Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p36050 Brassica napus
A05p39670 Brassica napus
A10p16620 Brassica napus
A10p33480 Brassica napus
Aa31LG1G11790 Aethionema arabicum
Aa31LG1G22620 Aethionema arabicum
Aa31LG3G1790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.196 Anthoceros agrestis
Actinidia05317 Actinidia chinensis
Actinidia07025 Actinidia chinensis
Actinidia13149 Actinidia chinensis
Actinidia23931 Actinidia chinensis
Actinidia37194 Actinidia chinensis
Ah.15g097650 Amaranthus hybridus
AL3G20430 Arabidopsis lyrata
AL6G11320 Arabidopsis lyrata
AL8G35890 Arabidopsis lyrata
Aqoxy1G00921 Aquilegia oxysepala
Aqoxy2G02238 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.93WSV1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H02YA3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H2K856 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4J3HI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ITS9LF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KAWM4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WX6LME Arachis hypogaea
AT3G09300 Arabidopsis thaliana
AT5G02100 Arabidopsis thaliana
AT5G59420 Arabidopsis thaliana
ATR0559G242 Amborella trichopoda
ATR0763G023 Amborella trichopoda
Atru.chr3.3948 Acer truncatum
Atru.chr8.1986 Acer truncatum
AUR62001770 Chenopodium quinoa
AUR62009558 Chenopodium quinoa
AUR62017127 Chenopodium quinoa
AUR62035683 Chenopodium quinoa
BcaB08g36260 Brassica carinata
BcaC01g04227 Brassica carinata
BcaC04g19777 Brassica carinata
BcaC05g29523 Brassica carinata
BcaC05g29658 Brassica carinata
BcaC09g48017 Brassica carinata
BcaC09g48070 Brassica carinata
BcaC09g48071 Brassica carinata
BolC1t05461H Brassica oleracea
BolC3t16638H Brassica oleracea
BolC5t34520H Brassica oleracea
BolC8t50875H Brassica oleracea
BolC9t58043H Brassica oleracea
BolC9t60172H Brassica oleracea
BraA01t04304Z Brassica rapa
BraA03t12776Z Brassica rapa
BraA05t22749Z Brassica rapa
BraA10t43745Z Brassica rapa
BraA10t45378Z Brassica rapa
C03p43690 Brassica napus
C05p58710 Brassica napus
C08p32650 Brassica napus
C09p74380 Brassica napus
CAN.G324.10 Capsicum annuum
CANSAT35G1918 Cannabis sativa
CANSAT54G2131 Cannabis sativa
CARHR060400 Cardamine hirsuta
CARHR083660 Cardamine hirsuta
CARHR180840 Cardamine hirsuta
CARHR211260 Cardamine hirsuta
CARHR285790 Cardamine hirsuta
Carub.0003s0841 Capsella rubella
Carub.0006s0094 Capsella rubella
Carub.0008s2009 Capsella rubella
Ca_07555_v3 Cicer arietinum L.
Ca_19149_v3 Cicer arietinum L.
CBR_g8578 Chara braunii
Cc01_g13030 Coffea canephora
Cc06_g02540 Coffea canephora
CDE07G1471 Ceratophyllum demersum
Cfa011518 Carpinus fangiana
Cfa017365 Carpinus fangiana
Ciclev10011693m.g Citrus clementina
CiPaw.09G194000 Carya illinoinensis
CiPaw.10G146200 Carya illinoinensis
CiPaw.13G092500 Carya illinoinensis
CiPaw.14G067800 Carya illinoinensis
ClCG03G001400 Citrullus lanatus
COL.COLO4_14786 Corchorus olitorius
COL.COLO4_18529 Corchorus olitorius
Cpa.g.sc169.26 Carica papaya
Cpa.g.sc81.128 Carica papaya
Cre03.g199759 Chlamydomonas reinhardtii
Cre09.g392750 Chlamydomonas reinhardtii
Cre16.g670050 Chlamydomonas reinhardtii
CsaV3_1G034390 Cucumis sativus L.
