Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00670 Brassica napus
A04p02890 Brassica napus
A07p23700 Brassica napus
A09p50730 Brassica napus
Aa31LG10G12580 Aethionema arabicum
Aa31LG3G14070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.952 Anthoceros agrestis
Actinidia03800 Actinidia chinensis
Actinidia12030 Actinidia chinensis
Ah.02g126030 Amaranthus hybridus
AL5G39530 Arabidopsis lyrata
Aqoxy2G02284 Aquilegia oxysepala
Aqoxy5G01180 Aquilegia oxysepala
Aqoxy6G01238 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.35HI1V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N5PDN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PE1P3P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4SW2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XA391K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z230EC Arachis hypogaea
AT3G57870 Arabidopsis thaliana
ATR0724G097 Amborella trichopoda
Atru.chr13.738 Acer truncatum
Atru.chr3.278 Acer truncatum
AUR62003918 Chenopodium quinoa
AUR62038231 Chenopodium quinoa
BcaB02g07571 Brassica carinata
BcaB02g08117 Brassica carinata
BcaB02g08292 Brassica carinata
BcaC02g09965 Brassica carinata
BcaC02g10290 Brassica carinata
BcaC07g40161 Brassica carinata
BcaC07g40333 Brassica carinata
BcaC08g44873 Brassica carinata
BcaC09g49682 Brassica carinata
BolC1t03368H Brassica oleracea
BolC4t24594H Brassica oleracea
BolC4t25013H Brassica oleracea
BolC6t37643H Brassica oleracea
BolC8t50942H Brassica oleracea
BraA04t15786Z Brassica rapa
BraA04t16012Z Brassica rapa
BraA07t30022Z Brassica rapa
BraA09t40520Z Brassica rapa
C01p33990 Brassica napus
C04p30750 Brassica napus
C04p34530 Brassica napus
C05p36810 Brassica napus
C06p24910 Brassica napus
C08p33440 Brassica napus
CAN.G1030.32 Capsicum annuum
CAN.G1166.16 Capsicum annuum
CAN.G1194.17 Capsicum annuum
CAN.G370.33 Capsicum annuum
CAN.G484.74 Capsicum annuum
CAN.G82.16 Capsicum annuum
CANSAT25G0775 Cannabis sativa
CANSAT25G3423 Cannabis sativa
CARHR168180 Cardamine hirsuta
Carub.0005s2472 Capsella rubella
Ca_22147_v3 Cicer arietinum L.
Ca_24747_v3 Cicer arietinum L.
Ca_29666_v3 Cicer arietinum L.
CBR_g18677 Chara braunii
CBR_g4821 Chara braunii
Cc07_g06240 Coffea canephora
Cc10_g04760 Coffea canephora
CDE01G0105 Ceratophyllum demersum
CDE02G0799 Ceratophyllum demersum
CDE02G2321 Ceratophyllum demersum
CDE04G0902 Ceratophyllum demersum
CDE07G0404 Ceratophyllum demersum
Cfa004046 Carpinus fangiana
Cfa022445 Carpinus fangiana
Ciclev10002741m.g Citrus clementina
Ciclev10026671m.g Citrus clementina
CiPaw.01G015000 Carya illinoinensis
CiPaw.02G006700 Carya illinoinensis
ClCG02G008000 Citrullus lanatus
COL.COLO4_10131 Corchorus olitorius
COL.COLO4_11455 Corchorus olitorius
Cpa.g.sc21.165 Carica papaya
Cpa.g.sc85.103 Carica papaya
Cre01.g019450 Chlamydomonas reinhardtii
Cre02.g142000 Chlamydomonas reinhardtii
Cre03.g167000 Chlamydomonas reinhardtii
CsaV3_2G035660 Cucumis sativus L.
