Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44810 Brassica napus
A09p00580 Brassica napus
A09p10270 Brassica napus
A10p15340 Brassica napus
Aa31LG1G11650 Aethionema arabicum
Aa31LG5G630 Aethionema arabicum
Aa31LG8G12120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3826 Anthoceros agrestis
Actinidia02829 Actinidia chinensis
Actinidia07327 Actinidia chinensis
Actinidia14190 Actinidia chinensis
Actinidia21940 Actinidia chinensis
Actinidia38838 Actinidia chinensis
Ah.05g180390 Amaranthus hybridus
Ah.09g224300 Amaranthus hybridus
Ah.14g079270 Amaranthus hybridus
Ah.15g100400 Amaranthus hybridus
AL139U10030 Arabidopsis lyrata
AL3G40430 Arabidopsis lyrata
AL3G44830 Arabidopsis lyrata
AL6G53160 Arabidopsis lyrata
AL8G35320 Arabidopsis lyrata
Aqoxy7G00259 Aquilegia oxysepala
Aqoxy7G03621 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2V0WQW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CC0NGP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LA756D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1T9B4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W4CT0I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2CNA9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YIG4PR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z11XNF Arachis hypogaea
AT2G11520 Arabidopsis thaliana
AT4G00330 Arabidopsis thaliana
AT5G58940 Arabidopsis thaliana
ATR0680G262 Amborella trichopoda
ATR0767G207 Amborella trichopoda
Atru.chr3.4065 Acer truncatum
Atru.chr5.525 Acer truncatum
Atru.chr7.1965 Acer truncatum
AUR62004386 Chenopodium quinoa
AUR62011195 Chenopodium quinoa
AUR62013293 Chenopodium quinoa
AUR62022592 Chenopodium quinoa
BcaB01g02240 Brassica carinata
BcaB02g11505 Brassica carinata
BcaB08g34518 Brassica carinata
BcaB08g36310 Brassica carinata
BcaC01g03140 Brassica carinata
BcaC04g23094 Brassica carinata
BcaC04g24183 Brassica carinata
BolC3t17844H Brassica oleracea
BolC9t52963H Brassica oleracea
BolC9t54114H Brassica oleracea
BolC9t57971H Brassica oleracea
BraA03t13616Z Brassica rapa
BraA09t36673Z Brassica rapa
BraA10t43699Z Brassica rapa
C03p55670 Brassica napus
C09p00280 Brassica napus
C09p12210 Brassica napus
C09p51110 Brassica napus
CAN.G1062.2 Capsicum annuum
CAN.G1504.1 Capsicum annuum
CANSAT11G1406 Cannabis sativa
CANSAT54G2213 Cannabis sativa
CANSAT56G0884 Cannabis sativa
CARHR104950 Cardamine hirsuta
CARHR248410 Cardamine hirsuta
CARHR272880 Cardamine hirsuta
Carub.0003s2770 Capsella rubella
Carub.0006s3692 Capsella rubella
Carub.0008s1958 Capsella rubella
Ca_05575_v3 Cicer arietinum L.
Ca_21661_v3 Cicer arietinum L.
Ca_23606_v3 Cicer arietinum L.
Cc01_g13770 Coffea canephora
Cc02_g38290 Coffea canephora
Cc06_g07900 Coffea canephora
CDE04G0623 Ceratophyllum demersum
CDE06G0446 Ceratophyllum demersum
CDE06G1825 Ceratophyllum demersum
CDE08G0064 Ceratophyllum demersum
Cfa002291 Carpinus fangiana
Cfa003898 Carpinus fangiana
Cfa011638 Carpinus fangiana
Ciclev10008662m.g Citrus clementina
Ciclev10023685m.g Citrus clementina
Ciclev10028389m.g Citrus clementina
CiPaw.02G032900 Carya illinoinensis
CiPaw.03G249700 Carya illinoinensis
CiPaw.04G176100 Carya illinoinensis
CiPaw.13G082400 Carya illinoinensis
ClCG02G019740 Citrullus lanatus
ClCG05G001410 Citrullus lanatus
ClCG06G011630 Citrullus lanatus
COL.COLO4_12735 Corchorus olitorius
COL.COLO4_15567 Corchorus olitorius
COL.COLO4_19092 Corchorus olitorius
Cpa.g.c33874 Carica papaya
Cpa.g.sc11.32 Carica papaya
Cpa.g.sc112.63 Carica papaya
Cpa.g.sc46.54 Carica papaya
CsaV3_1G027920 Cucumis sativus L.
CsaV3_3G008800 Cucumis sativus L.
CsaV3_6G016440 Cucumis sativus L.
