Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02940 Brassica napus
A02p44600 Brassica napus
A06p33520 Brassica napus
A06p33540 Brassica napus
A07p03620 Brassica napus
A07p17690 Brassica napus
A09p10210 Brassica napus
Aa31LG1G14670 Aethionema arabicum
Aa31LG6G12730 Aethionema arabicum
Aa31LG7G15620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1639 Anthoceros agrestis
Actinidia16765 Actinidia chinensis
Actinidia17397 Actinidia chinensis
Actinidia22966 Actinidia chinensis
Ah.03g134250 Amaranthus hybridus
AL3G50890 Arabidopsis lyrata
AL472U10020 Arabidopsis lyrata
AL4G10130 Arabidopsis lyrata
AL7G15330 Arabidopsis lyrata
AL8G45360 Arabidopsis lyrata
AL8G45370 Arabidopsis lyrata
AL8G45420 Arabidopsis lyrata
AL8G45580 Arabidopsis lyrata
Aqoxy1G03923 Aquilegia oxysepala
Aqoxy2G01193 Aquilegia oxysepala
Aqoxy6G01902 Aquilegia oxysepala
Aqoxy6G02243 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.40D0U7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.45VXZT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.53RC8Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5BFV3F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6E8E03 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BF1ET6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D6F7EV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JNKN2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MLJ20K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZUQ3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U36RLJ Arachis hypogaea
AT2G17850 Arabidopsis thaliana
AT2G21045 Arabidopsis thaliana
AT4G35770 Arabidopsis thaliana
AT5G66040 Arabidopsis thaliana
AT5G66170 Arabidopsis thaliana
ATR0579G122 Amborella trichopoda
ATR0661G116 Amborella trichopoda
Atru.chr3.824 Acer truncatum
Atru.chr3.833 Acer truncatum
Atru.chr3.925 Acer truncatum
Atru.chr5.3292 Acer truncatum
AUR62003355 Chenopodium quinoa
AUR62013053 Chenopodium quinoa
AUR62026214 Chenopodium quinoa
AUR62026402 Chenopodium quinoa
AUR62029481 Chenopodium quinoa
BcaB02g10046 Brassica carinata
BcaB03g16503 Brassica carinata
BcaB04g20129 Brassica carinata
BcaB08g34731 Brassica carinata
BcaB08g34770 Brassica carinata
BcaC01g02881 Brassica carinata
BcaC03g18428 Brassica carinata
BcaC04g23106 Brassica carinata
BcaC06g34684 Brassica carinata
BcaC06g36279 Brassica carinata
BolC1t00314H Brassica oleracea
BolC2t12558H Brassica oleracea
BolC3t18136H Brassica oleracea
BolC7t40989H Brassica oleracea
BolC9t54100H Brassica oleracea
BraA01t00277Z Brassica rapa
BraA02t09376Z Brassica rapa
BraA06t26291Z Brassica rapa
BraA07t28150Z Brassica rapa
BraA07t29491Z Brassica rapa
BraA09t36666Z Brassica rapa
C01p03290 Brassica napus
C03p58800 Brassica napus
C07p05850 Brassica napus
C07p25640 Brassica napus
C09p12100 Brassica napus
CAN.G1274.17 Capsicum annuum
CAN.G890.20 Capsicum annuum
CANSAT01G2983 Cannabis sativa
CANSAT25G0115 Cannabis sativa
CANSAT25G0875 Cannabis sativa
CANSAT64G0317 Cannabis sativa
CARHR108350 Cardamine hirsuta
CARHR111880 Cardamine hirsuta
CARHR244120 Cardamine hirsuta
CARHR281570 Cardamine hirsuta
CARHR281720 Cardamine hirsuta
Carub.0003s3200 Capsella rubella
Carub.0004s0007 Capsella rubella
Carub.0007s0448 Capsella rubella
Carub.0008s2833 Capsella rubella
Carub.0008s2847 Capsella rubella
Ca_14893_v3 Cicer arietinum L.
Ca_22388_v3 Cicer arietinum L.
Ca_24950_v3 Cicer arietinum L.
Ca_25814_v3 Cicer arietinum L.
Ca_30402_v3 Cicer arietinum L.
