Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p10960 Brassica napus
A03p15070 Brassica napus
A04p34570 Brassica napus
A05p01100 Brassica napus
A09p00940 Brassica napus
A09p53970 Brassica napus
A10p11040 Brassica napus
Aa31LG1G28080 Aethionema arabicum
Aa31LG3G9770 Aethionema arabicum
Aa31LG5G1060 Aethionema arabicum
Actinidia20270 Actinidia chinensis
AL4G46160 Arabidopsis lyrata
AL5G44500 Arabidopsis lyrata
AL6G52560 Arabidopsis lyrata
AL8G28330 Arabidopsis lyrata
Aqoxy7G00017 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8V59CD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQ85TZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DL5MW3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RK5691 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U66G4I Arachis hypogaea
AT2G46690 Arabidopsis thaliana
AT3G61900 Arabidopsis thaliana
AT4G00880 Arabidopsis thaliana
AT5G53590 Arabidopsis thaliana
ATR0620G124 Amborella trichopoda
ATR0684G226 Amborella trichopoda
Atru.chr12.2361 Acer truncatum
Atru.chr5.742 Acer truncatum
AUR62006024 Chenopodium quinoa
BcaB01g02300 Brassica carinata
BcaB01g04245 Brassica carinata
BcaB05g22059 Brassica carinata
BcaB06g29481 Brassica carinata
BcaB08g35727 Brassica carinata
BcaC01g06261 Brassica carinata
BcaC02g07012 Brassica carinata
BcaC02g12650 Brassica carinata
BcaC02g12654 Brassica carinata
BcaC03g14402 Brassica carinata
BcaC04g20430 Brassica carinata
BcaC04g20431 Brassica carinata
BcaC04g20432 Brassica carinata
BcaC04g24103 Brassica carinata
BcaC04g24114 Brassica carinata
BcaC07g40683 Brassica carinata
BcaC07g42590 Brassica carinata
BolC2t07946H Brassica oleracea
BolC3t14171H Brassica oleracea
BolC4t21779H Brassica oleracea
BolC4t28722H Brassica oleracea
BolC8t51262H Brassica oleracea
BolC9t53036H Brassica oleracea
BolC9t57234H Brassica oleracea
BraA02t06161Z Brassica rapa
BraA03t10801Z Brassica rapa
BraA04t18915Z Brassica rapa
BraA05t19110Z Brassica rapa
BraA09t35765Z Brassica rapa
BraA09t40811Z Brassica rapa
BraA10t43196Z Brassica rapa
C02p18160 Brassica napus
C03p17580 Brassica napus
C04p01240 Brassica napus
C04p72360 Brassica napus
C08p36830 Brassica napus
C09p01030 Brassica napus
C09p43480 Brassica napus
CAN.G1045.45 Capsicum annuum
CAN.G1527.12 Capsicum annuum
CAN.G1527.13 Capsicum annuum
CAN.G1527.14 Capsicum annuum
CAN.G540.1 Capsicum annuum
CAN.G540.3 Capsicum annuum
CANSAT21G1286 Cannabis sativa
CANSAT56G2186 Cannabis sativa
CANSAT56G3573 Cannabis sativa
CANSAT56G4425 Cannabis sativa
CARHR142040 Cardamine hirsuta
CARHR172260 Cardamine hirsuta
CARHR249450 Cardamine hirsuta
CARHR266720 Cardamine hirsuta
Carub.0004s2940 Capsella rubella
Carub.0005s2866 Capsella rubella
Carub.0006s3591 Capsella rubella
Carub.0008s1377 Capsella rubella
Ca_09533_v3 Cicer arietinum L.
Ca_16754_v3 Cicer arietinum L.