CSS0015295 Camellia sinensis var. sinensis
CSS0029097 Camellia sinensis var. sinensis
CSS0030995 Camellia sinensis var. sinensis
CSS0038535 Camellia sinensis var. sinensis
DCAR_005901 Daucus carota
DCAR_006940 Daucus carota
DCAR_007398 Daucus carota
DCAR_008616 Daucus carota
DCAR_009329 Daucus carota
DCAR_017775 Daucus carota
Dinv28604 Davidia involucrata
Dinv36468 Davidia involucrata
Dinv36470 Davidia involucrata
Duzib138G1615 Durio zibethinus
Duzib150G0828 Durio zibethinus
Duzib150G1053 Durio zibethinus
Duzib168G0103 Durio zibethinus
Duzib168G0903 Durio zibethinus
Duzib187G0922 Durio zibethinus
ECA234G1439 Erigeron canadensis
ECA234G4719 Erigeron canadensis
ECA240G0278 Erigeron canadensis
ECA240G3078 Erigeron canadensis
EL10Ac1g00391 Beta vulgaris
EL10Ac7g16114 Beta vulgaris
EL10Ac8g18750 Beta vulgaris
Eucgr.C04322 Eucalyptus grandis
Eucgr.E00114 Eucalyptus grandis
Eucgr.E03523 Eucalyptus grandis
Eucgr.J01946 Eucalyptus grandis
FAN01G2233 Fragaria x ananassa
FAN03G0305 Fragaria x ananassa
FAN06G0595 Fragaria x ananassa
FAN06G0627 Fragaria x ananassa
FAN06G4733 Fragaria x ananassa
FAN10G0848 Fragaria x ananassa
FAN10G1354 Fragaria x ananassa
FAN19G0477 Fragaria x ananassa
FAN23G1148 Fragaria x ananassa
FAN23G3037 Fragaria x ananassa
FAN26G2277 Fragaria x ananassa
FAN28G2082 Fragaria x ananassa
FvH4_1g02470 Fragaria vesca
FvH4_3g37911 Fragaria vesca
FvH4_7g14830 Fragaria vesca
FvH4_7g14840 Fragaria vesca
Glyma.07G068750 Glycine max
Glyma.11G178300 Glycine max
Glyma.13G161700 Glycine max
Glyma.14G190700 Glycine max
Glyma.16G034626 Glycine max
Glyma.17G109600 Glycine max
Glyma.18G064100 Glycine max
Gohir.A05G014000 Gossypium hirsutum
Gohir.A06G053100 Gossypium hirsutum
Gohir.A07G102700 Gossypium hirsutum
Gohir.A07G141500 Gossypium hirsutum
Gohir.A08G237900 Gossypium hirsutum
Gohir.A11G090350 Gossypium hirsutum
Gohir.D05G015100 Gossypium hirsutum
Gohir.D06G052100 Gossypium hirsutum
Gohir.D07G106700 Gossypium hirsutum
Gohir.D08G258300 Gossypium hirsutum
Gohir.D11G094850 Gossypium hirsutum
Gorai.001G114800 Gossypium raimondii
Gorai.004G275500 Gossypium raimondii
Gorai.007G101300 Gossypium raimondii
Gorai.009G015200 Gossypium raimondii
Gorai.010G060400 Gossypium raimondii
GSVIVG01012827001 Vitis vinifera
GSVIVG01024803001 Vitis vinifera
GSVIVG01027001001 Vitis vinifera
HanXRQChr03g0063171 Helianthus annuus
HanXRQChr03g0063391 Helianthus annuus
HanXRQChr03g0063401 Helianthus annuus
HanXRQChr08g0237111 Helianthus annuus
HanXRQChr10g0314461 Helianthus annuus
HanXRQChr12g0356841 Helianthus annuus
HanXRQChr16g0509491 Helianthus annuus
HanXRQChr16g0522321 Helianthus annuus
HanXRQChr17g0562381 Helianthus annuus
Haze_15534 Corylus avellana
Haze_24244 Corylus avellana
Haze_25478 Corylus avellana
Hma1.2p1_0071F.1_g037740 Hydrangea macrophylla
Hma1.2p1_0343F.1_g130870 Hydrangea macrophylla
Hma1.2p1_0497F.1_g166490 Hydrangea macrophylla
Hma1.2p1_0543F.1_g175230 Hydrangea macrophylla
Hma1.2p1_3368F.1_g335630 Hydrangea macrophylla
HPP92_021719 Vanilla planifolia
HPP92_022032 Vanilla planifolia
HPP92_022066 Vanilla planifolia
Hund09294 Selenicereus undatus
Hund16659 Selenicereus undatus
Hund21572 Selenicereus undatus
Lalb_Chr04g0252411 Lupinus albus
