Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40700 Brassica napus
A03p37830 Brassica napus
A05p36650 Brassica napus
A06p12500 Brassica napus
A07p44260 Brassica napus
A09p60870 Brassica napus
Aa31LG7G1050 Aethionema arabicum
Aa31LG8G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5098 Anthoceros agrestis
Actinidia35426 Actinidia chinensis
Ah.16g106430 Amaranthus hybridus
AL1G28670 Arabidopsis lyrata
AL1G64460 Arabidopsis lyrata
AL2G39610 Arabidopsis lyrata
AL3G24510 Arabidopsis lyrata
AL6G49200 Arabidopsis lyrata
Aqoxy1G01468 Aquilegia oxysepala
AT1G16510 Arabidopsis thaliana
AT1G56150 Arabidopsis thaliana
AT1G79130 Arabidopsis thaliana
AT3G12830 Arabidopsis thaliana
ATR0122G002 Amborella trichopoda
ATR0122G033 Amborella trichopoda
ATR0763G061 Amborella trichopoda
Atru.chr1.121 Acer truncatum
BcaB02g06636 Brassica carinata
BcaB02g08668 Brassica carinata
BcaB04g18732 Brassica carinata
BcaB04g21041 Brassica carinata
BcaB06g25507 Brassica carinata
BcaC01g04037 Brassica carinata
BcaC05g25559 Brassica carinata
BcaC05g29234 Brassica carinata
BcaC08g47476 Brassica carinata
BcaC09g48266 Brassica carinata
BcaNung04899 Brassica carinata
BcaNung04902 Brassica carinata
BolC1t05176H Brassica oleracea
BolC3t16866H Brassica oleracea
BolC5t30196H Brassica oleracea
BolC5t34176H Brassica oleracea
BolC6t40318H Brassica oleracea
BolC8t51987H Brassica oleracea
BraA01t04104Z Brassica rapa
BraA03t12938Z Brassica rapa
BraA05t22468Z Brassica rapa
BraA06t24413Z Brassica rapa
BraA07t31935Z Brassica rapa
BraA09t41460Z Brassica rapa
C01p52330 Brassica napus
C03p45890 Brassica napus
C05p14760 Brassica napus
C05p55080 Brassica napus
C06p53010 Brassica napus
C08p44460 Brassica napus
CAN.G125.2 Capsicum annuum
CAN.G1411.1 Capsicum annuum
CAN.G943.48 Capsicum annuum
CANSAT80G2085 Cannabis sativa
CARHR016980 Cardamine hirsuta
CARHR045910 Cardamine hirsuta
CARHR072790 Cardamine hirsuta
CARHR087360 Cardamine hirsuta
CARHR130630 Cardamine hirsuta
Carub.0001s1626 Capsella rubella
Carub.0001s4178 Capsella rubella
Carub.0002s2601 Capsella rubella
Carub.0003s1220 Capsella rubella
Ca_03620_v3 Cicer arietinum L.
Cc05_g16250 Coffea canephora
CDE01G0111 Ceratophyllum demersum
CDE12G0232 Ceratophyllum demersum
CiPaw.11G063200 Carya illinoinensis
ClCG02G018600 Citrullus lanatus
ClCG09G022640 Citrullus lanatus
COL.COLO4_07947 Corchorus olitorius
COL.COLO4_30907 Corchorus olitorius
Cpa.g.sc2619.1 Carica papaya
CsaV3_6G013600 Cucumis sativus L.
CsaV3_7G022810 Cucumis sativus L.
