Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20280 Brassica napus
A03p50190 Brassica napus
A03p50260 Brassica napus
Aa31LG2G13110 Aethionema arabicum
Actinidia02191 Actinidia chinensis
Actinidia10878 Actinidia chinensis
Actinidia25907 Actinidia chinensis
Actinidia25941 Actinidia chinensis
Actinidia31474 Actinidia chinensis
Ah.12g053700 Amaranthus hybridus
Ah.12g054020 Amaranthus hybridus
AL7G37690 Arabidopsis lyrata
Aqoxy3G02666 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03I7QG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1RS262 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2R861R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8F301T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.94M3J9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9WN3VV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DXW5L8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EZLY4J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6M0GC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GQ70X8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K3RZS0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NFFN58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NU762S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PH2T15 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QUB6RF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V6BW8K Arachis hypogaea
AT4G17030 Arabidopsis thaliana
ATR0665G338 Amborella trichopoda
ATR0665G566 Amborella trichopoda
Atru.chr6.1781 Acer truncatum
Atru.chr9.1217 Acer truncatum
AUR62007066 Chenopodium quinoa
AUR62007160 Chenopodium quinoa
AUR62007161 Chenopodium quinoa
AUR62007220 Chenopodium quinoa
AUR62018781 Chenopodium quinoa
AUR62018845 Chenopodium quinoa
AUR62018846 Chenopodium quinoa
AUR62018849 Chenopodium quinoa
AUR62018850 Chenopodium quinoa
AUR62019931 Chenopodium quinoa
BcaC06g33520 Brassica carinata
BcaC09g50436 Brassica carinata
BcaNung00132 Brassica carinata
BcaNung00133 Brassica carinata
BolC1t02495H Brassica oleracea
BolC7t45358H Brassica oleracea
BraA01t01955Z Brassica rapa
BraA03t14115Z Brassica rapa
C01p25430 Brassica napus
C07p48310 Brassica napus
C07p48360 Brassica napus
C07p48440 Brassica napus
C07p48500 Brassica napus
CAN.G422.18 Capsicum annuum
CAN.G422.19 Capsicum annuum
CAN.G572.2 Capsicum annuum
CAN.G572.3 Capsicum annuum
CAN.G572.39 Capsicum annuum
CAN.G572.4 Capsicum annuum
CAN.G761.8 Capsicum annuum
CAN.G761.9 Capsicum annuum
CAN.G845.30 Capsicum annuum
CANSAT21G0230 Cannabis sativa
CANSAT21G0278 Cannabis sativa
CANSAT21G0387 Cannabis sativa
CANSAT21G0476 Cannabis sativa
CANSAT21G1365 Cannabis sativa
CANSAT21G1585 Cannabis sativa
CARHR223590 Cardamine hirsuta
Carub.0007s2439 Capsella rubella
Ca_22041_v3 Cicer arietinum L.
Ca_24611_v3 Cicer arietinum L.
Cc08_g01830 Coffea canephora
Cc08_g01860 Coffea canephora
Cc08_g11380 Coffea canephora
Cc08_g11390 Coffea canephora
Cc08_g11400 Coffea canephora
Cc08_g11410 Coffea canephora
Cc08_g11420 Coffea canephora
Cfa012378 Carpinus fangiana
Cfa012675 Carpinus fangiana
Ciclev10002142m.g Citrus clementina
Ciclev10021884m.g Citrus clementina
Ciclev10024410m.g Citrus clementina
Ciclev10024449m.g Citrus clementina
Ciclev10032508m.g Citrus clementina
CiPaw.11G077700 Carya illinoinensis
CiPaw.11G078000 Carya illinoinensis
CiPaw.11G078400 Carya illinoinensis
CiPaw.11G078500 Carya illinoinensis
CiPaw.11G078600 Carya illinoinensis
CiPaw.11G087300 Carya illinoinensis
CiPaw.12G060000 Carya illinoinensis
ClCG09G012380 Citrullus lanatus
ClCG09G012750 Citrullus lanatus
COL.COLO4_07503 Corchorus olitorius
COL.COLO4_17115 Corchorus olitorius
Cpa.g.c34171 Carica papaya
CsaV3_3G049550 Cucumis sativus L.
CsaV3_3G049810 Cucumis sativus L.
