Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p04460 Brassica napus
A03p24820 Brassica napus
A03p65830 Brassica napus
A04p33410 Brassica napus
A05p04760 Brassica napus
A09p08900 Brassica napus
A09p57670 Brassica napus
A10p27310 Brassica napus
Aa31LG1G26160 Aethionema arabicum
Aa31LG3G16890 Aethionema arabicum
Aa31LG6G15370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3851 Anthoceros agrestis
Actinidia21609 Actinidia chinensis
Actinidia28234 Actinidia chinensis
Actinidia28862 Actinidia chinensis
Actinidia30954 Actinidia chinensis
Ah.03g143570 Amaranthus hybridus
Ah.03g143580 Amaranthus hybridus
Ah.12g053710 Amaranthus hybridus
AL4G11780 Arabidopsis lyrata
AL4G43650 Arabidopsis lyrata
AL6G20760 Arabidopsis lyrata
AL7G12130 Arabidopsis lyrata
AL8G42490 Arabidopsis lyrata
Aqoxy3G02547 Aquilegia oxysepala
Aqoxy6G00793 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AH9PNT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FKQ7LK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GZ9H4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JPR404 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0SWX9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZ3VA1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SLY8CF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T4ETEL Arachis hypogaea
AT2G22290 Arabidopsis thaliana
AT2G44610 Arabidopsis thaliana
AT4G39890 Arabidopsis thaliana
AT5G10260 Arabidopsis thaliana
AT5G64990 Arabidopsis thaliana
ATR0665G221 Amborella trichopoda
ATR0782G210 Amborella trichopoda
Atru.chr4.61 Acer truncatum
Atru.chr5.40 Acer truncatum
Atru.chr5.70 Acer truncatum
Atru.chr6.1789 Acer truncatum
AUR62003796 Chenopodium quinoa
AUR62007214 Chenopodium quinoa
AUR62018787 Chenopodium quinoa
BcaB01g03305 Brassica carinata
BcaB01g05543 Brassica carinata
BcaB02g08837 Brassica carinata
BcaB04g20001 Brassica carinata
BcaB08g35055 Brassica carinata
BcaB08g37123 Brassica carinata
BcaC02g07103 Brassica carinata
BcaC02g12290 Brassica carinata
BcaC04g19318 Brassica carinata
BcaC04g23273 Brassica carinata
BcaC07g41083 Brassica carinata
BcaNung02301 Brassica carinata
BcaNung03405 Brassica carinata
BolC3t13026H Brassica oleracea
BolC3t15309H Brassica oleracea
BolC4t22187H Brassica oleracea
BolC4t28615H Brassica oleracea
BolC7t46694H Brassica oleracea
BolC8t51653H Brassica oleracea
BolC9t53932H Brassica oleracea
BolC9t59487H Brassica oleracea
BraA03t09791Z Brassica rapa
BraA03t11689Z Brassica rapa
BraA03t15635Z Brassica rapa
BraA04t18802Z Brassica rapa
BraA05t19452Z Brassica rapa
BraA09t36541Z Brassica rapa
BraA09t41160Z Brassica rapa
BraA10t44782Z Brassica rapa
C03p04950 Brassica napus
C03p29600 Brassica napus
C04p05570 Brassica napus
C04p71120 Brassica napus
C07p62800 Brassica napus
C08p40870 Brassica napus
C09p10320 Brassica napus
C09p67160 Brassica napus
CAN.G151.28 Capsicum annuum
CAN.G756.14 Capsicum annuum
CANSAT01G2078 Cannabis sativa
CANSAT21G0956 Cannabis sativa
CANSAT25G1935 Cannabis sativa
CARHR113510 Cardamine hirsuta
CARHR139830 Cardamine hirsuta
CARHR203040 Cardamine hirsuta
CARHR246810 Cardamine hirsuta
CARHR293780 Cardamine hirsuta
Carub.0004s0143 Capsella rubella
Carub.0004s2716 Capsella rubella
Carub.0006s0872 Capsella rubella
Carub.0007s0182 Capsella rubella
Carub.0008s2582 Capsella rubella
Carub.0008s2583 Capsella rubella
Ca_16523_v3 Cicer arietinum L.
