Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p31430 Brassica napus
A06p04700 Brassica napus
A09p18920 Brassica napus
A09p68700 Brassica napus
A10p01250 Brassica napus
Aa31LG10G5630 Aethionema arabicum
Aa31LG1G10090 Aethionema arabicum
Actinidia02517 Actinidia chinensis
Actinidia06379 Actinidia chinensis
Actinidia07521 Actinidia chinensis
Actinidia16889 Actinidia chinensis
Actinidia17939 Actinidia chinensis
Actinidia21365 Actinidia chinensis
Actinidia35503 Actinidia chinensis
Actinidia37694 Actinidia chinensis
Ah.02g127180 Amaranthus hybridus
Ah.06g189350 Amaranthus hybridus
Ah.06g196300 Amaranthus hybridus
Ah.11g045730 Amaranthus hybridus
AL1G11800 Arabidopsis lyrata
AL1G54670 Arabidopsis lyrata
AL1G66670 Arabidopsis lyrata
AL6G51400 Arabidopsis lyrata
Aqoxy2G02590 Aquilegia oxysepala
Aqoxy2G02593 Aquilegia oxysepala
Aqoxy5G02749 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.08SQ5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.09Q3UX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CCG5WH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DB5XKD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNQZ69 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LS23Q4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P85M38 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SYXA4Q Arachis hypogaea
AT1G02460 Arabidopsis thaliana
AT1G48100 Arabidopsis thaliana
AT1G56710 Arabidopsis thaliana
AT4G01890 Arabidopsis thaliana
ATR0693G120 Amborella trichopoda
ATR0693G423 Amborella trichopoda
Atru.chr4.3072 Acer truncatum
Atru.chr4.3073 Acer truncatum
Atru.chr5.919 Acer truncatum
AUR62000446 Chenopodium quinoa
AUR62002580 Chenopodium quinoa
AUR62006794 Chenopodium quinoa
AUR62011744 Chenopodium quinoa
AUR62024577 Chenopodium quinoa
AUR62030002 Chenopodium quinoa
BcaB01g02387 Brassica carinata
BcaB03g15775 Brassica carinata
BcaB03g15777 Brassica carinata
BcaB07g31139 Brassica carinata
BcaB07g33790 Brassica carinata
BcaC01g06798 Brassica carinata
BcaC04g22078 Brassica carinata
BcaC07g42310 Brassica carinata
BcaC07g42394 Brassica carinata
BcaNung05213 Brassica carinata
BolC3t16116H Brassica oleracea
BolC5t28908H Brassica oleracea
BolC6t35379H Brassica oleracea
BolC8t52841H Brassica oleracea
BolC9t55299H Brassica oleracea
BraA03t12324Z Brassica rapa
BraA06t23673Z Brassica rapa
BraA09t37512Z Brassica rapa
BraA09t42209Z Brassica rapa
BraA10t42403Z Brassica rapa
C03p38360 Brassica napus
C03p38390 Brassica napus
C03p38420 Brassica napus
C05p01250 Brassica napus
C06p02510 Brassica napus
C08p53260 Brassica napus
C09p23750 Brassica napus
CAN.G100.20 Capsicum annuum
CAN.G1374.7 Capsicum annuum
CAN.G74.44 Capsicum annuum
CAN.G74.46 Capsicum annuum
CANSAT25G3798 Cannabis sativa
CANSAT54G2062 Cannabis sativa
CANSAT78G0934 Cannabis sativa
CARHR001780 Cardamine hirsuta
CARHR037740 Cardamine hirsuta
CARHR054800 Cardamine hirsuta
CARHR249860 Cardamine hirsuta
Carub.0001s0153 Capsella rubella
Carub.0001s3720 Capsella rubella
Carub.0002s0718 Capsella rubella
Carub.0006s3534 Capsella rubella
Ca_00940_v3 Cicer arietinum L.
Ca_09233_v3 Cicer arietinum L.
Ca_10257_v3 Cicer arietinum L.
Ca_18239_v3 Cicer arietinum L.