CSS0000276 Camellia sinensis var. sinensis
CSS0008225 Camellia sinensis var. sinensis
CSS0012644 Camellia sinensis var. sinensis
CSS0013120 Camellia sinensis var. sinensis
CSS0019143 Camellia sinensis var. sinensis
CSS0020678 Camellia sinensis var. sinensis
CSS0026897 Camellia sinensis var. sinensis
CSS0030189 Camellia sinensis var. sinensis
CSS0032001 Camellia sinensis var. sinensis
CSS0034932 Camellia sinensis var. sinensis
CSS0040758 Camellia sinensis var. sinensis
CSS0047214 Camellia sinensis var. sinensis
DCAR_008331 Daucus carota
DCAR_024979 Daucus carota
DCAR_024980 Daucus carota
Dinv21696 Davidia involucrata
Dinv25181 Davidia involucrata
Dinv28871 Davidia involucrata
Dinv28912 Davidia involucrata
Duzib084G0514 Durio zibethinus
Duzib084G1276 Durio zibethinus
Duzib205G0382 Durio zibethinus
Duzib205G1455 Durio zibethinus
ECA233G5116 Erigeron canadensis
ECA246G1502 Erigeron canadensis
EL10Ac5g12278 Beta vulgaris
EL10Ac5g12279 Beta vulgaris
EL10As14g24076 Beta vulgaris
Eucgr.E00317 Eucalyptus grandis
Eucgr.E00357 Eucalyptus grandis
Eucgr.E00358 Eucalyptus grandis
Eucgr.E00360 Eucalyptus grandis
FAN04G3085 Fragaria x ananassa
FAN08G3206 Fragaria x ananassa
FAN08G3619 Fragaria x ananassa
FAN13G1006 Fragaria x ananassa
FAN13G2591 Fragaria x ananassa
FAN18G1157 Fragaria x ananassa
FAN18G3320 Fragaria x ananassa
FvH4_5g20290 Fragaria vesca
FvH4_5g21120 Fragaria vesca
Glyma.01G202100 Glycine max
Glyma.01G204800 Glycine max
Glyma.05G065100 Glycine max
Glyma.05G065200 Glycine max
Glyma.05G065300 Glycine max
Glyma.05G065700 Glycine max
Glyma.05G065800 Glycine max
Glyma.05G069100 Glycine max
Glyma.11G038300 Glycine max
Glyma.11G040700 Glycine max
Glyma.17G146900 Glycine max
Glyma.17G147200 Glycine max
Glyma.17G147400 Glycine max
Glyma.17G147500 Glycine max
Glyma.17G147600 Glycine max
Glyma.17G151700 Glycine max
Gohir.A03G003900 Gossypium hirsutum
Gohir.A08G159900 Gossypium hirsutum
Gohir.A08G163400 Gossypium hirsutum
Gohir.A08G163500 Gossypium hirsutum
Gohir.A08G164800 Gossypium hirsutum
Gohir.A12G211100 Gossypium hirsutum
Gohir.D03G168500 Gossypium hirsutum
Gohir.D08G180300 Gossypium hirsutum
Gohir.D08G183200 Gossypium hirsutum
Gohir.D08G183300 Gossypium hirsutum
Gohir.D08G183400 Gossypium hirsutum
Gohir.D12G213700 Gossypium hirsutum
Gorai.003G178400 Gossypium raimondii
Gorai.004G188800 Gossypium raimondii
Gorai.004G192300 Gossypium raimondii
Gorai.004G192400 Gossypium raimondii
Gorai.004G192500 Gossypium raimondii
Gorai.008G229300 Gossypium raimondii
GSVIVG01004469001 Vitis vinifera
GSVIVG01004595001 Vitis vinifera
GSVIVG01005915001 Vitis vinifera
GSVIVG01005917001 Vitis vinifera
GSVIVG01013208001 Vitis vinifera
HanXRQChr03g0074761 Helianthus annuus
HanXRQChr11g0332781 Helianthus annuus
HanXRQChr17g0535741 Helianthus annuus
Haze_07972 Corylus avellana
Haze_08306 Corylus avellana
Haze_08309 Corylus avellana
Hma1.2p1_0311F.1_g121250 Hydrangea macrophylla
Hma1.2p1_1008F.1_g247223 Hydrangea macrophylla
HPP92_014866 Vanilla planifolia
HPP92_017957 Vanilla planifolia
Hund11273 Selenicereus undatus