Ca_17739_v3 Cicer arietinum L.
Ca_22039_v3 Cicer arietinum L.
Ca_24628_v3 Cicer arietinum L.
CBR_g38384 Chara braunii
Cc02_g25670 Coffea canephora
Cc07_g15170 Coffea canephora
CDE04G2688 Ceratophyllum demersum
CDE10G0154 Ceratophyllum demersum
CDE10G0921 Ceratophyllum demersum
CDE10G1245 Ceratophyllum demersum
CDE12G0195 Ceratophyllum demersum
Cfa002657 Carpinus fangiana
Cfa011020 Carpinus fangiana
Cfa012370 Carpinus fangiana
Cfa025691 Carpinus fangiana
Ciclev10022269m.g Citrus clementina
Ciclev10026499m.g Citrus clementina
Ciclev10032757m.g Citrus clementina
CiPaw.03G142100 Carya illinoinensis
CiPaw.04G099700 Carya illinoinensis
CiPaw.12G059500 Carya illinoinensis
CiPaw.12G059600 Carya illinoinensis
CiPaw.14G016500 Carya illinoinensis
ClCG09G012400 Citrullus lanatus
COL.COLO4_12349 Corchorus olitorius
Cpa.g.sc230.2 Carica papaya
Cpa.g.sc52.66 Carica papaya
Cre01.g047550 Chlamydomonas reinhardtii
CsaV3_3G049570 Cucumis sativus L.
CsaV3_6G045420 Cucumis sativus L.
CSS0002697 Camellia sinensis var. sinensis
CSS0032584 Camellia sinensis var. sinensis
CSS0037085 Camellia sinensis var. sinensis
DCAR_010088 Daucus carota
DCAR_014223 Daucus carota
DCAR_015778 Daucus carota
DCAR_025022 Daucus carota
Dinv13191 Davidia involucrata
Dinv21905 Davidia involucrata
Dinv25176 Davidia involucrata
Dinv28908 Davidia involucrata
Dinv43586 Davidia involucrata
Dinv44018 Davidia involucrata
Duzib133G0248 Durio zibethinus
Duzib138G0388 Durio zibethinus
Duzib187G0083 Durio zibethinus
Duzib264G0726 Durio zibethinus
Duzib268G1421 Durio zibethinus
ECA232G0540 Erigeron canadensis
ECA238G4508 Erigeron canadensis
ECA246G1841 Erigeron canadensis
EL10Ac6g15109 Beta vulgaris
EL10As14g24067 Beta vulgaris
Eucgr.D01171 Eucalyptus grandis
Eucgr.H04781 Eucalyptus grandis
FAN01G2946 Fragaria x ananassa
FAN03G0489 Fragaria x ananassa
FAN03G0949 Fragaria x ananassa
FAN03G2062 Fragaria x ananassa
FAN04G2565 Fragaria x ananassa
FAN08G3012 Fragaria x ananassa
FAN10G0329 Fragaria x ananassa
FAN13G2911 Fragaria x ananassa
FAN18G3987 Fragaria x ananassa
FAN19G2274 Fragaria x ananassa
FAN26G0553 Fragaria x ananassa
FAN28G2182 Fragaria x ananassa
FvH4_1g20860 Fragaria vesca
FvH4_5g21020 Fragaria vesca
FvH4_7g08750 Fragaria vesca
Glyma.01G202400 Glycine max
Glyma.01G202500 Glycine max
Glyma.05G068900 Glycine max
Glyma.05G178300 Glycine max
Glyma.08G135400 Glycine max
Glyma.11G040400 Glycine max
Glyma.11G040451 Glycine max
Glyma.11G240300 Glycine max
Glyma.17G151600 Glycine max
Glyma.18G017000 Glycine max
Gohir.A08G028500 Gossypium hirsutum
Gohir.A08G056000 Gossypium hirsutum
Gohir.A11G052100 Gossypium hirsutum
Gohir.A11G074000 Gossypium hirsutum
Gohir.A11G201200 Gossypium hirsutum