CBR_g24342 Chara braunii
Cc02_g35490 Coffea canephora
Cc03_g14380 Coffea canephora
CDE02G2955 Ceratophyllum demersum
CDE08G0755 Ceratophyllum demersum
CDE09G0551 Ceratophyllum demersum
Cfa004868 Carpinus fangiana
Cfa006737 Carpinus fangiana
Cfa006738 Carpinus fangiana
Cfa015700 Carpinus fangiana
Ciclev10004899m.g Citrus clementina
Ciclev10024556m.g Citrus clementina
CiPaw.01G132600 Carya illinoinensis
CiPaw.02G071600 Carya illinoinensis
CiPaw.07G033900 Carya illinoinensis
CiPaw.07G122300 Carya illinoinensis
ClCG06G004310 Citrullus lanatus
ClCG09G004790 Citrullus lanatus
ClCG10G011720 Citrullus lanatus
COL.COLO4_05495 Corchorus olitorius
COL.COLO4_23171 Corchorus olitorius
COL.COLO4_34532 Corchorus olitorius
Cpa.g.sc146.54 Carica papaya
Cpa.g.sc428.6 Carica papaya
Cpa.g.sc733.1 Carica papaya
CsaV3_3G031630 Cucumis sativus L.
CsaV3_6G000090 Cucumis sativus L.
CsaV3_7G030290 Cucumis sativus L.
CSS0006393 Camellia sinensis var. sinensis
CSS0006978 Camellia sinensis var. sinensis
CSS0011409 Camellia sinensis var. sinensis
CSS0016898 Camellia sinensis var. sinensis
CSS0017976 Camellia sinensis var. sinensis
CSS0036711 Camellia sinensis var. sinensis
CSS0045530 Camellia sinensis var. sinensis
CSS0049100 Camellia sinensis var. sinensis
CSS0049420 Camellia sinensis var. sinensis
DCAR_002533 Daucus carota
DCAR_002922 Daucus carota
DCAR_005272 Daucus carota
DCAR_026962 Daucus carota
Dinv12106 Davidia involucrata
Dinv15614 Davidia involucrata
Dinv24493 Davidia involucrata
Dinv29543 Davidia involucrata
Dinv30928 Davidia involucrata
Duzib138G1018 Durio zibethinus
Duzib151G0005 Durio zibethinus
Duzib177G0822 Durio zibethinus
ECA236G2112 Erigeron canadensis
ECA240G0731 Erigeron canadensis
ECA247G1036 Erigeron canadensis
EL10Ac3g06282 Beta vulgaris
EL10Ac4g09529 Beta vulgaris
EL10As5g23590 Beta vulgaris
Eucgr.H00895 Eucalyptus grandis
Eucgr.H01308 Eucalyptus grandis
Eucgr.H04092 Eucalyptus grandis
FAN02G0707 Fragaria x ananassa
FAN07G2225 Fragaria x ananassa
FAN09G4300 Fragaria x ananassa
FAN12G1354 Fragaria x ananassa
FAN14G4244 Fragaria x ananassa
FAN17G0184 Fragaria x ananassa
FAN19G2106 Fragaria x ananassa
FAN23G0741 Fragaria x ananassa
FAN23G1929 Fragaria x ananassa
FAN26G2430 Fragaria x ananassa
FAN28G0456 Fragaria x ananassa
FvH4_1g26650 Fragaria vesca
FvH4_4g20990 Fragaria vesca
FvH4_6g08130 Fragaria vesca
Glyma.02G009300 Glycine max
Glyma.03G222500 Glycine max
Glyma.05G133400 Glycine max
Glyma.08G087900 Glycine max
Glyma.09G031600 Glycine max
Glyma.10G010000 Glycine max
Glyma.15G136700 Glycine max
Glyma.19G219700 Glycine max
Glyma.19G226500 Glycine max
Gohir.A02G085800 Gossypium hirsutum
Gohir.A09G241700 Gossypium hirsutum
Gohir.A11G106900 Gossypium hirsutum
Gohir.A12G122100 Gossypium hirsutum
Gohir.A13G177250 Gossypium hirsutum
Gohir.D02G062100 Gossypium hirsutum
Gohir.D09G242400 Gossypium hirsutum
Gohir.D11G111900 Gossypium hirsutum
Gohir.D12G125700 Gossypium hirsutum
Gohir.D13G183800 Gossypium hirsutum
Gorai.005G069900 Gossypium raimondii
Gorai.006G266100 Gossypium raimondii