CSS0038775 Camellia sinensis var. sinensis
CSS0041007 Camellia sinensis var. sinensis
CSS0049551 Camellia sinensis var. sinensis
DCAR_010402 Daucus carota
DCAR_015896 Daucus carota
Dinv04180 Davidia involucrata
Dinv35589 Davidia involucrata
Duzib093G1170 Durio zibethinus
Duzib128G1598 Durio zibethinus
Duzib168G0354 Durio zibethinus
ECA236G1393 Erigeron canadensis
ECA240G2865 Erigeron canadensis
EL10Ac7g16035 Beta vulgaris
EL10As1g23056 Beta vulgaris
Eucgr.A01280 Eucalyptus grandis
Eucgr.B02352 Eucalyptus grandis
FAN02G2637 Fragaria x ananassa
FAN05G1469 Fragaria x ananassa
FAN05G4079 Fragaria x ananassa
FAN09G3665 Fragaria x ananassa
FAN11G3755 Fragaria x ananassa
FAN14G4397 Fragaria x ananassa
FAN16G2429 Fragaria x ananassa
FAN21G1470 Fragaria x ananassa
FAN25G3214 Fragaria x ananassa
FvH4_3g36500 Fragaria vesca
FvH4_6g13550 Fragaria vesca
Glyma.07G132900 Glycine max
Glyma.11G138800 Glycine max
Glyma.12G062400 Glycine max
Glyma.15G037400 Glycine max
Glyma.18G182000 Glycine max
Gohir.A03G043300 Gossypium hirsutum
Gohir.A05G094700 Gossypium hirsutum
Gohir.A09G155200 Gossypium hirsutum
Gohir.D05G095040 Gossypium hirsutum
Gohir.D05G095160 Gossypium hirsutum
Gohir.D09G150800 Gossypium hirsutum
Gorai.006G172100 Gossypium raimondii
Gorai.009G098400 Gossypium raimondii
GSVIVG01024937001 Vitis vinifera
GSVIVG01034158001 Vitis vinifera
HanXRQChr03g0093041 Helianthus annuus
HanXRQChr04g0106011 Helianthus annuus
HanXRQChr13g0423231 Helianthus annuus
Haze_20806 Corylus avellana
Haze_24116 Corylus avellana
Haze_26939 Corylus avellana
Hma1.2p1_0936F.1_g238790 Hydrangea macrophylla
HPP92_019245 Vanilla planifolia
HPP92_019835 Vanilla planifolia
Hund18898 Selenicereus undatus
Lalb_Chr01g0003621 Lupinus albus
Lalb_Chr03g0026561 Lupinus albus
Lalb_Chr03g0042301 Lupinus albus
Lalb_Chr24g0394081 Lupinus albus
Lj1g0020666 Lotus japonicus
Lj2A93T88 Lonicera japonica
Lj2C1065G2 Lonicera japonica
Lj3g0015825 Lotus japonicus
Lsat_1_v5_gn_3_126481 Lactuca sativa
Lsat_1_v5_gn_3_21020 Lactuca sativa
Lsat_1_v5_gn_4_171980 Lactuca sativa
Lsat_1_v5_gn_7_12200 Lactuca sativa
Manes.01G172200 Manihot esculenta
Manes.01G172300 Manihot esculenta
Manes.02G131300 Manihot esculenta
Mapoly0020s0142 Marchantia polymorpha
MBI05_g28382_MAGBIO Magnolia biondii
MBI14_g12117_MAGBIO Magnolia biondii
MD03G1090000 Malus domestica
MD04G1130200 Malus domestica
MD11G1099300 Malus domestica
MD12G1143300 Malus domestica
Medtr4g064110 Medicago truncatula
Medtr7g061830 Medicago truncatula
MELO3C020621.2 Cucumis melo
Migut.D02081 Erythranthe guttata
Migut.L01951 Erythranthe guttata
MSTRG.18569 Avicennia marina
MSTRG.21209 Avicennia marina
Nitab4.5_0000202g0070 Nicotiana tabacum
Nitab4.5_0000216g0340 Nicotiana tabacum
