Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p22600 Brassica napus
A07p09380 Brassica napus
A07p09390 Brassica napus
A08p10450 Brassica napus
A08p10460 Brassica napus
Aa31LG2G14400 Aethionema arabicum
Aa31LG9G2380 Aethionema arabicum
Actinidia08497 Actinidia chinensis
Actinidia27167 Actinidia chinensis
Actinidia27168 Actinidia chinensis
Actinidia36966 Actinidia chinensis
Actinidia36967 Actinidia chinensis
Actinidia40185 Actinidia chinensis
Ah.01g008090 Amaranthus hybridus
Ah.13g073830 Amaranthus hybridus
AL7G40890 Arabidopsis lyrata
Aqoxy2G03374 Aquilegia oxysepala
Aqoxy2G03375 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.16DI2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2WN1K3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.640VZ5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6EMH5F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.76MJ1K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8DR635 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JV3LD5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U2IP3E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UPN45K Arachis hypogaea
AT1G31670 Arabidopsis thaliana
AT1G31690 Arabidopsis thaliana
AT1G31710 Arabidopsis thaliana
AT4G14940 Arabidopsis thaliana
Atru.chr4.2482 Acer truncatum
Atru.chr4.2483 Acer truncatum
Atru.chr4.2491 Acer truncatum
Atru.chr4.2587 Acer truncatum
Atru.ctg752_3.109 Acer truncatum
Atru.ctg752_3.94 Acer truncatum
Atru.ctg752_3.98 Acer truncatum
AUR62024020 Chenopodium quinoa
AUR62033611 Chenopodium quinoa
AUR62038612 Chenopodium quinoa
BcaB04g18134 Brassica carinata
BcaB04g18136 Brassica carinata
BcaB06g26926 Brassica carinata
BcaC09g50176 Brassica carinata
BcaNung00317 Brassica carinata
BolC1t02746H Brassica oleracea
BolC7t41944H Brassica oleracea
BraA01t02173Z Brassica rapa
BraA07t28734Z Brassica rapa
BraA08t33044Z Brassica rapa
BraA08t33045Z Brassica rapa
C01p28110 Brassica napus
C07p14460 Brassica napus
CAN.G1324.5 Capsicum annuum
CAN.G1965.4 Capsicum annuum
CAN.G220.56 Capsicum annuum
CAN.G220.57 Capsicum annuum
CAN.G907.11 Capsicum annuum
CAN.G907.8 Capsicum annuum
CARHR221550 Cardamine hirsuta
CARHR286920 Cardamine hirsuta
CARHR286930 Cardamine hirsuta
Carub.0001s3000 Capsella rubella
Carub.0001s3001 Capsella rubella
Carub.0007s2717 Capsella rubella
Ca_10911_v3 Cicer arietinum L.
Ca_10912_v3 Cicer arietinum L.
Ca_21576_v3 Cicer arietinum L.
Ca_21580_v3 Cicer arietinum L.
Cc03_g03630 Coffea canephora
Cc03_g03650 Coffea canephora
Cc03_g03660 Coffea canephora
Cc03_g03670 Coffea canephora
Cfa015629 Carpinus fangiana
Cfa015630 Carpinus fangiana
Cfa015631 Carpinus fangiana
Cfa015633 Carpinus fangiana
Ciclev10004473m.g Citrus clementina
Ciclev10004484m.g Citrus clementina
Ciclev10004511m.g Citrus clementina
Ciclev10006554m.g Citrus clementina
Ciclev10006614m.g Citrus clementina
Ciclev10006722m.g Citrus clementina
CiPaw.02G096400 Carya illinoinensis
CiPaw.02G096500 Carya illinoinensis
CiPaw.02G096700 Carya illinoinensis
CiPaw.02G096800 Carya illinoinensis
ClCG06G006140 Citrullus lanatus
ClCG06G006160 Citrullus lanatus
ClCG06G006180 Citrullus lanatus
COL.COLO4_05312 Corchorus olitorius
COL.COLO4_38064 Corchorus olitorius
COL.COLO4_38071 Corchorus olitorius
COL.COLO4_38073 Corchorus olitorius
COL.COLO4_38078 Corchorus olitorius
COL.COLO4_38079 Corchorus olitorius
Cpa.g.sc58.119 Carica papaya
Cpa.g.sc58.120 Carica papaya
Cpa.g.sc58.121 Carica papaya
CsaV3_6G038130 Cucumis sativus L.