Gohir.A12G086900 Gossypium hirsutum
Gohir.A12G099300 Gossypium hirsutum
Gohir.D08G039200 Gossypium hirsutum
Gohir.D08G039250 Gossypium hirsutum
Gohir.D08G065300 Gossypium hirsutum
Gohir.D11G055500 Gossypium hirsutum
Gohir.D11G078701 Gossypium hirsutum
Gohir.D11G221500 Gossypium hirsutum
Gohir.D12G083100 Gossypium hirsutum
Gohir.D12G102300 Gossypium hirsutum
Gorai.004G037900 Gossypium raimondii
Gorai.004G067600 Gossypium raimondii
Gorai.007G060700 Gossypium raimondii
Gorai.007G084200 Gossypium raimondii
Gorai.007G238500 Gossypium raimondii
Gorai.008G090100 Gossypium raimondii
Gorai.008G111500 Gossypium raimondii
GSVIVG01002273001 Vitis vinifera
GSVIVG01013213001 Vitis vinifera
GSVIVG01013222001 Vitis vinifera
GSVIVG01018361001 Vitis vinifera
HanXRQChr01g0017521 Helianthus annuus
HanXRQChr06g0167221 Helianthus annuus
HanXRQChr09g0254751 Helianthus annuus
HanXRQChr09g0255031 Helianthus annuus
HanXRQChr10g0305371 Helianthus annuus
HanXRQChr15g0471631 Helianthus annuus
Haze_02905 Corylus avellana
Haze_02908 Corylus avellana
Haze_08313 Corylus avellana
Haze_24927 Corylus avellana
Haze_27648 Corylus avellana
Hma1.2p1_0021F.1_g014250 Hydrangea macrophylla
Hma1.2p1_0308F.1_g120210 Hydrangea macrophylla
Hma1.2p1_1254F.1_g270530 Hydrangea macrophylla
HPP92_003325 Vanilla planifolia
HPP92_009244 Vanilla planifolia
HPP92_027249 Vanilla planifolia
Hund11289 Selenicereus undatus
Hund13623 Selenicereus undatus
Hund14436 Selenicereus undatus
Hund16288 Selenicereus undatus
Hund28215 Selenicereus undatus
Hund28217 Selenicereus undatus
Lalb_Chr05g0220691 Lupinus albus
Lalb_Chr08g0231021 Lupinus albus
Lalb_Chr08g0231041 Lupinus albus
Lalb_Chr09g0323971 Lupinus albus
Lalb_Chr11g0075391 Lupinus albus
Lalb_Chr12g0203851 Lupinus albus
Lalb_Chr13g0295961 Lupinus albus
Lalb_Chr16g0379261 Lupinus albus
Lj2A549T37 Lonicera japonica
Lj4g0017945 Lotus japonicus
Lj4g0022684 Lotus japonicus
Lj8A722G15 Lonicera japonica
Lj9A549G49 Lonicera japonica
Lsat_1_v5_gn_0_5121 Lactuca sativa
Lsat_1_v5_gn_3_16060 Lactuca sativa
Lsat_1_v5_gn_4_141241 Lactuca sativa
Lsat_1_v5_gn_5_30641 Lactuca sativa
Lsat_1_v5_gn_5_48640 Lactuca sativa
Manes.05G058800 Manihot esculenta
Manes.12G134600 Manihot esculenta
Manes.13G075500 Manihot esculenta
Manes.17G021600 Manihot esculenta
Mapoly0141s0004 Marchantia polymorpha
MBI02_g08717_MAGBIO Magnolia biondii
MBI02_g25460_MAGBIO Magnolia biondii
MBI05_g19350_MAGBIO Magnolia biondii
MCO11G699 Micromonas commoda
MCO11G700 Micromonas commoda
MD01G1030600 Malus domestica
MD02G1225400 Malus domestica
MD07G1088300 Malus domestica
MD15G1323700 Malus domestica
Medtr3g087160 Medicago truncatula
Medtr4g098950 Medicago truncatula
Medtr5g013900 Medicago truncatula