DCAR_025749 Daucus carota
Dinv26848 Davidia involucrata
Dinv30017 Davidia involucrata
Dinv35932 Davidia involucrata
Dinv39281 Davidia involucrata
Duzib147G1639 Durio zibethinus
Duzib187G0862 Durio zibethinus
Duzib264G0426 Durio zibethinus
ECA232G4140 Erigeron canadensis
ECA232G4200 Erigeron canadensis
ECA238G2573 Erigeron canadensis
EL10Ac6g15708 Beta vulgaris
Eucgr.F00190 Eucalyptus grandis
Eucgr.H02096 Eucalyptus grandis
FAN20G1473 Fragaria x ananassa
FAN23G1733 Fragaria x ananassa
FAN26G2448 Fragaria x ananassa
FAN28G1058 Fragaria x ananassa
FvH4_1g16390 Fragaria vesca
FvH4_2g33980 Fragaria vesca
Glyma.01G188900 Glycine max
Glyma.05G091100 Glycine max
Glyma.11G053300 Glycine max
Glyma.17G169700 Glycine max
Gohir.A05G204700 Gossypium hirsutum
Gohir.A08G150600 Gossypium hirsutum
Gohir.A11G195700 Gossypium hirsutum
Gohir.A12G073200 Gossypium hirsutum
Gohir.D05G207900 Gossypium hirsutum
Gohir.D08G171650 Gossypium hirsutum
Gohir.D08G171700 Gossypium hirsutum
Gohir.D10G052500 Gossypium hirsutum
Gohir.D11G201700 Gossypium hirsutum
Gohir.D12G071001 Gossypium hirsutum
Gorai.004G179000 Gossypium raimondii
Gorai.004G179100 Gossypium raimondii
Gorai.007G216300 Gossypium raimondii
Gorai.008G078000 Gossypium raimondii
Gorai.009G214500 Gossypium raimondii
Gorai.011G056100 Gossypium raimondii
GSVIVG01009448001 Vitis vinifera
GSVIVG01022074001 Vitis vinifera
HanXRQChr02g0058631 Helianthus annuus
HanXRQChr09g0263251 Helianthus annuus
HanXRQChr12g0381831 Helianthus annuus
HanXRQChr13g0409091 Helianthus annuus
HanXRQChr15g0473631 Helianthus annuus
HanXRQChr16g0529791 Helianthus annuus
Haze_15366 Corylus avellana
Haze_18054 Corylus avellana
Haze_18056 Corylus avellana
Haze_19132 Corylus avellana
Haze_27129 Corylus avellana
Hma1.2p1_0017F.1_g011750 Hydrangea macrophylla
Hma1.2p1_0634F.1_g193095 Hydrangea macrophylla
HPP92_005018 Vanilla planifolia
Hund16226 Selenicereus undatus
Hund16358 Selenicereus undatus
Lalb_Chr05g0226191 Lupinus albus
Lalb_Chr05g0226341 Lupinus albus
Lalb_Chr14g0368531 Lupinus albus
Lalb_Chr16g0378651 Lupinus albus
Lalb_Chr16g0388761 Lupinus albus
Lalb_Chr22g0354991 Lupinus albus
Lj2g0009954 Lotus japonicus
Lj4C154G7 Lonicera japonica
Lj4C62G14 Lonicera japonica
Lj4g0026333 Lotus japonicus
Lj7C74T9 Lonicera japonica
Lsat_1_v5_gn_3_90141 Lactuca sativa
Lsat_1_v5_gn_4_164560 Lactuca sativa
Manes.12G106700 Manihot esculenta
Manes.13G120200 Manihot esculenta
Mapoly0163s0010 Marchantia polymorpha
MBI16_g00503_MAGBIO Magnolia biondii
MCO05G062 Micromonas commoda
MCO09G180 Micromonas commoda
MCO10G347 Micromonas commoda
MD02G1176400 Malus domestica
MD08G1095700 Malus domestica
MD15G1078500 Malus domestica
MD15G1286800 Malus domestica
Medtr4g094872 Medicago truncatula
Medtr5g016630 Medicago truncatula
MELO3C024782.2 Cucumis melo
Migut.C00541 Erythranthe guttata
Migut.C00542 Erythranthe guttata
Migut.H00410 Erythranthe guttata
MSTRG.15377 Avicennia marina
MSTRG.23727 Avicennia marina
MSTRG.3437 Avicennia marina
Nitab4.5_0000287g0010 Nicotiana tabacum
Nitab4.5_0000929g0080 Nicotiana tabacum
Nitab4.5_0001207g0100 Nicotiana tabacum
Nitab4.5_0001603g0040 Nicotiana tabacum
Nitab4.5_0003229g0100 Nicotiana tabacum
Nitab4.5_0003962g0020 Nicotiana tabacum
Nitab4.5_0005129g0010 Nicotiana tabacum
Nitab4.5_0007370g0020 Nicotiana tabacum
Nitab4.5_0008728g0020 Nicotiana tabacum
Nn1g04763 Nelumbo nucifera