Hund14432 Selenicereus undatus
Hund14482 Selenicereus undatus
Lalb_Chr09g0323961 Lupinus albus
Lalb_Chr09g0329611 Lupinus albus
Lalb_Chr09g0329821 Lupinus albus
Lalb_Chr16g0379251 Lupinus albus
Lalb_Chr16g0379341 Lupinus albus
Lj2A247T89 Lonicera japonica
Lj2C228T13 Lonicera japonica
Lj2C229T8 Lonicera japonica
Lj2g0025909 Lotus japonicus
Lj4g0001993 Lotus japonicus
Lj4g0003200 Lotus japonicus
Lj4g0006140 Lotus japonicus
Lj4g0019106 Lotus japonicus
Lj4g0026729 Lotus japonicus
Lj6g0009910 Lotus japonicus
Lj8C276T11 Lonicera japonica
Lj8C289G1 Lonicera japonica
Lsat_1_v5_gn_6_60620 Lactuca sativa
Manes.01G087800 Manihot esculenta
Manes.02G044700 Manihot esculenta
Manes.17G018000 Manihot esculenta
Manes.17G018100 Manihot esculenta
MBI04_g13850_MAGBIO Magnolia biondii
MD04G1052600 Malus domestica
MD06G1041000 Malus domestica
MD06G1047600 Malus domestica
Medtr4g098930 Medicago truncatula
Medtr4g099370 Medicago truncatula
Medtr4g099400 Medicago truncatula
Medtr5g013440 Medicago truncatula
MELO3C003336.2 Cucumis melo
MELO3C003371.2 Cucumis melo
Migut.A00275 Erythranthe guttata
Migut.E00829 Erythranthe guttata
MSTRG.1951 Avicennia marina
MSTRG.25874 Avicennia marina
Nitab4.5_0000500g0190 Nicotiana tabacum
Nitab4.5_0000500g0210 Nicotiana tabacum
Nitab4.5_0000506g0110 Nicotiana tabacum
Nitab4.5_0002055g0020 Nicotiana tabacum
Nitab4.5_0003456g0090 Nicotiana tabacum
Nitab4.5_0003567g0040 Nicotiana tabacum
Nitab4.5_0003567g0050 Nicotiana tabacum
Nitab4.5_0005487g0010 Nicotiana tabacum
Nitab4.5_0009567g0010 Nicotiana tabacum
Nitab4.5_0010461g0020 Nicotiana tabacum
Nn1g00633 Nelumbo nucifera
Nn1g00774 Nelumbo nucifera
Nn6g33681 Nelumbo nucifera
Oeu028059.1 Olea europaea
Oeu032809.1 Olea europaea
Os07g0496250 Oryza sativa ssp. japonica
Peaxi162Scf00084g00716 Petunia axillaris
Peaxi162Scf00102g00734 Petunia axillaris
Peaxi162Scf00190g00719 Petunia axillaris
Peaxi162Scf00301g00015 Petunia axillaris
Peaxi162Scf00301g00028 Petunia axillaris
Peaxi162Scf00301g00029 Petunia axillaris
Peaxi162Scf00301g00112 Petunia axillaris
Peaxi162Scf00301g00113 Petunia axillaris
Peaxi162Scf00301g00312 Petunia axillaris
PGR042G0977 Punica granatum
PGR042G1092 Punica granatum
PGR042G3516 Punica granatum
PGSC0003DMG400001848 Solanum tuberosum
PGSC0003DMG400020497 Solanum tuberosum
PGSC0003DMG400026220 Solanum tuberosum
PGSC0003DMG400026221 Solanum tuberosum
PGSC0003DMG400026222 Solanum tuberosum
PGSC0003DMG400026590 Solanum tuberosum
Phvul.002G001700 Phaseolus vulgaris
Phvul.002G004100 Phaseolus vulgaris
Phvul.003G224600 Phaseolus vulgaris
Phvul.003G224700 Phaseolus vulgaris
Phvul.003G224800 Phaseolus vulgaris
Phvul.003G228000 Phaseolus vulgaris
Potri.001G147200 Populus trichocarpa
Potri.001G151500 Populus trichocarpa
Potri.003G083200 Populus trichocarpa
Potri.003G087000 Populus trichocarpa
Prupe.5G047300 Prunus persica
Prupe.5G057900 Prunus persica
Psat0s116g0200 Pisum sativum
Psat2g175880 Pisum sativum
Psat4g075480 Pisum sativum
Psat4g075560 Pisum sativum
PSO063G7308 Papaver somniferum
PSO478G3108 Papaver somniferum