CDE04G0679 Ceratophyllum demersum
CDE04G1564 Ceratophyllum demersum
CDE11G0979 Ceratophyllum demersum
CDE12G0212 Ceratophyllum demersum
Cfa002619 Carpinus fangiana
Cfa003756 Carpinus fangiana
Cfa016177 Carpinus fangiana
Ciclev10022912m.g Citrus clementina
Ciclev10022948m.g Citrus clementina
CiPaw.01G080200 Carya illinoinensis
CiPaw.02G043800 Carya illinoinensis
CiPaw.02G043900 Carya illinoinensis
CiPaw.05G202700 Carya illinoinensis
CiPaw.06G042400 Carya illinoinensis
COL.COLO4_06267 Corchorus olitorius
COL.COLO4_14348 Corchorus olitorius
Cpa.g.sc144.6 Carica papaya
Cpa.g.sc3.142 Carica papaya
CsaV3_3G007730 Cucumis sativus L.
CsaV3_5G000180 Cucumis sativus L.
CsaV3_6G008790 Cucumis sativus L.
CSS0024285 Camellia sinensis var. sinensis
CSS0030334 Camellia sinensis var. sinensis
CSS0030699 Camellia sinensis var. sinensis
CSS0047292 Camellia sinensis var. sinensis
DCAR_002985 Daucus carota
DCAR_008966 Daucus carota
DCAR_014557 Daucus carota
DCAR_020356 Daucus carota
Dinv32630 Davidia involucrata
Duzib068G1326 Durio zibethinus
Duzib084G0384 Durio zibethinus
Duzib133G0081 Durio zibethinus
Duzib138G0088 Durio zibethinus
Duzib268G0756 Durio zibethinus
ECA232G5006 Erigeron canadensis
EL10Ac3g05203 Beta vulgaris
Eucgr.A01420 Eucalyptus grandis
FAN01G0855 Fragaria x ananassa
FAN01G2497 Fragaria x ananassa
FAN03G0042 Fragaria x ananassa
FAN03G0163 Fragaria x ananassa
FAN06G4859 Fragaria x ananassa
FAN06G5004 Fragaria x ananassa
FAN10G1097 Fragaria x ananassa
FAN10G2174 Fragaria x ananassa
FAN10G3862 Fragaria x ananassa
FvH4_7g17340 Fragaria vesca
FvH4_7g32600 Fragaria vesca
Glyma.03G259700 Glycine max
Glyma.04G231100 Glycine max
Glyma.06G134000 Glycine max
Glyma.07G051700 Glycine max
Glyma.07G051800 Glycine max
Glyma.16G020700 Glycine max
Glyma.16G020800 Glycine max
Glyma.19G258800 Glycine max
Gohir.A08G034800 Gossypium hirsutum
Gohir.A08G103100 Gossypium hirsutum
Gohir.A08G123500 Gossypium hirsutum
Gohir.A12G114900 Gossypium hirsutum
Gohir.A12G247100 Gossypium hirsutum
Gohir.D08G045300 Gossypium hirsutum
Gohir.D08G114900 Gossypium hirsutum
Gohir.D08G144900 Gossypium hirsutum
Gohir.D12G118300 Gossypium hirsutum
Gohir.D12G247800 Gossypium hirsutum
Gorai.004G044200 Gossypium raimondii
Gorai.004G123800 Gossypium raimondii
Gorai.004G149700 Gossypium raimondii
Gorai.008G128100 Gossypium raimondii
Gorai.008G265900 Gossypium raimondii
GSVIVG01038622001 Vitis vinifera
HanXRQChr02g0048401 Helianthus annuus
HanXRQChr02g0048411 Helianthus annuus
HanXRQChr04g0104991 Helianthus annuus
HanXRQChr04g0105001 Helianthus annuus
HanXRQChr05g0139281 Helianthus annuus
HanXRQChr07g0206361 Helianthus annuus
HanXRQChr15g0485531 Helianthus annuus
HanXRQChr17g0563421 Helianthus annuus
Haze_00275 Corylus avellana
Haze_15709 Corylus avellana
Hma1.2p1_0094F.1_g047210 Hydrangea macrophylla
HPP92_007407 Vanilla planifolia