Nn5g30371 Nelumbo nucifera
Oeu009827.1 Olea europaea
Oeu014812.1 Olea europaea
Oeu049894.1 Olea europaea
Os03g0123100 Oryza sativa ssp. japonica
Os04g0580400 Oryza sativa ssp. japonica
Os10g0536000 Oryza sativa ssp. japonica
Peaxi162Scf00160g00030 Petunia axillaris
Peaxi162Scf00365g00410 Petunia axillaris
Peaxi162Scf00403g00031 Petunia axillaris
Peaxi162Scf00549g00223 Petunia axillaris
Peaxi162Scf00882g00001 Petunia axillaris
Peaxi162Scf00882g00012 Petunia axillaris
PGR004G0141 Punica granatum
PGR083G0865 Punica granatum
PGSC0003DMG400006481 Solanum tuberosum
PGSC0003DMG400007950 Solanum tuberosum
PGSC0003DMG400009844 Solanum tuberosum
PGSC0003DMG400015405 Solanum tuberosum
PGSC0003DMG400018161 Solanum tuberosum
PGSC0003DMG400039325 Solanum tuberosum
Phvul.002G016300 Phaseolus vulgaris
Phvul.003G241600 Phaseolus vulgaris
Potri.002G123600 Populus trichocarpa
Potri.005G141100 Populus trichocarpa
Potri.014G024801 Populus trichocarpa
Potri.014G024950 Populus trichocarpa
Pp3c24_19480 Physcomitrium patens
Pp3c8_18320 Physcomitrium patens
PRCOL_00000706 Prasinoderma coloniale
Prupe.1G431700 Prunus persica
Prupe.6G231300 Prunus persica
Psat0ss5882g0040 Pisum sativum
Psat4g085520 Pisum sativum
PSO170G4150 Papaver somniferum
PSO210G3164 Papaver somniferum
PSO541G5248 Papaver somniferum
PSO675G2903 Papaver somniferum
QL02p004178 Quercus lobata
QL06p040516 Quercus lobata
RcHm_v2.0_Chr2g0106261 Rosa chinensis
RcHm_v2.0_Chr6g0308431 Rosa chinensis
Rhsim08G0098800 Rhododendron simsii
Rhsim10G0113700 Rhododendron simsii
Sabra02G0097100 Salix brachista
Sabra05G0110300 Salix brachista
Sabra14G0016900 Salix brachista
SalBow5G5683 Salvia bowleyana
Sc02g0007410 Simmondsia chinensis
Sc16g0004530 Simmondsia chinensis
Sed0015990 Sechium edule
Sed0026504 Sechium edule
SGA_v2.0_scaffold143G35796 Striga asiatica
SGA_v2.0_scaffold15G07345 Striga asiatica
SMO197G0054 Selaginella moellendorffii
Solyc02g093110.3 Solanum lycopersicum
Solyc03g044260.3 Solanum lycopersicum
Solyc03g112720.4 Solanum lycopersicum
Solyc04g078620.3 Solanum lycopersicum
Solyc07g021660.2 Solanum lycopersicum
Solyc12g088680.2 Solanum lycopersicum
Sopen02g037680 Solanum pennellii
Sopen03g008310 Solanum pennellii
Sopen03g031800 Solanum pennellii
Sopen04g032200 Solanum pennellii
Sopen07g011510 Solanum pennellii
Sopen12g030580 Solanum pennellii
Sp5g01130 Schrenkiella parvula
Sp5g04850 Schrenkiella parvula
TAR376G1042 Trochodendron aralioides
TAR625G0778 Trochodendron aralioides
TAR628G0039 Trochodendron aralioides
TAR628G1103 Trochodendron aralioides
THA.LOC104801429 Tarenaya hassleriana
THA.LOC104802422 Tarenaya hassleriana
THA.LOC104819590 Tarenaya hassleriana
Thecc.01G061000 Theobroma cacao
Thecc.08G002600 Theobroma cacao
Thhalv10006281m.g Eutrema salsugineum
Thhalv10006282m.g Eutrema salsugineum
TPR.G14587 Trifolium pratense
TPR.G26895 Trifolium pratense
TWI09G0480 Tripterygium wilfordii
TWI53G0075 Tripterygium wilfordii
TWI56G1239 Tripterygium wilfordii
TWI73G0503 Tripterygium wilfordii
vmacro05314 Vaccinium macrocarpon
vmacro17964 Vaccinium macrocarpon
VMungo0251G1388 Vigna mungo
VMungo1215G2395 Vigna mungo
Zm00001eb001680 Zea mays
Zm00001eb022000 Zea mays
Zm00001eb073110 Zea mays
Zm00001eb073120 Zea mays
Zm00001eb393660 Zea mays
Zm00001eb403740 Zea mays

User provided reference genes

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