora
Cc03_g06760 Coffea canephora
Cc06_g02450 Coffea canephora
Cc09_g09450 Coffea canephora
CDE02G2015 Ceratophyllum demersum
CDE04G0600 Ceratophyllum demersum
CDE07G2078 Ceratophyllum demersum
Cfa001683 Carpinus fangiana
Cfa017353 Carpinus fangiana
Ciclev10012400m.g Citrus clementina
Ciclev10032359m.g Citrus clementina
CiPaw.01G269800 Carya illinoinensis
CiPaw.05G119500 Carya illinoinensis
ClCG08G007650 Citrullus lanatus
ClCG10G021250 Citrullus lanatus
COL.COLO4_14775 Corchorus olitorius
Cpa.g.sc169.16 Carica papaya
Cpa.g.sc53.115 Carica papaya
Cre06.g277000 Chlamydomonas reinhardtii
CsaV3_3G034790 Cucumis sativus L.
CsaV3_6G036620 Cucumis sativus L.
CSS0046701 Camellia sinensis var. sinensis
DCAR_006420 Daucus carota
DCAR_028754 Daucus carota
DCAR_028755 Daucus carota
Dinv31218 Davidia involucrata
Dinv37156 Davidia involucrata
Duzib093G1811 Durio zibethinus
Duzib106G1622 Durio zibethinus
Duzib114G0504 Durio zibethinus
Duzib128G0338 Durio zibethinus
Duzib128G1577 Durio zibethinus
ECA232G3929 Erigeron canadensis
ECA247G0894 Erigeron canadensis
EL10As1g23091 Beta vulgaris
EL10As1g23092 Beta vulgaris
Eucgr.A01284 Eucalyptus grandis
Eucgr.A01285 Eucalyptus grandis
Eucgr.G02859 Eucalyptus grandis
FAN01G0168 Fragaria x ananassa
FAN02G1239 Fragaria x ananassa
FAN03G0645 Fragaria x ananassa
FAN06G0091 Fragaria x ananassa
FAN06G1512 Fragaria x ananassa
FAN09G0642 Fragaria x ananassa
FAN10G2026 Fragaria x ananassa
FAN10G3564 Fragaria x ananassa
FAN14G5857 Fragaria x ananassa
FvH4_6g13410 Fragaria vesca
FvH4_7g18860 Fragaria vesca
Glyma.01G099100 Glycine max
Glyma.03G069700 Glycine max
Glyma.10G208700 Glycine max
Glyma.20G182000 Glycine max
Gohir.A01G221726 Gossypium hirsutum
Gohir.A10G204100 Gossypium hirsutum
Gohir.A11G327500 Gossypium hirsutum
Gohir.D01G211200 Gossypium hirsutum
Gohir.D10G212000 Gossypium hirsutum
Gohir.D11G346400 Gossypium hirsutum
Gorai.002G257000 Gossypium raimondii
Gorai.007G376700 Gossypium raimondii
Gorai.011G237900 Gossypium raimondii
GSVIVG01016232001 Vitis vinifera
GSVIVG01034143001 Vitis vinifera
HanXRQChr09g0246851 Helianthus annuus
HanXRQChr10g0293311 Helianthus annuus
Haze_16850 Corylus avellana
Hma1.2p1_0936F.1_g238900 Hydrangea macrophylla
HPP92_006628 Vanilla planifolia
HPP92_006645 Vanilla planifolia
Lalb_Chr02g0152131 Lupinus albus
Lalb_Chr07g0192961 Lupinus albus
Lalb_Chr13g0291211 Lupinus albus
Lalb_Chr21g0313731 Lupinus albus
Lj2A18T50 Lonicera japonica
Lj2A92G93 Lonicera japonica
Lj3A965T73 Lonicera japonica
Lj3g0002666 Lotus japonicus
Lj5g0003625 Lotus japonicus
Lsat_1_v5_gn_4_68941 Lactuca sativa
Lsat_1_v5_gn_5_95580 Lactuca sativa
Lsat_1_v5_gn_9_33481 Lactuca sativa
Lsat_1_v5_gn_9_68260 Lactuca sativa
Manes.08G080900 Manihot esculenta
Manes.10G049400 Manihot esculenta
Mapoly0009s0186 Marchantia polymorpha
Mapoly0036s0118 Marchantia polymorpha
MBI14_g04655_MAGBIO Magnolia biondii
MCO07G653 Micromonas commoda
MCO12G089 Micromonas commoda
MCO13G476 Micromonas commoda
MD01G1104200 Malus domestica
MD04G1131400 Malus domestica
MD07G1171000 Malus domestica
MD12G1144500 Malus domestica
Medtr1g094610 Medicago truncatula
Medtr4g021795 Medicago truncatula