CSS0015721 Camellia sinensis var. sinensis
CSS0016597 Camellia sinensis var. sinensis
CSS0047497 Camellia sinensis var. sinensis
DCAR_009647 Daucus carota
DCAR_016832 Daucus carota
DCAR_019922 Daucus carota
Dinv19601 Davidia involucrata
Dinv42488 Davidia involucrata
Duzib100G0001 Durio zibethinus
Duzib160G0580 Durio zibethinus
Duzib187G0219 Durio zibethinus
Duzib192G0776 Durio zibethinus
Duzib213G0902 Durio zibethinus
Duzib213G1070 Durio zibethinus
Duzib235G1332 Durio zibethinus
ECA240G3429 Erigeron canadensis
EL10Ac2g03278 Beta vulgaris
Eucgr.F01470 Eucalyptus grandis
FAN11G3984 Fragaria x ananassa
FAN16G3155 Fragaria x ananassa
FAN21G3308 Fragaria x ananassa
FAN25G0196 Fragaria x ananassa
FAN25G2019 Fragaria x ananassa
FvH4_3g15390 Fragaria vesca
Glyma.08G168300 Glycine max
Glyma.15G258800 Glycine max
Gohir.A01G096800 Gossypium hirsutum
Gohir.A05G328500 Gossypium hirsutum
Gohir.A06G141500 Gossypium hirsutum
Gohir.A08G232500 Gossypium hirsutum
Gohir.A10G048500 Gossypium hirsutum
Gohir.A13G122200 Gossypium hirsutum
Gohir.D01G081100 Gossypium hirsutum
Gohir.D05G329500 Gossypium hirsutum
Gohir.D08G252700 Gossypium hirsutum
Gohir.D10G049300 Gossypium hirsutum
Gohir.D13G126000 Gossypium hirsutum
Gorai.002G106000 Gossypium raimondii
Gorai.004G269500 Gossypium raimondii
Gorai.009G352900 Gossypium raimondii
Gorai.011G052800 Gossypium raimondii
Gorai.013G141300 Gossypium raimondii
GSVIVG01036807001 Vitis vinifera
HanXRQChr03g0078271 Helianthus annuus
HanXRQChr05g0160571 Helianthus annuus
HanXRQChr11g0335701 Helianthus annuus
HanXRQChr13g0409361 Helianthus annuus
Hma1.2p1_0084F.1_g043050 Hydrangea macrophylla
Hma1.2p1_0092F.1_g046710 Hydrangea macrophylla
Hma1.2p1_0151F.1_g067430 Hydrangea macrophylla
Hma1.2p1_0253F.1_g102896 Hydrangea macrophylla
Hma1.2p1_0253F.1_g102910 Hydrangea macrophylla
Hma1.2p1_0753F.1_g212920 Hydrangea macrophylla
Hma1.2p1_0931F.1_g238200 Hydrangea macrophylla
Hma1.2p1_0970F.1_g242710 Hydrangea macrophylla
Hma1.2p1_3845F.1_g337690 Hydrangea macrophylla
HPP92_000946 Vanilla planifolia
HPP92_004184 Vanilla planifolia
HPP92_005930 Vanilla planifolia
HPP92_019557 Vanilla planifolia
Lalb_Chr01g0007121 Lupinus albus
Lalb_Chr03g0031661 Lupinus albus
Lalb_Chr19g0133351 Lupinus albus
Lalb_Chr20g0108621 Lupinus albus
Lalb_Chr25g0284801 Lupinus albus
Lj3g0005494 Lotus japonicus
Lj3g0021167 Lotus japonicus
Lj3g0023479 Lotus japonicus
Lsat_1_v5_gn_7_110241 Lactuca sativa
Lsat_1_v5_gn_7_70721 Lactuca sativa
Manes.06G174800 Manihot esculenta
Manes.14G011300 Manihot esculenta
MBI02_g30403_MAGBIO Magnolia biondii
MBI18_g01896_MAGBIO Magnolia biondii
MBI18_g01897_MAGBIO Magnolia biondii
MBI18_g01898_MAGBIO Magnolia biondii
MD01G1200100 Malus domestica
MD05G1223400 Malus domestica
MD10G1204800 Malus domestica
Medtr2g066830 Medicago truncatula
Medtr8g461210 Medicago truncatula
MELO3C000885.2 Cucumis melo
MELO3C019649.2 Cucumis melo
Migut.H01677 Erythranthe guttata
Migut.M01538 Erythranthe guttata
MSTRG.13074 Avicennia marina