CsaV3_6G038140 Cucumis sativus L.
CsaV3_6G038150 Cucumis sativus L.
CsaV3_7G022600 Cucumis sativus L.
CSS0004880 Camellia sinensis var. sinensis
CSS0012639 Camellia sinensis var. sinensis
CSS0021907 Camellia sinensis var. sinensis
CSS0026868 Camellia sinensis var. sinensis
CSS0032830 Camellia sinensis var. sinensis
CSS0044749 Camellia sinensis var. sinensis
CSS0047236 Camellia sinensis var. sinensis
DCAR_027209 Daucus carota
Dinv13984 Davidia involucrata
Dinv13988 Davidia involucrata
Dinv44519 Davidia involucrata
Dinv44521 Davidia involucrata
Dinv44524 Davidia involucrata
Dinv44525 Davidia involucrata
Dinv44527 Davidia involucrata
Duzib151G0085 Durio zibethinus
Duzib151G0824 Durio zibethinus
Duzib212G0513 Durio zibethinus
Duzib212G0631 Durio zibethinus
ECA233G0083 Erigeron canadensis
EL10Ac3g06429 Beta vulgaris
Eucgr.H03520 Eucalyptus grandis
Eucgr.H03521 Eucalyptus grandis
Eucgr.H03523 Eucalyptus grandis
Eucgr.H03524 Eucalyptus grandis
Eucgr.H03525 Eucalyptus grandis
Eucgr.H03526 Eucalyptus grandis
Eucgr.H03527 Eucalyptus grandis
FAN07G0185 Fragaria x ananassa
FAN07G1206 Fragaria x ananassa
FAN12G1090 Fragaria x ananassa
FAN12G3141 Fragaria x ananassa
FAN22G1103 Fragaria x ananassa
FAN22G2120 Fragaria x ananassa
FAN24G1001 Fragaria x ananassa
FvH4_2g30510 Fragaria vesca
FvH4_4g15340 Fragaria vesca
FvH4_4g15360 Fragaria vesca
FvH4_4g15380 Fragaria vesca
FvH4_4g15390 Fragaria vesca
Glyma.01G062400 Glycine max
Glyma.02G120600 Glycine max
Glyma.10G248700 Glycine max
Glyma.17G019300 Glycine max
Glyma.20G145100 Glycine max
Glyma.20G145200 Glycine max
Glyma.20G145300 Glycine max
Glyma.20G145400 Glycine max
Gohir.A02G031500 Gossypium hirsutum
Gohir.A09G215100 Gossypium hirsutum
Gohir.D02G038200 Gossypium hirsutum
Gohir.D09G217600 Gossypium hirsutum
Gorai.005G042100 Gossypium raimondii
Gorai.006G051500 Gossypium raimondii
Gorai.006G238300 Gossypium raimondii
GSVIVG01017952001 Vitis vinifera
GSVIVG01017954001 Vitis vinifera
GSVIVG01017958001 Vitis vinifera
GSVIVG01017959001 Vitis vinifera
HanXRQChr11g0336571 Helianthus annuus
HanXRQChr11g0336581 Helianthus annuus
Haze_00911 Corylus avellana
Haze_00913 Corylus avellana
Hma1.2p1_0511F.1_g168860 Hydrangea macrophylla
Hma1.2p1_0745F.1_g211920 Hydrangea macrophylla
Hma1.2p1_0745F.1_g211930 Hydrangea macrophylla
Hma1.2p1_0745F.1_g211940 Hydrangea macrophylla
Hma1.2p1_1076F.1_g254610 Hydrangea macrophylla
HPP92_007537 Vanilla planifolia
HPP92_015595 Vanilla planifolia
HPP92_015597 Vanilla planifolia
HPP92_015606 Vanilla planifolia
Lalb_Chr12g0196291 Lupinus albus
Lalb_Chr17g0337241 Lupinus albus
Lj2g0015481 Lotus japonicus
Lj3A738T70 Lonicera japonica
Lj3A738T71 Lonicera japonica