Cc07_g10920 Coffea canephora
Cc07_g11430 Coffea canephora
CDE05G0035 Ceratophyllum demersum
CDE05G2595 Ceratophyllum demersum
CDE05G3293 Ceratophyllum demersum
CDE09G1247 Ceratophyllum demersum
Cfa006986 Carpinus fangiana
Cfa007039 Carpinus fangiana
Ciclev10026577m.g Citrus clementina
Ciclev10026691m.g Citrus clementina
Ciclev10030310m.g Citrus clementina
CiPaw.05G080300 Carya illinoinensis
CiPaw.07G005800 Carya illinoinensis
CiPaw.08G129300 Carya illinoinensis
ClCG01G020660 Citrullus lanatus
ClCG02G011800 Citrullus lanatus
COL.COLO4_22508 Corchorus olitorius
COL.COLO4_26068 Corchorus olitorius
COL.COLO4_38364 Corchorus olitorius
Cpa.g.sc37.162 Carica papaya
Cpa.g.sc6.271 Carica papaya
Cpa.g.sc6.325 Carica papaya
Cre10.g444500 Chlamydomonas reinhardtii
CsaV3_2G015960 Cucumis sativus L.
CsaV3_6G047260 Cucumis sativus L.
CsaV3_6G047570 Cucumis sativus L.
CSS0021764 Camellia sinensis var. sinensis
CSS0031503 Camellia sinensis var. sinensis
CSS0036369 Camellia sinensis var. sinensis
DCAR_011532 Daucus carota
DCAR_016597 Daucus carota
DCAR_016598 Daucus carota
Dinv04941 Davidia involucrata
Dinv14089 Davidia involucrata
Dinv40099 Davidia involucrata
Dinv40153 Davidia involucrata
Duzib093G0726 Durio zibethinus
Duzib093G1669 Durio zibethinus
Duzib147G0960 Durio zibethinus
Duzib264G1271 Durio zibethinus
ECA238G1415 Erigeron canadensis
ECA238G3033 Erigeron canadensis
ECA240G0271 Erigeron canadensis
ECA246G2392 Erigeron canadensis
EL10Ac6g13339 Beta vulgaris
EL10Ac6g15488 Beta vulgaris
Eucgr.E01127 Eucalyptus grandis
Eucgr.F03525 Eucalyptus grandis
Eucgr.I02289 Eucalyptus grandis
Eucgr.L00782 Eucalyptus grandis
FAN14G2910 Fragaria x ananassa
FAN19G1843 Fragaria x ananassa
FAN23G0293 Fragaria x ananassa
FAN26G0232 Fragaria x ananassa
FAN26G0734 Fragaria x ananassa
FAN28G0379 Fragaria x ananassa
FvH4_1g10930 Fragaria vesca
FvH4_1g11640 Fragaria vesca
FvH4_6g39880 Fragaria vesca
Glyma.01G161500 Glycine max
Glyma.01G165300 Glycine max
Glyma.02G047000 Glycine max
Glyma.11G077900 Glycine max
Glyma.11G082300 Glycine max
Glyma.12G017900 Glycine max
Glyma.16G126500 Glycine max
Gohir.A11G042200 Gossypium hirsutum
Gohir.A12G058200 Gossypium hirsutum
Gohir.A13G122500 Gossypium hirsutum
Gohir.D11G045700 Gossypium hirsutum
Gohir.D12G058100 Gossypium hirsutum
Gohir.D13G126600 Gossypium hirsutum
Gorai.007G049000 Gossypium raimondii
Gorai.008G061400 Gossypium raimondii
Gorai.013G141700 Gossypium raimondii
GSVIVG01002334001 Vitis vinifera
GSVIVG01006533001 Vitis vinifera
GSVIVG01018758001 Vitis vinifera
GSVIVG01018759001 Vitis vinifera
GSVIVG01018760001 Vitis vinifera
HanXRQChr13g0414631 Helianthus annuus
HanXRQChr14g0441831 Helianthus annuus
HanXRQChr16g0531631 Helianthus annuus
HanXRQChr17g0553951 Helianthus annuus
Haze_03690 Corylus avellana
Haze_12427 Corylus avellana
Hma1.2p1_0163F.1_g072310 Hydrangea macrophylla
Hma1.2p1_0315F.1_g122680 Hydrangea macrophylla
HPP92_008457 Vanilla planifolia
HPP92_012960 Vanilla planifolia