HPP92_014390 Vanilla planifolia
HPP92_025414 Vanilla planifolia
Lalb_Chr04g0254251 Lupinus albus
Lalb_Chr04g0261371 Lupinus albus
Lalb_Chr08g0239821 Lupinus albus
Lalb_Chr10g0100801 Lupinus albus
Lalb_Chr11g0067251 Lupinus albus
Lalb_Chr15g0076441 Lupinus albus
Lalb_Chr18g0044621 Lupinus albus
Lalb_Chr23g0271831 Lupinus albus
Lj1g0016066 Lotus japonicus
Lj1g0022724 Lotus japonicus
Lj1g0022813 Lotus japonicus
Lj3g0002008 Lotus japonicus
Lj3g0004368 Lotus japonicus
Lj3g0019139 Lotus japonicus
Lsat_1_v5_gn_3_140060 Lactuca sativa
Lsat_1_v5_gn_4_32661 Lactuca sativa
Lsat_1_v5_gn_9_50261 Lactuca sativa
Manes.01G041200 Manihot esculenta
Manes.01G242000 Manihot esculenta
Manes.05G018500 Manihot esculenta
Manes.05G191200 Manihot esculenta
MBI04_g25318_MAGBIO Magnolia biondii
MBI12_g07079_MAGBIO Magnolia biondii
MD00G1036600 Malus domestica
MD01G1227100 Malus domestica
MD07G1156400 Malus domestica
MD07G1297400 Malus domestica
Medtr3g092220 Medicago truncatula
Medtr7g118000 Medicago truncatula
Medtr7g118010 Medicago truncatula
Medtr8g026730 Medicago truncatula
MELO3C005913.2 Cucumis melo
MELO3C005991.2 Cucumis melo
MELO3C022261.2 Cucumis melo
Migut.F00163 Erythranthe guttata
Migut.F00999 Erythranthe guttata
MSTRG.37 Avicennia marina
MSTRG.8619 Avicennia marina
Nitab4.5_0000307g0200 Nicotiana tabacum
Nitab4.5_0000319g0260 Nicotiana tabacum
Nitab4.5_0000319g0270 Nicotiana tabacum
Nitab4.5_0001993g0060 Nicotiana tabacum
Nitab4.5_0001993g0070 Nicotiana tabacum
Nitab4.5_0004404g0010 Nicotiana tabacum
Nitab4.5_0015425g0010 Nicotiana tabacum
Nn1g00397 Nelumbo nucifera
Nn3g18828 Nelumbo nucifera
Oeu017435.2 Olea europaea
Oeu023680.1 Olea europaea
Oeu027327.1 Olea europaea
Oeu037029.1 Olea europaea
Oeu055377.1 Olea europaea
Oeu061019.1 Olea europaea
Os06g0714300 Oryza sativa ssp. japonica
Os10g0510500 Oryza sativa ssp. japonica
Peaxi162Scf00618g00005 Petunia axillaris
Peaxi162Scf00740g00554 Petunia axillaris
Peaxi162Scf00767g00033 Petunia axillaris
PGR042G2473 Punica granatum
PGR142G1225 Punica granatum
PGSC0003DMG400000129 Solanum tuberosum
PGSC0003DMG400003225 Solanum tuberosum
PGSC0003DMG400003226 Solanum tuberosum
PGSC0003DMG400003227 Solanum tuberosum
PGSC0003DMG400003228 Solanum tuberosum
PGSC0003DMG400030231 Solanum tuberosum
PGSC0003DMG400030234 Solanum tuberosum
Phvul.006G116100 Phaseolus vulgaris
Phvul.006G116200 Phaseolus vulgaris
Phvul.009G049900 Phaseolus vulgaris
Phvul.010G117400 Phaseolus vulgaris
Phvul.010G117500 Phaseolus vulgaris
Potri.002G176400 Populus trichocarpa
Potri.012G023400 Populus trichocarpa
Potri.014G103300 Populus trichocarpa
Potri.015G006800 Populus trichocarpa
Prupe.2G194600 Prunus persica
Prupe.2G317100 Prunus persica
Psat3g001040 Pisum sativum
Psat4g215520 Pisum sativum
PSO384G5124 Papaver somniferum
QL08p046555 Quercus lobata