Lj3A738T75 Lonicera japonica
Lj3A993G38 Lonicera japonica
Lj3A994T53 Lonicera japonica
Lj3C738G2 Lonicera japonica
Lj3C738G7 Lonicera japonica
Lj4g0019859 Lotus japonicus
Lj5g0012698 Lotus japonicus
Lj5g0018417 Lotus japonicus
Lsat_1_v5_gn_7_76621 Lactuca sativa
Manes.03G179700 Manihot esculenta
Manes.03G179800 Manihot esculenta
Manes.15G028100 Manihot esculenta
Manes.15G028200 Manihot esculenta
MBI01_g45397_MAGBIO Magnolia biondii
MBI01_g47743_MAGBIO Magnolia biondii
MBI01_g47744_MAGBIO Magnolia biondii
MD13G1191800 Malus domestica
MD16G1191900 Malus domestica
MD16G1192100 Malus domestica
MD16G1192300 Malus domestica
MD16G1192500 Malus domestica
Medtr1g104550 Medicago truncatula
Medtr1g104590 Medicago truncatula
Medtr4g045887 Medicago truncatula
Medtr4g098910 Medicago truncatula
Medtr4g117610 Medicago truncatula
Medtr4g117660 Medicago truncatula
Medtr4g117670 Medicago truncatula
MELO3C014478.2 Cucumis melo
MELO3C014479.2 Cucumis melo
MELO3C014480.2 Cucumis melo
Migut.G00315 Erythranthe guttata
Migut.G00330 Erythranthe guttata
Migut.L00923 Erythranthe guttata
Migut.L00924 Erythranthe guttata
MSTRG.4025 Avicennia marina
MSTRG.9741 Avicennia marina
MSTRG.9991 Avicennia marina
Nitab4.5_0000043g0250 Nicotiana tabacum
Nitab4.5_0000559g0080 Nicotiana tabacum
Nitab4.5_0000932g0040 Nicotiana tabacum
Nitab4.5_0008971g0060 Nicotiana tabacum
Oeu050275.1 Olea europaea
Oeu050276.1 Olea europaea
Os06g0338200 Oryza sativa ssp. japonica
Os06g0338700 Oryza sativa ssp. japonica
Os07g0572050 Oryza sativa ssp. japonica
Os07g0572100 Oryza sativa ssp. japonica
Peaxi162Scf00092g00131 Petunia axillaris
Peaxi162Scf00092g01415 Petunia axillaris
Peaxi162Scf00092g01416 Petunia axillaris
PGR004G0816 Punica granatum
PGSC0003DMG400013432 Solanum tuberosum
PGSC0003DMG400017157 Solanum tuberosum
PGSC0003DMG400017203 Solanum tuberosum
PGSC0003DMG400030082 Solanum tuberosum
PGSC0003DMG400031836 Solanum tuberosum
Phvul.003G040401 Phaseolus vulgaris
Phvul.003G040402 Phaseolus vulgaris
Phvul.003G106200 Phaseolus vulgaris
Phvul.007G056200 Phaseolus vulgaris
Phvul.007G056400 Phaseolus vulgaris
Phvul.007G056500 Phaseolus vulgaris
Phvul.007G056600 Phaseolus vulgaris
Potri.008G151900 Populus trichocarpa
Potri.010G088800 Populus trichocarpa
Potri.010G088900 Populus trichocarpa
Potri.010G089050 Populus trichocarpa
Prupe.1G011900 Prunus persica
Prupe.1G012000 Prunus persica
Prupe.1G012100 Prunus persica
Psat4g032400 Pisum sativum
Psat4g032520 Pisum sativum
Psat6g207200 Pisum sativum
Psat6g207960 Pisum sativum
Psat6g208480 Pisum sativum
PSO063G4136 Papaver somniferum
PSO210G6842 Papaver somniferum
PSO210G7129 Papaver somniferum
PSO528G0192 Papaver somniferum
QL04p071328 Quercus lobata