Lalb_Chr07g0179321 Lupinus albus
Lalb_Chr10g0103181 Lupinus albus
Lalb_Chr15g0082631 Lupinus albus
Lalb_Chr17g0339431 Lupinus albus
Lalb_Chr18g0050631 Lupinus albus
Lj1A143G38 Lonicera japonica
Lj3g0012033 Lotus japonicus
Lj4g0013035 Lotus japonicus
Lj6g0012730 Lotus japonicus
Lj7A436G59 Lonicera japonica
Lj9A585T58 Lonicera japonica
LjContig00155g0000587 Lotus japonicus
Lsat_1_v5_gn_4_182720 Lactuca sativa
Lsat_1_v5_gn_4_34681 Lactuca sativa
Lsat_1_v5_gn_4_42600 Lactuca sativa
Lsat_1_v5_gn_5_53841 Lactuca sativa
Lsat_1_v5_gn_5_93661 Lactuca sativa
Lsat_1_v5_gn_6_3141 Lactuca sativa
Lsat_1_v5_gn_7_44381 Lactuca sativa
Lsat_1_v5_gn_8_155401 Lactuca sativa
Lsat_1_v5_gn_9_25601 Lactuca sativa
Manes.01G254900 Manihot esculenta
Manes.05G032100 Manihot esculenta
Manes.14G117100 Manihot esculenta
Manes.17G018300 Manihot esculenta
Mapoly0007s0160 Marchantia polymorpha
MBI15_g16752_MAGBIO Magnolia biondii
MBI18_g32045_MAGBIO Magnolia biondii
MD01G1066900 Malus domestica
MD02G1021700 Malus domestica
MD02G1022200 Malus domestica
MD03G1077700 Malus domestica
MD06G1116500 Malus domestica
MD07G1133900 Malus domestica
MD11G1082100 Malus domestica
MD15G1164700 Malus domestica
Medtr3g462390 Medicago truncatula
Medtr4g115630 Medicago truncatula
Medtr5g069600 Medicago truncatula
Medtr8g028880 Medicago truncatula
MELO3C010298.2 Cucumis melo
MELO3C025875.2 Cucumis melo
MELO3C031604.2 Cucumis melo
Migut.B01777 Erythranthe guttata
Migut.K00418 Erythranthe guttata
Migut.N00815 Erythranthe guttata
Migut.O00791 Erythranthe guttata
MSTRG.17284 Avicennia marina
MSTRG.26347 Avicennia marina
Nitab4.5_0000200g0230 Nicotiana tabacum
Nitab4.5_0000374g0040 Nicotiana tabacum
Nitab4.5_0001549g0010 Nicotiana tabacum
Nitab4.5_0011105g0010 Nicotiana tabacum
Nn2g11361 Nelumbo nucifera
Nn2g12139 Nelumbo nucifera
Nn6g33352 Nelumbo nucifera
Nn8g39577 Nelumbo nucifera
Oeu000518.1 Olea europaea
Oeu002420.1 Olea europaea
Oeu010623.1 Olea europaea
Oeu019395.1 Olea europaea
Oeu019404.1 Olea europaea
Oeu052180.1 Olea europaea
Oeu052753.1 Olea europaea
Oeu055958.1 Olea europaea
Os02g0821400 Oryza sativa ssp. japonica
Os03g0148700 Oryza sativa ssp. japonica
Os03g0825800 Oryza sativa ssp. japonica
Os09g0123300 Oryza sativa ssp. japonica
Peaxi162Scf00008g02716 Petunia axillaris
Peaxi162Scf00088g01117 Petunia axillaris
PGR042G2282 Punica granatum
PGR083G1447 Punica granatum
PGR091G0002 Punica granatum
PGR102G2728 Punica granatum
PGR119G2336 Punica granatum
PGSC0003DMG400027940 Solanum tuberosum
PGSC0003DMG402018444 Solanum tuberosum
PGSC0003DMG402019416 Solanum tuberosum
Phvul.003G170200 Phaseolus vulgaris
Phvul.006G066500 Phaseolus vulgaris
Phvul.006G066611 Phaseolus vulgaris
Phvul.008G263900 Phaseolus vulgaris
Phvul.010G100700 Phaseolus vulgaris
Phvul.L001761 Phaseolus vulgaris
Potri.002G161600 Populus trichocarpa
Potri.006G064200 Populus trichocarpa
Potri.009G041900 Populus trichocarpa
Potri.014G087200 Populus trichocarpa
Potri.018G124600 Populus trichocarpa
Pp3c13_12310 Physcomitrium patens
Pp3c19_20890 Physcomitrium patens
Pp3c20_14660 Physcomitrium patens
Pp3c22_9330 Physcomitrium patens
Pp3c23_14970 Physcomitrium patens
Pp3c3_11260 Physcomitrium patens