PSO782G5317 Papaver somniferum
QL12p007247 Quercus lobata
QL12p008843 Quercus lobata
QL12p008869 Quercus lobata
QL12p008891 Quercus lobata
RcHm_v2.0_Chr7g0205401 Rosa chinensis
RcHm_v2.0_Chr7g0208241 Rosa chinensis
Rhsim01G0117000 Rhododendron simsii
Rhsim02G0108400 Rhododendron simsii
Rhsim02G0108900 Rhododendron simsii
Rhsim02G0109100 Rhododendron simsii
Rhsim02G0109400 Rhododendron simsii
Rhsim07G0121300 Rhododendron simsii
Rhsim07G0121500 Rhododendron simsii
Rhsim07G0121600 Rhododendron simsii
Rhsim11G0011000 Rhododendron simsii
RhsimUnG0093600 Rhododendron simsii
Sabra01G0115700 Salix brachista
Sabra03G0053900 Salix brachista
Sabra03G0056700 Salix brachista
SalBow1G0233 Salvia bowleyana
SalBow1G1513 Salvia bowleyana
SalBow1G1719 Salvia bowleyana
SalBow4G1351 Salvia bowleyana
Sc01g0008020 Simmondsia chinensis
Sc07g0009070 Simmondsia chinensis
Sc22g0001140 Simmondsia chinensis
Sc22g0001360 Simmondsia chinensis
Sed0009214 Sechium edule
Sed0015448 Sechium edule
Sed0025042 Sechium edule
SEGI_02344 Sequoiadendron giganteum
SEGI_06219 Sequoiadendron giganteum
SEGI_07222 Sequoiadendron giganteum
SEGI_10922 Sequoiadendron giganteum
SEGI_18138 Sequoiadendron giganteum
SEGI_19126 Sequoiadendron giganteum
SEGI_22058 Sequoiadendron giganteum
SEGI_31131 Sequoiadendron giganteum
SEGI_31312 Sequoiadendron giganteum
SEGI_32658 Sequoiadendron giganteum
SEGI_36846 Sequoiadendron giganteum
SEGI_39708 Sequoiadendron giganteum
SEGI_40210 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09253 Striga asiatica
SGA_v2.0_scaffold27G11489 Striga asiatica
Solyc06g060970.2 Solanum lycopersicum
Solyc08g007090.3 Solanum lycopersicum
Solyc08g077330.3 Solanum lycopersicum
Solyc08g077900.3 Solanum lycopersicum
Solyc08g077910.3 Solanum lycopersicum
Sopen06g021110 Solanum pennellii
Sopen08g003030 Solanum pennellii
Sopen08g025910 Solanum pennellii
Sopen08g026410 Solanum pennellii
Sopen08g026420 Solanum pennellii
Sopen08g026430 Solanum pennellii
Sp7g17160 Schrenkiella parvula
TAR629G0655 Trochodendron aralioides
TAR629G3350 Trochodendron aralioides
TAR636G0573 Trochodendron aralioides
TAR636G1947 Trochodendron aralioides
THA.LOC104807927 Tarenaya hassleriana
THA.LOC104809533 Tarenaya hassleriana
THA.LOC104809534 Tarenaya hassleriana
THA.LOC104820141 Tarenaya hassleriana
Thecc.03G234700 Theobroma cacao
Thecc.03G241800 Theobroma cacao
Thecc.03G242000 Theobroma cacao
Thhalv10026076m.g Eutrema salsugineum
TPR.G17126 Trifolium pratense
TPR.G17139 Trifolium pratense
TPR.G19182 Trifolium pratense
TPR.G25768 Trifolium pratense
TPR.G31424 Trifolium pratense
TPR.G82 Trifolium pratense
TWI15G0377 Tripterygium wilfordii
TWI60G0434 Tripterygium wilfordii
TWI60G1430 Tripterygium wilfordii
TWI81G1028 Tripterygium wilfordii
vmacro00353 Vaccinium macrocarpon
vmacro14144 Vaccinium macrocarpon
vmacro16233 Vaccinium macrocarpon
VMungo0251G0632 Vigna mungo
VMungo0251G1819 Vigna mungo
VMungo0647G1205 Vigna mungo
VMungo1215G1638 Vigna mungo

User provided reference genes

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