Gorai.007G120000 Gossypium raimondii
Gorai.008G136700 Gossypium raimondii
Gorai.013G209100 Gossypium raimondii
GSVIVG01017644001 Vitis vinifera
GSVIVG01028189001 Vitis vinifera
GSVIVG01031298001 Vitis vinifera
HanXRQChr01g0006331 Helianthus annuus
HanXRQChr10g0303181 Helianthus annuus
HanXRQChr15g0464311 Helianthus annuus
Haze_00815 Corylus avellana
Haze_04021 Corylus avellana
Haze_05108 Corylus avellana
Hma1.2p1_1096F.1_g256680 Hydrangea macrophylla
Hma1.2p1_1553F.1_g290300 Hydrangea macrophylla
HPP92_001219 Vanilla planifolia
HPP92_012775 Vanilla planifolia
HPP92_017294 Vanilla planifolia
Hund12242 Selenicereus undatus
Lalb_Chr02g0146991 Lupinus albus
Lalb_Chr02g0147651 Lupinus albus
Lalb_Chr04g0260101 Lupinus albus
Lalb_Chr13g0293521 Lupinus albus
Lalb_Chr15g0089021 Lupinus albus
Lalb_Chr18g0058451 Lupinus albus
Lj1g0001225 Lotus japonicus
Lj2A1212T64 Lonicera japonica
Lj3C837T5 Lonicera japonica
Lj4g0004554 Lotus japonicus
Lj4g0021327 Lotus japonicus
Lj5A322T68 Lonicera japonica
Lj5g0009787 Lotus japonicus
Lj6A698T108 Lonicera japonica
Lj6g0013900 Lotus japonicus
Lsat_1_v5_gn_1_40420 Lactuca sativa
Lsat_1_v5_gn_1_40460 Lactuca sativa
Lsat_1_v5_gn_7_65560 Lactuca sativa
Manes.01G232400 Manihot esculenta
Manes.03G209900 Manihot esculenta
Manes.05G011500 Manihot esculenta
Manes.08G108800 Manihot esculenta
MBI18_g09664_MAGBIO Magnolia biondii
MBI18_g25674_MAGBIO Magnolia biondii
MBI18_g40413_MAGBIO Magnolia biondii
MBI18_g40416_MAGBIO Magnolia biondii
MD04G1189500 Malus domestica
MD04G1189600 Malus domestica
MD09G1287300 Malus domestica
MD13G1146600 Malus domestica
MD16G1140500 Malus domestica
MD17G1279500 Malus domestica
Medtr1g086390 Medicago truncatula
Medtr2g032710 Medicago truncatula
Medtr4g094715 Medicago truncatula
Medtr7g110050 Medicago truncatula
MELO3C012916.2 Cucumis melo
MELO3C021245.2 Cucumis melo
MELO3C023627.2 Cucumis melo
Migut.G00217 Erythranthe guttata
Migut.N00961 Erythranthe guttata
MSTRG.10177 Avicennia marina
Nitab4.5_0000222g0230 Nicotiana tabacum
Nitab4.5_0000926g0120 Nicotiana tabacum
Nitab4.5_0002783g0040 Nicotiana tabacum
Nitab4.5_0004218g0040 Nicotiana tabacum
Nitab4.5_0005710g0020 Nicotiana tabacum
Nitab4.5_0006558g0010 Nicotiana tabacum
Nn3g21854 Nelumbo nucifera
Nn3g21855 Nelumbo nucifera
Nn4g25433 Nelumbo nucifera
Nn4g25435 Nelumbo nucifera
Oeu000081.1 Olea europaea
Oeu012202.1 Olea europaea
Oeu029898.1 Olea europaea
Oeu030885.1 Olea europaea
Oeu044744.1 Olea europaea
Os01g0296200 Oryza sativa ssp. japonica
Os01g0329300 Oryza sativa ssp. japonica
Os05g0279900 Oryza sativa ssp. japonica
Peaxi162Scf00058g00138 Petunia axillaris
Peaxi162Scf00357g00524 Petunia axillaris
Peaxi162Scf01240g00005 Petunia axillaris
PGR004G0043 Punica granatum
PGR031G2981 Punica granatum
PGSC0003DMG400002749 Solanum tuberosum
PGSC0003DMG400005204 Solanum tuberosum
PGSC0003DMG400029450 Solanum tuberosum
Phvul.001G215900 Phaseolus vulgaris
Phvul.002G189400 Phaseolus vulgaris
Phvul.006G121300 Phaseolus vulgaris
Phvul.007G211400 Phaseolus vulgaris
Potri.002G190600 Populus trichocarpa
Potri.005G005500 Populus trichocarpa