Hund06423 Selenicereus undatus
Hund14053 Selenicereus undatus
Hund14176 Selenicereus undatus
Lalb_Chr03g0024421 Lupinus albus
Lalb_Chr05g0212351 Lupinus albus
Lalb_Chr05g0229801 Lupinus albus
Lalb_Chr16g0377301 Lupinus albus
Lj2g0010022 Lotus japonicus
Lj2g0011509 Lotus japonicus
Lj4g0016005 Lotus japonicus
Lj4g0020054 Lotus japonicus
Lj6g0007343 Lotus japonicus
Lsat_1_v5_gn_2_76060 Lactuca sativa
Lsat_1_v5_gn_2_76100 Lactuca sativa
Lsat_1_v5_gn_3_70661 Lactuca sativa
Lsat_1_v5_gn_5_63360 Lactuca sativa
Manes.01G147900 Manihot esculenta
Manes.01G151800 Manihot esculenta
Manes.02G111200 Manihot esculenta
Mapoly0041s0102 Marchantia polymorpha
MBI08_g41939_MAGBIO Magnolia biondii
MBI09_g14147_MAGBIO Magnolia biondii
MD02G1122400 Malus domestica
MD02G1129500 Malus domestica
MD09G1135800 Malus domestica
MD15G1236600 Malus domestica
MD15G1243800 Malus domestica
Medtr2g017630 Medicago truncatula
Medtr2g059890 Medicago truncatula
Medtr5g022390 Medicago truncatula
Medtr5g023170 Medicago truncatula
Medtr8g075420 Medicago truncatula
MELO3C005208.2 Cucumis melo
MELO3C007917.2 Cucumis melo
MELO3C007949.2 Cucumis melo
MELO3C020807.2 Cucumis melo
MELO3C027611.2 Cucumis melo
MELO3C032980.2 Cucumis melo
MELO3C033071.2 Cucumis melo
Migut.H00696 Erythranthe guttata
Migut.H02165 Erythranthe guttata
Migut.L00693 Erythranthe guttata
Migut.L00809 Erythranthe guttata
Migut.L00904 Erythranthe guttata
MSTRG.15579 Avicennia marina
MSTRG.15587 Avicennia marina
MSTRG.2721 Avicennia marina
MSTRG.3614 Avicennia marina
Nitab4.5_0000271g0340 Nicotiana tabacum
Nitab4.5_0000864g0240 Nicotiana tabacum
Nitab4.5_0001696g0140 Nicotiana tabacum
Nitab4.5_0005102g0030 Nicotiana tabacum
Nitab4.5_0006808g0020 Nicotiana tabacum
Nitab4.5_0007439g0020 Nicotiana tabacum
Nn5g30732 Nelumbo nucifera
Nn5g30733 Nelumbo nucifera
Nn5g30867 Nelumbo nucifera
Nn6g32027 Nelumbo nucifera
Oeu038757.1 Olea europaea
Oeu060372.1 Olea europaea
Os02g0102300 Oryza sativa ssp. japonica
Os02g0157600 Oryza sativa ssp. japonica
Os04g0249600 Oryza sativa ssp. japonica
Os06g0725000 Oryza sativa ssp. japonica
Os12g0428000 Oryza sativa ssp. japonica
Peaxi162Scf00300g00015 Petunia axillaris
Peaxi162Scf00328g00830 Petunia axillaris
Peaxi162Scf01329g00017 Petunia axillaris
PGR031G3839 Punica granatum
PGR102G0803 Punica granatum
PGR119G1572 Punica granatum
PGR142G1340 Punica granatum
PGSC0003DMG400003573 Solanum tuberosum
PGSC0003DMG400003666 Solanum tuberosum
PGSC0003DMG400027000 Solanum tuberosum
Phvul.002G107700 Phaseolus vulgaris
Phvul.002G112600 Phaseolus vulgaris
Phvul.003G264200 Phaseolus vulgaris
Phvul.011G020400 Phaseolus vulgaris
Potri.002G014900 Populus trichocarpa
Potri.005G106400 Populus trichocarpa
Potri.005G111200 Populus trichocarpa
Potri.014G131300 Populus trichocarpa
Pp3c16_18500 Physcomitrium patens
Pp3c16_18502 Physcomitrium patens
Pp3c2_37990 Physcomitrium patens
PRCOL_00004205 Prasinoderma coloniale
Prupe.3G190900 Prunus persica
Prupe.7G170100 Prunus persica
Prupe.7G176200 Prunus persica