QL06p002681 Quercus lobata
QL06p002694 Quercus lobata
QL06p002705 Quercus lobata
QL06p002760 Quercus lobata
QL06p002776 Quercus lobata
QL06p002822 Quercus lobata
QL06p002849 Quercus lobata
QL06p002922 Quercus lobata
QL10p030824 Quercus lobata
QL10p030854 Quercus lobata
QL10p030988 Quercus lobata
QL10p031023 Quercus lobata
RcHm_v2.0_Chr4g0416411 Rosa chinensis
RcHm_v2.0_Chr4g0416421 Rosa chinensis
RcHm_v2.0_Chr4g0416431 Rosa chinensis
RcHm_v2.0_Chr4g0416451 Rosa chinensis
RcHm_v2.0_Chr4g0416461 Rosa chinensis
RcHm_v2.0_Chr4g0416501 Rosa chinensis
RcHm_v2.0_Chr5g0045871 Rosa chinensis
Rhsim02G0023200 Rhododendron simsii
Rhsim06G0108900 Rhododendron simsii
Rhsim06G0109000 Rhododendron simsii
Sabra08G0115700 Salix brachista
Sabra10G0054200 Salix brachista
Sabra10G0054300 Salix brachista
SalBow2G0917 Salvia bowleyana
SalBow2G1356 Salvia bowleyana
SalBow2G3512 Salvia bowleyana
Sc25g0004380 Simmondsia chinensis
Sed0003906 Sechium edule
Sed0016469 Sechium edule
Sed0021951 Sechium edule
Sed0027827 Sechium edule
SEGI_26142 Sequoiadendron giganteum
SEGI_30452 Sequoiadendron giganteum
SEGI_30732 Sequoiadendron giganteum
SEGI_33913 Sequoiadendron giganteum
SGA_v2.0_scaffold39G15254 Striga asiatica
SGA_v2.0_scaffold39G15260 Striga asiatica
SGA_v2.0_scaffold39G15262 Striga asiatica
Solyc03g005160.4 Solanum lycopersicum
Solyc09g075930.2 Solanum lycopersicum
Solyc09g075940.3 Solanum lycopersicum
Solyc09g090490.3 Solanum lycopersicum
Sopen03g001170 Solanum pennellii
Sopen09g030760 Solanum pennellii
Sopen09g030770 Solanum pennellii
Sopen09g033410 Solanum pennellii
Sp1g27360 Schrenkiella parvula
Sp7g13090 Schrenkiella parvula
TAR365G0838 Trochodendron aralioides
TAR636G1266 Trochodendron aralioides
TAR636G1336 Trochodendron aralioides
THA.LOC104803024 Tarenaya hassleriana
THA.LOC104808537 Tarenaya hassleriana
THA.LOC104814034 Tarenaya hassleriana
Thecc.04G229400 Theobroma cacao
Thecc.04G229600 Theobroma cacao
Thecc.04G229700 Theobroma cacao
Thecc.04G230200 Theobroma cacao
Thecc.04G230300 Theobroma cacao
Thhalv10006982m.g Eutrema salsugineum
Thhalv10007005m.g Eutrema salsugineum
Thhalv10024636m.g Eutrema salsugineum
TPR.G14900 Trifolium pratense
TPR.G18410 Trifolium pratense
TPR.G28338 Trifolium pratense
TPR.G5484 Trifolium pratense
TPR.G5548 Trifolium pratense
TWI09G0611 Tripterygium wilfordii
TWI09G0966 Tripterygium wilfordii
TWI09G1231 Tripterygium wilfordii
TWI73G1085 Tripterygium wilfordii
unitig_26.g8944 Utricularia gibba
VMungo0720G0330 Vigna mungo
VMungo0720G0646 Vigna mungo
VMungo0720G2275 Vigna mungo
VMungo0720G2745 Vigna mungo
VMungo1215G0192 Vigna mungo
Zm00001eb107350 Zea mays

User provided reference genes

Program Settings