Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p39490 Brassica napus
A08p32550 Brassica napus
A09p03110 Brassica napus
Aa31LG1G1860 Aethionema arabicum
Aa31LG1G8330 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.290__291 Anthoceros agrestis
Actinidia12857 Actinidia chinensis
Actinidia30744 Actinidia chinensis
Actinidia33161 Actinidia chinensis
Ah.02g113040 Amaranthus hybridus
Ah.02g113050 Amaranthus hybridus
Ah.06g187370 Amaranthus hybridus
AL1G24560 Arabidopsis lyrata
AL5G15450 Arabidopsis lyrata
AL8G19870 Arabidopsis lyrata
Aqoxy2G01029 Aquilegia oxysepala
Aqoxy6G00484 Aquilegia oxysepala
Aqoxy7G03263 Aquilegia oxysepala
Aqoxy7G03280 Aquilegia oxysepala
Aqoxy7G03284 Aquilegia oxysepala
Aqoxy7G03285 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8WPY6U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U1H4BJ Arachis hypogaea
AT1G12920 Arabidopsis thaliana
AT3G26618 Arabidopsis thaliana
AT5G47880 Arabidopsis thaliana
ATR0580G421 Amborella trichopoda
ATR0691G187 Amborella trichopoda
ATR0776G106 Amborella trichopoda
Atru.chr12.1061 Acer truncatum
Atru.chr12.1485 Acer truncatum
Atru.chr6.2745 Acer truncatum
Atru.chr6.2746 Acer truncatum
AUR62008333 Chenopodium quinoa
AUR62021766 Chenopodium quinoa
AUR62041252 Chenopodium quinoa
AUR62042842 Chenopodium quinoa
BcaB03g13158 Brassica carinata
BcaB03g13159 Brassica carinata
BcaB07g30050 Brassica carinata
BcaC03g17618 Brassica carinata
BcaC04g23929 Brassica carinata
BcaC05g25142 Brassica carinata
BolC2t11674H Brassica oleracea
BolC5t29780H Brassica oleracea
BolC7t44397H Brassica oleracea
BolC8t49201H Brassica oleracea
BolC9t53251H Brassica oleracea
BraA06t26864Z Brassica rapa
BraA08t35179Z Brassica rapa
BraA09t35949Z Brassica rapa
C02p56180 Brassica napus
C05p10340 Brassica napus
C07p38780 Brassica napus
C08p15740 Brassica napus
CAN.G1190.8 Capsicum annuum
CAN.G1190.9 Capsicum annuum
CAN.G143.15 Capsicum annuum
CAN.G1433.18 Capsicum annuum
CAN.G551.13 Capsicum annuum
CAN.G915.4 Capsicum annuum
CANSAT64G1632 Cannabis sativa
CANSAT64G2204 Cannabis sativa
CANSAT64G2487 Cannabis sativa
CARHR013260 Cardamine hirsuta
CARHR037090 Cardamine hirsuta
CARHR039010 Cardamine hirsuta
CARHR039020 Cardamine hirsuta
CARHR129470 Cardamine hirsuta
CARHR147640 Cardamine hirsuta
CARHR184450 Cardamine hirsuta
CARHR237660 Cardamine hirsuta
CARHR238910 Cardamine hirsuta
Carub.0001s1269 Capsella rubella
Carub.0001s3817 Capsella rubella
Carub.0001s4399 Capsella rubella
Carub.0005s0461 Capsella rubella
Carub.0008s2326 Capsella rubella
Carub.0014s0002 Capsella rubella
Ca_00019_v3 Cicer arietinum L.
Ca_08242_v3 Cicer arietinum L.
CBR_g22389 Chara braunii
Cc02_g09490 Coffea canephora
Cc11_g05170 Coffea canephora
CDE10G0752 Ceratophyllum demersum
Cfa003611 Carpinus fangiana
Cfa008020 Carpinus fangiana
Ciclev10015281m.g Citrus clementina
Ciclev10015328m.g Citrus clementina
Ciclev10028480m.g Citrus clementina
CiPaw.02G142500 Carya illinoinensis
CiPaw.04G007000 Carya illinoinensis
ClCG06G001640 Citrullus lanatus
COL.COLO4_12814 Corchorus olitorius
COL.COLO4_28324 Corchorus olitorius
Cpa.g.sc70.29 Carica papaya
Cpa.g.sc970.2 Carica papaya
Cre13.g587050 Chlamydomonas reinhardtii
CsaV3_4G024700 Cucumis sativus L.