MSTRG.14557 Avicennia marina
MSTRG.16102 Avicennia marina
MSTRG.16105 Avicennia marina
Nitab4.5_0000134g0010 Nicotiana tabacum
Nitab4.5_0000747g0050 Nicotiana tabacum
Nitab4.5_0001791g0040 Nicotiana tabacum
Nn7g37880 Nelumbo nucifera
Oeu001954.1 Olea europaea
Oeu034060.1 Olea europaea
Oeu047439.1 Olea europaea
Oeu051682.1 Olea europaea
Oeu051992.1 Olea europaea
Oeu051994.1 Olea europaea
Os03g0780350 Oryza sativa ssp. japonica
Os04g0617050 Oryza sativa ssp. japonica
Os06g0671150 Oryza sativa ssp. japonica
Os12g0626200 Oryza sativa ssp. japonica
Peaxi162Scf00006g00111 Petunia axillaris
Peaxi162Scf00452g00055 Petunia axillaris
PGR031G0660 Punica granatum
PGSC0003DMG400022233 Solanum tuberosum
Phvul.005G060300 Phaseolus vulgaris
Phvul.011G172600 Phaseolus vulgaris
Potri.005G096400 Populus trichocarpa
Potri.007G067800 Populus trichocarpa
Pp3c6_4580 Physcomitrium patens
Prupe.4G136800 Prunus persica
Psat1g006320 Pisum sativum
Psat4g179960 Pisum sativum
QL04p079789 Quercus lobata
RcHm_v2.0_Chr1g0324921 Rosa chinensis
RcHm_v2.0_Chr5g0025871 Rosa chinensis
Rhsim04G0005000 Rhododendron simsii
Rhsim06G0241300 Rhododendron simsii
Sabra01G0059500 Salix brachista
Sabra03G0107700 Salix brachista
Sabra05G0079200 Salix brachista
Sabra07G0053800 Salix brachista
Sabra07G0054200 Salix brachista
Sabra07G0054500 Salix brachista
Sabra07G0054800 Salix brachista
Sc06g0002760 Simmondsia chinensis
Sc09g0007660 Simmondsia chinensis
Sed0003268 Sechium edule
Sed0003993 Sechium edule
Sed0012958 Sechium edule
Sed0025360 Sechium edule
SEGI_40047 Sequoiadendron giganteum
SGA_v2.0_scaffold186G40205 Striga asiatica
SGA_v2.0_scaffold239G44039 Striga asiatica
SGA_v2.0_scaffold49G18184 Striga asiatica
SGA_v2.0_scaffold7G03602 Striga asiatica
SHI21410 Sapria himalayana
SMO118G0207 Selaginella moellendorffii
SMO118G0300 Selaginella moellendorffii
SMO367G1045 Selaginella moellendorffii
Solyc07g066560.1 Solanum lycopersicum
Sopen07g034720 Solanum pennellii
Sp1g14670 Schrenkiella parvula
Sp3g10990 Schrenkiella parvula
Sp5g34200 Schrenkiella parvula
TAR627G0878 Trochodendron aralioides
THA.LOC104810268 Tarenaya hassleriana
THA.LOC104812360 Tarenaya hassleriana
THA.LOC104826240 Tarenaya hassleriana
THA.LOC109116763 Tarenaya hassleriana
Thecc.06G134200 Theobroma cacao
Thecc.07G169500 Theobroma cacao
Thhalv10009033m.g Eutrema salsugineum
Thhalv10019859m.g Eutrema salsugineum
Thhalv10022038m.g Eutrema salsugineum
TPR.G16466 Trifolium pratense
TPR.G33822 Trifolium pratense
TWI38G0422 Tripterygium wilfordii
TWI38G1259 Tripterygium wilfordii
TWI39G0025 Tripterygium wilfordii
Zm00001eb032470 Zea mays
Zm00001eb052600 Zea mays
Zm00001eb207400 Zea mays
Zm00001eb213640 Zea mays
Zm00001eb274080 Zea mays
Zm00001eb284790 Zea mays
Zm00001eb353350 Zea mays
Zm00001eb353370 Zea mays
Zm00001eb353400 Zea mays
Zm00001eb353410 Zea mays
Zm00001eb390100 Zea mays
Zm00001eb390170 Zea mays
Zm00001eb407640 Zea mays
Zm00001eb431010 Zea mays

User provided reference genes

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