Medtr8g090215 Medicago truncatula
MELO3C003369.2 Cucumis melo
MELO3C007755.2 Cucumis melo
Migut.B01484 Erythranthe guttata
Migut.H02358 Erythranthe guttata
Migut.L00123 Erythranthe guttata
Migut.N01713 Erythranthe guttata
Migut.O00569 Erythranthe guttata
MSTRG.15712 Avicennia marina
MSTRG.17103 Avicennia marina
MSTRG.23344 Avicennia marina
MSTRG.28133 Avicennia marina
MSTRG.3779 Avicennia marina
MSTRG.4963 Avicennia marina
Nitab4.5_0000004g0330 Nicotiana tabacum
Nitab4.5_0000204g0070 Nicotiana tabacum
Nitab4.5_0000735g0010 Nicotiana tabacum
Nitab4.5_0000735g0020 Nicotiana tabacum
Nitab4.5_0004088g0030 Nicotiana tabacum
Nitab4.5_0005034g0030 Nicotiana tabacum
Nitab4.5_0009581g0020 Nicotiana tabacum
Nitab4.5_0013002g0010 Nicotiana tabacum
Nn1g05349 Nelumbo nucifera
Nn5g30119 Nelumbo nucifera
Nn6g33689 Nelumbo nucifera
Oeu001790.1 Olea europaea
Oeu029043.1 Olea europaea
Oeu029044.1 Olea europaea
Oeu034861.1 Olea europaea
Oeu051806.1 Olea europaea
Os03g0191400 Oryza sativa ssp. japonica
Os07g0496000 Oryza sativa ssp. japonica
Peaxi162Scf00103g01615 Petunia axillaris
Peaxi162Scf00103g01617 Petunia axillaris
Peaxi162Scf00295g01123 Petunia axillaris
Peaxi162Scf00611g00020 Petunia axillaris
Peaxi162Scf00745g00017 Petunia axillaris
PGR031G1470 Punica granatum
PGR102G2394 Punica granatum
PGSC0003DMG400001716 Solanum tuberosum
PGSC0003DMG400007223 Solanum tuberosum
PGSC0003DMG400021796 Solanum tuberosum
Phvul.002G003500 Phaseolus vulgaris
Phvul.002G003800 Phaseolus vulgaris
Phvul.002G256300 Phaseolus vulgaris
Phvul.003G227800 Phaseolus vulgaris
Potri.001G147900 Populus trichocarpa
Potri.002G135500 Populus trichocarpa
Potri.003G086700 Populus trichocarpa
Potri.005G075300 Populus trichocarpa
Pp3c11_1230 Physcomitrium patens
Pp3c1_2270 Physcomitrium patens
Pp3c21_9230 Physcomitrium patens
Pp3c22_7010 Physcomitrium patens
Pp3c2_30870 Physcomitrium patens
Pp3c3_25940 Physcomitrium patens
Pp3c7_22860 Physcomitrium patens
PRCOL_00003658 Prasinoderma coloniale
Prupe.2G115200 Prunus persica
Prupe.5G048400 Prunus persica
Prupe.6G187300 Prunus persica
Psat0s116g0280 Pisum sativum
Psat5g090200 Pisum sativum
Psat7g054600 Pisum sativum
PSO063G5957 Papaver somniferum
PSO541G5288 Papaver somniferum
PSO781G0042 Papaver somniferum
PSO782G3404 Papaver somniferum
QL04p026053 Quercus lobata
QL04p026709 Quercus lobata
QL06p049496 Quercus lobata
QL12p007338 Quercus lobata
RcHm_v2.0_Chr1g0343981 Rosa chinensis
RcHm_v2.0_Chr2g0113471 Rosa chinensis
RcHm_v2.0_Chr7g0208031 Rosa chinensis
Rhsim07G0039400 Rhododendron simsii
Rhsim08G0010700 Rhododendron simsii
Sabra01G0116200 Salix brachista
Sabra01G0117500 Salix brachista
Sabra02G0105300 Salix brachista