MELO3C009248.2 Cucumis melo
MELO3C019817.2 Cucumis melo
Migut.F01721 Erythranthe guttata
Migut.J00314 Erythranthe guttata
MSTRG.8134 Avicennia marina
Nitab4.5_0000096g0010 Nicotiana tabacum
Nitab4.5_0000202g0030 Nicotiana tabacum
Nitab4.5_0000216g0370 Nicotiana tabacum
Nitab4.5_0007184g0010 Nicotiana tabacum
Nn2g11168 Nelumbo nucifera
Nn2g13403 Nelumbo nucifera
Nn2g13760 Nelumbo nucifera
Oeu000806.2 Olea europaea
Oeu006900.3 Olea europaea
Oeu007797.1 Olea europaea
Oeu010097.3 Olea europaea
Os01g0844400 Oryza sativa ssp. japonica
Os02g0819100 Oryza sativa ssp. japonica
Os05g0458000 Oryza sativa ssp. japonica
Peaxi162Scf00094g01120 Petunia axillaris
Peaxi162Scf00330g00719 Petunia axillaris
Peaxi162Scf00627g00018 Petunia axillaris
PGR142G0193 Punica granatum
PGSC0003DMG400011066 Solanum tuberosum
PGSC0003DMG400023477 Solanum tuberosum
PGSC0003DMG401019151 Solanum tuberosum
Phvul.007G097300 Phaseolus vulgaris
Phvul.010G015000 Phaseolus vulgaris
Potri.006G087400 Populus trichocarpa
Potri.010G226100 Populus trichocarpa
Potri.016G100200 Populus trichocarpa
Pp3c10_20450 Physcomitrium patens
Pp3c3_24390 Physcomitrium patens
Pp3c3_2860 Physcomitrium patens
Prupe.2G209800 Prunus persica
Prupe.6G257900 Prunus persica
Psat6g181880 Pisum sativum
PSO339G2145 Papaver somniferum
PSO339G3369 Papaver somniferum
PSO513G0140 Papaver somniferum
PSO801G0241 Papaver somniferum
QL07p048854 Quercus lobata
QL08p054868 Quercus lobata
RcHm_v2.0_Chr1g0362791 Rosa chinensis
RcHm_v2.0_Chr3g0466281 Rosa chinensis
Rhsim05G0194400 Rhododendron simsii
Rhsim09G0149500 Rhododendron simsii
RhsimUnG0186900 Rhododendron simsii
Sabra06G0066600 Salix brachista
Sabra10G0174300 Salix brachista
Sc01g0004450 Simmondsia chinensis
Sc06g0001680 Simmondsia chinensis
Sed0017599 Sechium edule
Sed0022810 Sechium edule
SEGI_07099 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33770 Striga asiatica
SGA_v2.0_scaffold2G01359 Striga asiatica
SHI12701 Sapria himalayana
SMO174G0057 Selaginella moellendorffii
SMO244G0089 Selaginella moellendorffii
SMO296G0011 Selaginella moellendorffii
Solyc05g055630.3 Solanum lycopersicum
Solyc10g084820.2 Solanum lycopersicum
Solyc10g086565.2 Solanum lycopersicum
Sopen05g034070 Solanum pennellii
Sopen10g034260 Solanum pennellii
Sopen10g035950 Solanum pennellii
Sp3g07710 Schrenkiella parvula
Sp6g38480 Schrenkiella parvula
TAR623G1777 Trochodendron aralioides
TAR633G1759 Trochodendron aralioides
THA.LOC104816423 Tarenaya hassleriana
Thecc.05G036800 Theobroma cacao
Thecc.10G080500 Theobroma cacao
Thecc.10G080800 Theobroma cacao
Thhalv10014375m.g Eutrema salsugineum
Thhalv10021264m.g Eutrema salsugineum
TPR.G1914 Trifolium pratense
TPR.G5595 Trifolium pratense
TWI38G2143 Tripterygium wilfordii
TWI77G0527 Tripterygium wilfordii
unitig_21.g21018 Utricularia gibba
unitig_744.g24653 Utricularia gibba
unitig_899.g15035 Utricularia gibba
vmacro04852 Vaccinium macrocarpon
vmacro20169 Vaccinium macrocarpon
VMungo0331G1489 Vigna mungo
VMungo0720G2487 Vigna mungo
VMungo0720G2721 Vigna mungo
Zm00001eb148220 Zea mays
Zm00001eb259030 Zea mays
Zm00001eb289590 Zea mays

User provided reference genes

Program Settings