Pp3c4_19890 Physcomitrium patens
Prupe.6G062500 Prunus persica
Prupe.7G250000 Prunus persica
Psat2g060280 Pisum sativum
Psat4g035960 Pisum sativum
Psat4g213040 Pisum sativum
Psat5g161440 Pisum sativum
PSO063G1030 Papaver somniferum
PSO170G6621 Papaver somniferum
PSO210G2809 Papaver somniferum
PSO210G5474 Papaver somniferum
PSO478G0726 Papaver somniferum
PSO782G3338 Papaver somniferum
QL01p027246 Quercus lobata
QL02p090175 Quercus lobata
QL04p054115 Quercus lobata
QL04p075499 Quercus lobata
RcHm_v2.0_Chr1g0356791 Rosa chinensis
RcHm_v2.0_Chr2g0087441 Rosa chinensis
RcHm_v2.0_Chr5g0068331 Rosa chinensis
Rhsim01G0060300 Rhododendron simsii
Rhsim01G0146900 Rhododendron simsii
Rhsim01G0234600 Rhododendron simsii
Sabra02G0128500 Salix brachista
Sabra06G0046900 Salix brachista
Sabra09G0029500 Salix brachista
Sabra14G0063200 Salix brachista
Sabra18G0106000 Salix brachista
SalBow1G2200 Salvia bowleyana
SalBow3G2015 Salvia bowleyana
Sc01g0003520 Simmondsia chinensis
Sc18g0000260 Simmondsia chinensis
Sc21g0006180 Simmondsia chinensis
Sed0002410 Sechium edule
Sed0011966 Sechium edule
Sed0021003 Sechium edule
Sed0023441 Sechium edule
Sed0027934 Sechium edule
SEGI_33196 Sequoiadendron giganteum
SEGI_39437 Sequoiadendron giganteum
SGA_v2.0_scaffold63G21802 Striga asiatica
SGA_v2.0_scaffold95G28825 Striga asiatica
SMO134G0038 Selaginella moellendorffii
SMO143G0063 Selaginella moellendorffii
SMO364G0232 Selaginella moellendorffii
Solyc03g078470.3 Solanum lycopersicum
Solyc07g007780.3 Solanum lycopersicum
Solyc10g012170.3 Solanum lycopersicum
Sopen03g021350 Solanum pennellii
Sopen07g001070 Solanum pennellii
Sopen10g005930 Solanum pennellii
Sp3g26330 Schrenkiella parvula
Sp6g00390 Schrenkiella parvula
Sp6g20640 Schrenkiella parvula
TAR623G0364 Trochodendron aralioides
TAR625G1015 Trochodendron aralioides
TAR626G1875 Trochodendron aralioides
TAR629G2820 Trochodendron aralioides
TAR636G0444 Trochodendron aralioides
TAR636G1407 Trochodendron aralioides
TAR636G1556 Trochodendron aralioides
THA.LOC104801401 Tarenaya hassleriana
THA.LOC104808959 Tarenaya hassleriana
THA.LOC104811272 Tarenaya hassleriana
THA.LOC104811273 Tarenaya hassleriana
THA.LOC104825849 Tarenaya hassleriana
THA.LOC104826557 Tarenaya hassleriana
Thecc.01G356400 Theobroma cacao
Thecc.09G134400 Theobroma cacao
Thecc.09G307000 Theobroma cacao
Thhalv10013432m.g Eutrema salsugineum
Thhalv10022650m.g Eutrema salsugineum
Thhalv10028705m.g Eutrema salsugineum
TPR.G17922 Trifolium pratense
TPR.G24043 Trifolium pratense
TPR.G27826 Trifolium pratense
TPR.G30111 Trifolium pratense
TPR.G31164 Trifolium pratense
TPR.G7620 Trifolium pratense
TWI23G0014 Tripterygium wilfordii
TWI63G0329 Tripterygium wilfordii
TWI79G1538 Tripterygium wilfordii
vmacro07732 Vaccinium macrocarpon
vmacro14576 Vaccinium macrocarpon
vmacro20917 Vaccinium macrocarpon
VMungo0331G1289 Vigna mungo
VMungo0540G0807 Vigna mungo
VMungo1215G2068 Vigna mungo
Zm00001eb003890 Zea mays
Zm00001eb025560 Zea mays
Zm00001eb078090 Zea mays
Zm00001eb147770 Zea mays
Zm00001eb191110 Zea mays
Zm00001eb211440 Zea mays
Zm00001eb426060 Zea mays

User provided reference genes

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