Psat2g151400 Pisum sativum
Psat2g153680 Pisum sativum
Psat2g153800 Pisum sativum
Psat2g153840 Pisum sativum
Psat4g100800 Pisum sativum
Psat7g155120 Pisum sativum
Psat7g169720 Pisum sativum
PSO541G3253 Papaver somniferum
PSO541G5483 Papaver somniferum
PSO675G3955 Papaver somniferum
PSO675G4677 Papaver somniferum
PSO675G5687 Papaver somniferum
PSO675G8773 Papaver somniferum
QL06p050815 Quercus lobata
QL06p052310 Quercus lobata
QL11p049930 Quercus lobata
RcHm_v2.0_Chr2g0098191 Rosa chinensis
RcHm_v2.0_Chr2g0099231 Rosa chinensis
RcHm_v2.0_Chr2g0154401 Rosa chinensis
Rhsim10G0210900 Rhododendron simsii
Sabra02G0011900 Salix brachista
Sabra05G0087300 Salix brachista
Sabra13G0044300 Salix brachista
Sabra14G0097700 Salix brachista
SalBow3G4573 Salvia bowleyana
SalBow5G1927 Salvia bowleyana
SalBow5G3834 Salvia bowleyana
Sc07g0001230 Simmondsia chinensis
Sc14g0002220 Simmondsia chinensis
Sed0000964 Sechium edule
Sed0010125 Sechium edule
Sed0023607 Sechium edule
Sed0026835 Sechium edule
SEGI_27556 Sequoiadendron giganteum
SGA_v2.0_scaffold2G00977 Striga asiatica
SGA_v2.0_scaffold98G29359 Striga asiatica
SMO117G0065 Selaginella moellendorffii
SMO367G0301 Selaginella moellendorffii
Solyc02g083280.4 Solanum lycopersicum
Solyc02g083730.4 Solanum lycopersicum
Solyc06g073583.1 Solanum lycopersicum
Sopen02g028070 Solanum pennellii
Sopen02g028510 Solanum pennellii
Sopen06g029950 Solanum pennellii
Sp2g30520 Schrenkiella parvula
Sp2g30650 Schrenkiella parvula
Sp3g30740 Schrenkiella parvula
Sp3g31310 Schrenkiella parvula
Sp7g33530 Schrenkiella parvula
TAR381G0157 Trochodendron aralioides
TAR381G1415 Trochodendron aralioides
TAR625G1480 Trochodendron aralioides
THA.LOC104807518 Tarenaya hassleriana
THA.LOC104807820 Tarenaya hassleriana
THA.LOC104819175 Tarenaya hassleriana
THA.LOC104819746 Tarenaya hassleriana
THA.LOC104821348 Tarenaya hassleriana
THA.LOC104826589 Tarenaya hassleriana
Thecc.01G010200 Theobroma cacao
Thecc.01G016300 Theobroma cacao
Thecc.07G169300 Theobroma cacao
Thecc.08G053300 Theobroma cacao
Thhalv10005068m.g Eutrema salsugineum
Thhalv10005118m.g Eutrema salsugineum
Thhalv10022891m.g Eutrema salsugineum
Thhalv10022902m.g Eutrema salsugineum
Thhalv10026337m.g Eutrema salsugineum
TPR.G20809 Trifolium pratense
TPR.G25142 Trifolium pratense
TPR.G31335 Trifolium pratense
TPR.G31338 Trifolium pratense
TPR.G31341 Trifolium pratense
TPR.G8346 Trifolium pratense
TWI09G0898 Tripterygium wilfordii
TWI73G0923 Tripterygium wilfordii
TWI73G1115 Tripterygium wilfordii
TWI75G0192 Tripterygium wilfordii
unitig_8.g3576 Utricularia gibba
unitig_899.g14717 Utricularia gibba
vmacro20501 Vaccinium macrocarpon
vmacro22142 Vaccinium macrocarpon
VMungo0251G0423 Vigna mungo
VMungo1127G1350 Vigna mungo
VMungo1215G0838 Vigna mungo
VMungo1215G2792 Vigna mungo
Zm00001eb207830 Zea mays
Zm00001eb210000 Zea mays
Zm00001eb228330 Zea mays
Zm00001eb420080 Zea mays

User provided reference genes

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