Potri.008G100500 Populus trichocarpa
Potri.010G152000 Populus trichocarpa
Potri.013G005000 Populus trichocarpa
Potri.014G115700 Populus trichocarpa
Pp3c18_2210 Physcomitrium patens
Prupe.1G110100 Prunus persica
Prupe.3G005900 Prunus persica
Prupe.6G307200 Prunus persica
Prupe.6G307300 Prunus persica
Prupe.6G307400 Prunus persica
Psat3g017720 Pisum sativum
Psat6g159560 Pisum sativum
Psat7g017960 Pisum sativum
Psat7g085800 Pisum sativum
PSO170G5565 Papaver somniferum
PSO210G1727 Papaver somniferum
PSO210G2750 Papaver somniferum
PSO357G0530 Papaver somniferum
PSO761G0217 Papaver somniferum
PSO761G0505 Papaver somniferum
QL03p008969 Quercus lobata
QL03p012940 Quercus lobata
QL06p013572 Quercus lobata
RcHm_v2.0_Chr3g0457981 Rosa chinensis
RcHm_v2.0_Chr3g0486841 Rosa chinensis
RcHm_v2.0_Chr4g0426531 Rosa chinensis
Rhsim02G0001000 Rhododendron simsii
Rhsim11G0099500 Rhododendron simsii
Sabra02G0164900 Salix brachista
Sabra08G0076000 Salix brachista
Sabra10G0117100 Salix brachista
Sabra13G0004000 Salix brachista
SalBow3G0533 Salvia bowleyana
SalBow6G1473 Salvia bowleyana
SalBow8G5053 Salvia bowleyana
Sc13g0007700 Simmondsia chinensis
Sc16g0009280 Simmondsia chinensis
Sc17g0000250 Simmondsia chinensis
Sed0002560 Sechium edule
Sed0004566 Sechium edule
Sed0006219 Sechium edule
SEGI_03291 Sequoiadendron giganteum
SEGI_15968 Sequoiadendron giganteum
SEGI_18620 Sequoiadendron giganteum
SGA_v2.0_scaffold147G36382 Striga asiatica
SGA_v2.0_scaffold157G37372 Striga asiatica
SGA_v2.0_scaffold5G02906 Striga asiatica
SGA_v2.0_scaffold80G25703 Striga asiatica
Solyc01g079130.2 Solanum lycopersicum
Solyc01g100980.4 Solanum lycopersicum
Solyc04g008230.3 Solanum lycopersicum
Sopen01g030900 Solanum pennellii
Sopen01g044440 Solanum pennellii
Sopen04g003350 Solanum pennellii
Sp1g01530 Schrenkiella parvula
Sp1g35060 Schrenkiella parvula
Sp6g01740 Schrenkiella parvula
TAR362G0230 Trochodendron aralioides
TAR362G1214 Trochodendron aralioides
TAR365G1075 Trochodendron aralioides
THA.LOC104801316 Tarenaya hassleriana
THA.LOC104816847 Tarenaya hassleriana
THA.LOC104821805 Tarenaya hassleriana
Thecc.01G321100 Theobroma cacao
Thecc.04G308700 Theobroma cacao
Thecc.05G327300 Theobroma cacao
Thhalv10007481m.g Eutrema salsugineum
Thhalv10011452m.g Eutrema salsugineum
Thhalv10023906m.g Eutrema salsugineum
Thhalv10029273m.g Eutrema salsugineum
TPR.G30808 Trifolium pratense
TPR.G3090 Trifolium pratense
TPR.G31235 Trifolium pratense
TPR.G31244 Trifolium pratense
TPR.G4140 Trifolium pratense
TWI12G0928 Tripterygium wilfordii
TWI23G0650 Tripterygium wilfordii
TWI36G0163 Tripterygium wilfordii
TWI73G0206 Tripterygium wilfordii
unitig_88.g27787 Utricularia gibba
vmacro01594 Vaccinium macrocarpon
vmacro15161 Vaccinium macrocarpon
VMungo0251G3054 Vigna mungo
VMungo0540G1613 Vigna mungo
VMungo0720G0695 Vigna mungo
VMungo1383G2028 Vigna mungo
Zm00001eb129970 Zea mays
Zm00001eb131090 Zea mays
Zm00001eb339720 Zea mays
Zm00001eb340640 Zea mays

User provided reference genes

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