QL09p007442 Quercus lobata
RcHm_v2.0_Chr1g0360781 Rosa chinensis
RcHm_v2.0_Chr1g0382491 Rosa chinensis
Rhsim01G0178100 Rhododendron simsii
Rhsim03G0213700 Rhododendron simsii
Sabra02G0137100 Salix brachista
Sabra12G0010500 Salix brachista
Sabra14G0076000 Salix brachista
Sabra15G0004900 Salix brachista
SalBow4G3133 Salvia bowleyana
Sc01g0002330 Simmondsia chinensis
Sc23g0001910 Simmondsia chinensis
Sed0011897 Sechium edule
Sed0017170 Sechium edule
Sed0018787 Sechium edule
Sed0020765 Sechium edule
SEGI_09263 Sequoiadendron giganteum
SEGI_13877 Sequoiadendron giganteum
SEGI_16093 Sequoiadendron giganteum
SEGI_19510 Sequoiadendron giganteum
SEGI_19650 Sequoiadendron giganteum
SEGI_19956 Sequoiadendron giganteum
SEGI_24640 Sequoiadendron giganteum
SEGI_25660 Sequoiadendron giganteum
SEGI_27359 Sequoiadendron giganteum
SEGI_34377 Sequoiadendron giganteum
SEGI_36277 Sequoiadendron giganteum
SEGI_40429 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08457 Striga asiatica
SGA_v2.0_scaffold44G16837 Striga asiatica
SHI13031 Sapria himalayana
Solyc01g096340.3 Solanum lycopersicum
Solyc03g082510.1 Solanum lycopersicum
Solyc03g082520.1 Solanum lycopersicum
Solyc03g082530.1 Solanum lycopersicum
Solyc06g053260.1 Solanum lycopersicum
Solyc06g053290.1 Solanum lycopersicum
Sopen01g040090 Solanum pennellii
Sopen03g022240 Solanum pennellii
Sopen03g022270 Solanum pennellii
Sopen03g022280 Solanum pennellii
Sopen06g018320 Solanum pennellii
Sopen06g018350 Solanum pennellii
Sp4g28730 Schrenkiella parvula
Sp5g01450 Schrenkiella parvula
Sp6g01250 Schrenkiella parvula
Sp6g15730 Schrenkiella parvula
TAR374G1255 Trochodendron aralioides
TAR375G0509 Trochodendron aralioides
TAR629G0216 Trochodendron aralioides
TAR636G2099 Trochodendron aralioides
THA.LOC104802089 Tarenaya hassleriana
THA.LOC104811894 Tarenaya hassleriana
THA.LOC104815888 Tarenaya hassleriana
THA.LOC104817393 Tarenaya hassleriana
Thecc.01G336000 Theobroma cacao
Thecc.03G206400 Theobroma cacao
Thhalv10001684m.g Eutrema salsugineum
Thhalv10002918m.g Eutrema salsugineum
Thhalv10006318m.g Eutrema salsugineum
Thhalv10015388m.g Eutrema salsugineum
Thhalv10029055m.g Eutrema salsugineum
TPR.G24624 Trifolium pratense
TPR.G32176 Trifolium pratense
TPR.G39309 Trifolium pratense
TPR.G4760 Trifolium pratense
TWI14G0726 Tripterygium wilfordii
TWI23G0535 Tripterygium wilfordii
TWI23G0753 Tripterygium wilfordii
TWI39G0835 Tripterygium wilfordii
TWI59G0136 Tripterygium wilfordii
unitig_52.g17709 Utricularia gibba
vmacro06425 Vaccinium macrocarpon
VMungo0331G0066 Vigna mungo
VMungo0331G1055 Vigna mungo
VMungo0540G0599 Vigna mungo
VMungo1309G0423 Vigna mungo
Zm00001eb043760 Zea mays
Zm00001eb070620 Zea mays
Zm00001eb185010 Zea mays
Zm00001eb227970 Zea mays
Zm00001eb272400 Zea mays
Zm00001eb374060 Zea mays

User provided reference genes

Program Settings