CsaV3_6G007620 Cucumis sativus L.
CSS0028788 Camellia sinensis var. sinensis
CSS0035364 Camellia sinensis var. sinensis
DCAR_002425 Daucus carota
DCAR_010835 Daucus carota
DCAR_024570 Daucus carota
DCAR_030587 Daucus carota
Dinv08410 Davidia involucrata
Dinv13053 Davidia involucrata
Dinv44734 Davidia involucrata
Duzib068G0619 Durio zibethinus
Duzib084G0742 Durio zibethinus
Duzib205G1450 Durio zibethinus
ECA232G0414 Erigeron canadensis
ECA236G2880 Erigeron canadensis
ECA240G2689 Erigeron canadensis
ECA246G4873 Erigeron canadensis
EL10Ac4g08534 Beta vulgaris
EL10Ac5g10900 Beta vulgaris
Eucgr.I01561 Eucalyptus grandis
Eucgr.J01695 Eucalyptus grandis
FAN07G1013 Fragaria x ananassa
FAN12G2322 Fragaria x ananassa
FAN15G3420 Fragaria x ananassa
FAN15G3745 Fragaria x ananassa
FAN17G1101 Fragaria x ananassa
FAN20G0268 Fragaria x ananassa
FAN24G0544 Fragaria x ananassa
FAN24G0937 Fragaria x ananassa
FAN27G0021 Fragaria x ananassa
FAN27G0125 Fragaria x ananassa
FvH4_2g04311 Fragaria vesca
FvH4_2g19650 Fragaria vesca
FvH4_4g22010 Fragaria vesca
Glyma.02G068500 Glycine max
Glyma.09G166000 Glycine max
Glyma.16G044500 Glycine max
Glyma.16G150000 Glycine max
Glyma.16G216100 Glycine max
Glyma.19G107402 Glycine max
Gohir.A03G066500 Gossypium hirsutum
Gohir.A07G177000 Gossypium hirsutum
Gohir.A11G030881 Gossypium hirsutum
Gohir.D03G093100 Gossypium hirsutum
Gohir.D07G182200 Gossypium hirsutum
Gohir.D11G034200 Gossypium hirsutum
Gorai.001G204700 Gossypium raimondii
Gorai.003G097000 Gossypium raimondii
Gorai.007G037000 Gossypium raimondii
GSVIVG01009682001 Vitis vinifera
GSVIVG01026053001 Vitis vinifera
GSVIVG01034491001 Vitis vinifera
HanXRQChr03g0090121 Helianthus annuus
HanXRQChr03g0090131 Helianthus annuus
HanXRQChr05g0162231 Helianthus annuus
HanXRQChr09g0243811 Helianthus annuus
HanXRQChr10g0278511 Helianthus annuus
HanXRQChr13g0418431 Helianthus annuus
HanXRQChr13g0418441 Helianthus annuus
Haze_14038 Corylus avellana
Haze_15915 Corylus avellana
Haze_27276 Corylus avellana
Hma1.2p1_1580F.1_g291910 Hydrangea macrophylla
HPP92_002188 Vanilla planifolia
HPP92_013310 Vanilla planifolia
HPP92_013311 Vanilla planifolia
HPP92_013313 Vanilla planifolia
HPP92_013318 Vanilla planifolia
Hund02685 Selenicereus undatus
Hund09377 Selenicereus undatus
Lalb_Chr02g0156981 Lupinus albus
Lalb_Chr06g0173861 Lupinus albus
Lalb_Chr22g0353901 Lupinus albus
Lj1g0013340 Lotus japonicus
Lj2g0008034 Lotus japonicus
Lj2g0026912 Lotus japonicus
Lj4P108T24 Lonicera japonica
Lj4P711T30 Lonicera japonica
Lj5g0024188 Lotus japonicus
Lsat_1_v5_gn_2_10661 Lactuca sativa
Lsat_1_v5_gn_2_10721 Lactuca sativa
Lsat_1_v5_gn_2_25920 Lactuca sativa
Lsat_1_v5_gn_3_110841 Lactuca sativa
Lsat_1_v5_gn_6_102101 Lactuca sativa
Manes.04G095600 Manihot esculenta