Sabra03G0056400 Salix brachista
Sabra05G0061900 Salix brachista
SalBow3G0368 Salvia bowleyana
SalBow4G2552 Salvia bowleyana
SalBow5G1001 Salvia bowleyana
SalBow5G2548 Salvia bowleyana
SalBow5G4301 Salvia bowleyana
Sc07g0008900 Simmondsia chinensis
Sc16g0005000 Simmondsia chinensis
Sc22g0001330 Simmondsia chinensis
Sed0009875 Sechium edule
Sed0017876 Sechium edule
Sed0021983 Sechium edule
SEGI_38456 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31514 Striga asiatica
SGA_v2.0_scaffold47G17787 Striga asiatica
SGA_v2.0_scaffold52G19270 Striga asiatica
SGA_v2.0_scaffold77G25251 Striga asiatica
SGA_v2.0_scaffold95G28724 Striga asiatica
SHI11796 Sapria himalayana
SHI17012 Sapria himalayana
SHI23776 Sapria himalayana
SHI47342 Sapria himalayana
SMO119G0311 Selaginella moellendorffii
Solyc01g088560.3 Solanum lycopersicum
Solyc03g078570.3 Solanum lycopersicum
Solyc05g051570.3 Solanum lycopersicum
Sopen01g035420 Solanum pennellii
Sopen03g021480 Solanum pennellii
Sopen05g030020 Solanum pennellii
Sp2g28070 Schrenkiella parvula
Sp4g01330 Schrenkiella parvula
Sp4g26700 Schrenkiella parvula
Sp7g36000 Schrenkiella parvula
TAR374G0824 Trochodendron aralioides
TAR375G0396 Trochodendron aralioides
TAR381G0269 Trochodendron aralioides
TAR381G1171 Trochodendron aralioides
THA.LOC104798965 Tarenaya hassleriana
THA.LOC104802508 Tarenaya hassleriana
THA.LOC104807693 Tarenaya hassleriana
THA.LOC104808489 Tarenaya hassleriana
THA.LOC104817175 Tarenaya hassleriana
THA.LOC104819297 Tarenaya hassleriana
THA.LOC104827583 Tarenaya hassleriana
Thecc.01G101200 Theobroma cacao
Thecc.01G402800 Theobroma cacao
Thhalv10000663m.g Eutrema salsugineum
Thhalv10001633m.g Eutrema salsugineum
Thhalv10005261m.g Eutrema salsugineum
Thhalv10014689m.g Eutrema salsugineum
Thhalv10026225m.g Eutrema salsugineum
TPR.G17836 Trifolium pratense
TPR.G19188 Trifolium pratense
TPR.G22714 Trifolium pratense
TPR.G23030 Trifolium pratense
TPR.G6220 Trifolium pratense
TPR.G7713 Trifolium pratense
TWI14G1435 Tripterygium wilfordii
TWI59G1403 Tripterygium wilfordii
TWI74G0308 Tripterygium wilfordii
unitig_26.g8862 Utricularia gibba
unitig_27.g25356 Utricularia gibba
unitig_28.g29439 Utricularia gibba
unitig_699.g19583 Utricularia gibba
unitig_750.g28403 Utricularia gibba
unitig_88.g27722 Utricularia gibba
vmacro13532 Vaccinium macrocarpon
vmacro18599 Vaccinium macrocarpon
vmacro21089 Vaccinium macrocarpon
VMungo0251G0346 Vigna mungo
VMungo0251G3025 Vigna mungo
VMungo0331G2026 Vigna mungo
VMungo1215G0434 Vigna mungo
Zm00001eb006940 Zea mays
Zm00001eb105510 Zea mays
Zm00001eb109670 Zea mays
Zm00001eb321990 Zea mays

User provided reference genes

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