Nitab4.5_0003943g0020 Nicotiana tabacum
Nn2g11141 Nelumbo nucifera
Nn2g13375 Nelumbo nucifera
Oeu004159.1 Olea europaea
Oeu046391.1 Olea europaea
Os03g0274000 Oryza sativa ssp. japonica
Peaxi162Scf00094g00116 Petunia axillaris
PGR102G0552 Punica granatum
PGSC0003DMG401011006 Solanum tuberosum
Phvul.008G098600 Phaseolus vulgaris
Phvul.011G063500 Phaseolus vulgaris
Phvul.L006343 Phaseolus vulgaris
Potri.006G086400 Populus trichocarpa
Pp3c17_770 Physcomitrium patens
Pp3c19_15950 Physcomitrium patens
PRCOL_00003231 Prasinoderma coloniale
PRCOL_00005803 Prasinoderma coloniale
Prupe.6G074200 Prunus persica
Prupe.6G256800 Prunus persica
Psat3g138840 Pisum sativum
Psat7g215040 Pisum sativum
PSO063G2251 Papaver somniferum
PSO063G2942 Papaver somniferum
PSO135G0901 Papaver somniferum
PSO151G0032 Papaver somniferum
PSO151G0040 Papaver somniferum
PSO151G0207 Papaver somniferum
PSO339G1970 Papaver somniferum
PSO339G3861 Papaver somniferum
PSO339G5260 Papaver somniferum
PSO339G5664 Papaver somniferum
PSO384G4972 Papaver somniferum
QL01p031460 Quercus lobata
QL07p048615 Quercus lobata
RcHm_v2.0_Chr3g0466411 Rosa chinensis
RcHm_v2.0_Chr5g0065361 Rosa chinensis
RcHm_v2.0_Chr5g0065411 Rosa chinensis
Rhsim04G0157800 Rhododendron simsii
Rhsim05G0193800 Rhododendron simsii
Rhsim13G0081400 Rhododendron simsii
Sabra06G0066000 Salix brachista
SalBow3G1359 Salvia bowleyana
SalBow4G1510 Salvia bowleyana
SalBow4G3142 Salvia bowleyana
Sc12g0001440 Simmondsia chinensis
Sc20g0004990 Simmondsia chinensis
Sed0011978 Sechium edule
Sed0012436 Sechium edule
SEGI_05108 Sequoiadendron giganteum
SEGI_18806 Sequoiadendron giganteum
SEGI_20361 Sequoiadendron giganteum
SGA_v2.0_scaffold35G14240 Striga asiatica
SHI38290 Sapria himalayana
SMO203G0221 Selaginella moellendorffii
Solyc10g084800.2 Solanum lycopersicum
Sopen10g034240 Solanum pennellii
Sp3g07680 Schrenkiella parvula
Sp6g21100 Schrenkiella parvula
TAR623G1077 Trochodendron aralioides
TAR636G0315 Trochodendron aralioides
THA.LOC104799441 Tarenaya hassleriana
THA.LOC104810773 Tarenaya hassleriana
THA.LOC104816253 Tarenaya hassleriana
THA.LOC104823264 Tarenaya hassleriana
Thecc.05G038200 Theobroma cacao
Thecc.09G319800 Theobroma cacao
Thhalv10013498m.g Eutrema salsugineum
Thhalv10020702m.g Eutrema salsugineum
TPR.G1705 Trifolium pratense
TPR.G23628 Trifolium pratense
TWI53G1163 Tripterygium wilfordii
TWI74G0783 Tripterygium wilfordii
TWI77G0529 Tripterygium wilfordii
vmacro03060 Vaccinium macrocarpon
vmacro08648 Vaccinium macrocarpon
vmacro20164 Vaccinium macrocarpon
VMungo1080G1107 Vigna mungo
VMungo1127G2242 Vigna mungo
VMungo1383G0984 Vigna mungo
Zm00001eb012300 Zea mays
Zm00001eb397710 Zea mays

User provided reference genes

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