Manes.08G098400 Manihot esculenta
Manes.11G071850 Manihot esculenta
Manes.11G071900 Manihot esculenta
Mapoly0006s0183 Marchantia polymorpha
Mapoly0125s0009 Marchantia polymorpha
MCO05G019 Micromonas commoda
MD06G1115500 Malus domestica
MD07G1033800 Malus domestica
MD10G1170000 Malus domestica
MD10G1170100 Malus domestica
MD13G1135000 Malus domestica
MD16G1130800 Malus domestica
Medtr4g103720 Medicago truncatula
Medtr4g103730 Medicago truncatula
Medtr6g081000 Medicago truncatula
Medtr6g478090 Medicago truncatula
Medtr6g478120 Medicago truncatula
Medtr7g084860 Medicago truncatula
Medtr7g109660 Medicago truncatula
MELO3C003104.2 Cucumis melo
MELO3C022369.2 Cucumis melo
Migut.F00858 Erythranthe guttata
Migut.J00615 Erythranthe guttata
Migut.N03325 Erythranthe guttata
MSTRG.22431 Avicennia marina
MSTRG.25423 Avicennia marina
MSTRG.27556 Avicennia marina
MSTRG.9038 Avicennia marina
MSTRG.9039 Avicennia marina
Nitab4.5_0001036g0080 Nicotiana tabacum
Nitab4.5_0001047g0060 Nicotiana tabacum
Nitab4.5_0002545g0060 Nicotiana tabacum
Nitab4.5_0002587g0020 Nicotiana tabacum
Nitab4.5_0003787g0010 Nicotiana tabacum
Nitab4.5_0005214g0010 Nicotiana tabacum
Nitab4.5_0006719g0010 Nicotiana tabacum
Nitab4.5_0012938g0010 Nicotiana tabacum
Nn1g00961 Nelumbo nucifera
Nn5g27596 Nelumbo nucifera
Nn6g33918 Nelumbo nucifera
Nn7g38133 Nelumbo nucifera
Oeu035282.1 Olea europaea
Oeu039253.1 Olea europaea
Oeu039589.1 Olea europaea
Oeu043806.1 Olea europaea
Oeu062517.2 Olea europaea
Os01g0939500 Oryza sativa ssp. japonica
Os03g0702800 Oryza sativa ssp. japonica
Os05g0373900 Oryza sativa ssp. japonica
Os07g0587400 Oryza sativa ssp. japonica
Peaxi162Scf00038g00036 Petunia axillaris
Peaxi162Scf00125g00041 Petunia axillaris
Peaxi162Scf00177g01114 Petunia axillaris
Peaxi162Scf00519g00044 Petunia axillaris
PGR119G0316 Punica granatum
PGR119G1108 Punica granatum
PGR142G2493 Punica granatum
PGSC0003DMG400007882 Solanum tuberosum
PGSC0003DMG400023496 Solanum tuberosum
PGSC0003DMG401007604 Solanum tuberosum
PGSC0003DMG401011162 Solanum tuberosum
PGSC0003DMG402011162 Solanum tuberosum
Phvul.001G097700 Phaseolus vulgaris
Phvul.004G067400 Phaseolus vulgaris
Phvul.004G141500 Phaseolus vulgaris
Potri.001G072000 Populus trichocarpa
Potri.003G159000 Populus trichocarpa
Potri.014G141000 Populus trichocarpa
Pp3c17_12020 Physcomitrium patens
Pp3c26_1110 Physcomitrium patens
Pp3c9_910 Physcomitrium patens
Pp3c9_950 Physcomitrium patens
PRCOL_00003265 Prasinoderma coloniale
Prupe.1G210300 Prunus persica
Prupe.3G315900 Prunus persica
Prupe.8G207900 Prunus persica
Psat0s2188g0040 Pisum sativum
Psat1g120560 Pisum sativum
PSO210G5981 Papaver somniferum
PSO210G7740 Papaver somniferum
PSO541G0320 Papaver somniferum
PSO675G1124 Papaver somniferum
PSO832G0590 Papaver somniferum
QL03p056148 Quercus lobata
QL04p087096 Quercus lobata
QL05p015587 Quercus lobata
QL05p015727 Quercus lobata
QL09p027607 Quercus lobata
QL09p027623 Quercus lobata
QL09p027633 Quercus lobata
RcHm_v2.0_Chr4g0428211 Rosa chinensis
RcHm_v2.0_Chr6g0253761 Rosa chinensis
RcHm_v2.0_Chr6g0285401 Rosa chinensis
Rhsim06G0086200 Rhododendron simsii
Rhsim07G0200100 Rhododendron simsii
RhsimUnG0073800 Rhododendron simsii
Sabra01G0050600 Salix brachista
Sabra03G0115400 Salix brachista
Sabra14G0106300 Salix brachista
SalBow3G2192 Salvia bowleyana
SalBow4G0396 Salvia bowleyana
SalBow6G3486 Salvia bowleyana
SalBow6G5895 Salvia bowleyana
Sc02g0006390 Simmondsia chinensis
Sc15g0006850 Simmondsia chinensis
Sc15g0006860 Simmondsia chinensis
Sed0003323 Sechium edule
Sed0022800 Sechium edule
SEGI_00424 Sequoiadendron giganteum
SEGI_02591 Sequoiadendron giganteum
SEGI_34243 Sequoiadendron giganteum
SGA_v2.0_scaffold1385G53933 Striga asiatica
SGA_v2.0_scaffold24G10511 Striga asiatica
SGA_v2.0_scaffold272G46361 Striga asiatica
SGA_v2.0_scaffold28G12038 Striga asiatica
SGA_v2.0_scaffold64G21952 Striga asiatica
SHI06234 Sapria himalayana
SHI06299 Sapria himalayana
SMO145G0118 Selaginella moellendorffii
Solyc05g055210.3 Solanum lycopersicum
Solyc07g006130.3 Solanum lycopersicum
Solyc11g006660.3 Solanum lycopersicum
Solyc12g010520.3 Solanum lycopersicum
Sopen05g033650 Solanum pennellii
Sopen07g002240 Solanum pennellii
Sopen11g002590 Solanum pennellii
Sopen12g005530 Solanum pennellii
Sp1g11490 Schrenkiella parvula
Sp2g15730 Schrenkiella parvula
Sp2g18380 Schrenkiella parvula
TAR365G0361 Trochodendron aralioides
TAR622G0002 Trochodendron aralioides
TAR718G0003 Trochodendron aralioides
TAR718G0004 Trochodendron aralioides
THA.LOC104799994 Tarenaya hassleriana
THA.LOC104805291 Tarenaya hassleriana
THA.LOC104807188 Tarenaya hassleriana
THA.LOC104807998 Tarenaya hassleriana
Thecc.01G234300 Theobroma cacao
Thecc.03G085700 Theobroma cacao
Thecc.04G053300 Theobroma cacao
Thhalv10004173m.g Eutrema salsugineum
Thhalv10004248m.g Eutrema salsugineum
Thhalv10007678m.g Eutrema salsugineum
Thhalv10011692m.g Eutrema salsugineum
TPR.G20660 Trifolium pratense
TPR.G24075 Trifolium pratense
TPR.G24482 Trifolium pratense
TWI18G0120 Tripterygium wilfordii
TWI36G0251 Tripterygium wilfordii
TWI75G0009 Tripterygium wilfordii
TWI75G1453 Tripterygium wilfordii
unitig_32.g11900 Utricularia gibba
unitig_736.g22524 Utricularia gibba
unitig_748.g8768 Utricularia gibba
vmacro04771 Vaccinium macrocarpon
vmacro21223 Vaccinium macrocarpon
VMungo0464G0365 Vigna mungo
VMungo0464G1143 Vigna mungo
VMungo1383G1232 Vigna mungo
Zm00001eb108120 Zea mays
Zm00001eb216780 Zea mays
Zm00001eb285170 Zea mays

User provided reference genes

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