Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18010 Brassica napus
A03p18300 Brassica napus
A04p22000 Brassica napus
A04p24640 Brassica napus
A05p12860 Brassica napus
A05p13540 Brassica napus
A07p00350 Brassica napus
A07p19450 Brassica napus
A08p10200 Brassica napus
A09p12870 Brassica napus
Aa31LG5G4400 Aethionema arabicum
Aa31LG5G5020 Aethionema arabicum
Aa31LG5G7200 Aethionema arabicum
Aa31LG8G17360 Aethionema arabicum
Aa31LG9G3340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2616 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2617 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4460 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.865 Anthoceros agrestis
Actinidia07027 Actinidia chinensis
Actinidia09510 Actinidia chinensis
Actinidia30122 Actinidia chinensis
Actinidia32960 Actinidia chinensis
Actinidia35922 Actinidia chinensis
Actinidia37196 Actinidia chinensis
Actinidia37555 Actinidia chinensis
Actinidia37556 Actinidia chinensis
Ah.04g149700 Amaranthus hybridus
Ah.08g213630 Amaranthus hybridus
Ah.08g219630 Amaranthus hybridus
Ah.13g077670 Amaranthus hybridus
Ah.15g092640 Amaranthus hybridus
Ah.15g097540 Amaranthus hybridus
AL146U10010 Arabidopsis lyrata
AL3G53340 Arabidopsis lyrata
AL4G23600 Arabidopsis lyrata
AL4G27340 Arabidopsis lyrata
AL4G28180 Arabidopsis lyrata
AL4G28190 Arabidopsis lyrata
AL7G42470 Arabidopsis lyrata
Aqoxy2G02230 Aquilegia oxysepala
Aqoxy2G02231 Aquilegia oxysepala
Aqoxy5G00126 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.663WU2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A194LB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AAHQ22 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GBAH2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6152F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9PCE5 Arachis hypogaea
AT2G20370 Arabidopsis thaliana
AT2G29040 Arabidopsis thaliana
AT2G31990 Arabidopsis thaliana
AT2G32740 Arabidopsis thaliana
AT2G32750 Arabidopsis thaliana
AT4G13990 Arabidopsis thaliana
ATR0559G277 Amborella trichopoda
ATR0787G148 Amborella trichopoda
Atru.chr3.1803 Acer truncatum
Atru.chr4.1556 Acer truncatum
Atru.chr4.1559 Acer truncatum
Atru.chr4.1562 Acer truncatum
Atru.chr4.1564 Acer truncatum
Atru.chr5.1867 Acer truncatum
AUR62001773 Chenopodium quinoa
AUR62004219 Chenopodium quinoa
AUR62008804 Chenopodium quinoa
AUR62009561 Chenopodium quinoa
AUR62013629 Chenopodium quinoa
AUR62018497 Chenopodium quinoa
AUR62018498 Chenopodium quinoa
AUR62020922 Chenopodium quinoa
AUR62020923 Chenopodium quinoa
AUR62025435 Chenopodium quinoa
AUR62042400 Chenopodium quinoa
AUR62042401 Chenopodium quinoa
BcaB01g04000 Brassica carinata
BcaB01g04002 Brassica carinata
BcaB02g10225 Brassica carinata
BcaB02g10436 Brassica carinata
BcaB02g10497 Brassica carinata
BcaB03g16830 Brassica carinata
BcaB04g18100 Brassica carinata
BcaB06g28271 Brassica carinata
BcaB06g28631 Brassica carinata
BcaB07g31590 Brassica carinata
BcaC01g05922 Brassica carinata
BcaC01g05923 Brassica carinata
BcaC02g07887 Brassica carinata
BcaC02g08119 Brassica carinata
BcaC02g11037 Brassica carinata
BcaC04g22791 Brassica carinata
BcaC04g22793 Brassica carinata
BcaC06g36725 Brassica carinata
BcaC07g37703 Brassica carinata
BcaNung06787 Brassica carinata
BcaNung06789 Brassica carinata
BolC3t14518H Brassica oleracea
BolC4t23238H Brassica oleracea
BolC4t23310H Brassica oleracea
BolC4t23713H Brassica oleracea
BolC4t27344H Brassica oleracea
BolC7t40513H Brassica oleracea
BolC8t48080H Brassica oleracea
BolC9t54432H Brassica oleracea
BraA03t11061Z Brassica rapa
BraA03t11090Z Brassica rapa
BraA04t17768Z Brassica rapa
BraA04t17982Z Brassica rapa
BraA05t20225Z Brassica rapa
BraA05t20291Z Brassica rapa
BraA07t27826Z Brassica rapa
BraA07t29651Z Brassica rapa
BraA08t33018Z Brassica rapa
BraA09t36932Z Brassica rapa
C03p21350 Brassica napus
C04p16820 Brassica napus
C04p17640 Brassica napus
C04p21930 Brassica napus
C04p58160 Brassica napus
C07p00710 Brassica napus
C09p15260 Brassica napus
CAN.G479.61 Capsicum annuum
CAN.G536.9 Capsicum annuum
CANSAT54G1312 Cannabis sativa
CANSAT78G1732 Cannabis sativa
CANSAT78G2039 Cannabis sativa
CARHR110900 Cardamine hirsuta
CARHR122260 Cardamine hirsuta
CARHR125740 Cardamine hirsuta
CARHR125750 Cardamine hirsuta
CARHR126630 Cardamine hirsuta
CARHR126640 Cardamine hirsuta
CARHR219960 Cardamine hirsuta
Carub.0003s3476 Capsella rubella
Carub.0004s1002 Capsella rubella
Carub.0004s1332 Capsella rubella
Carub.0004s1410 Capsella rubella
Carub.0004s1411 Capsella rubella
Carub.0007s2844 Capsella rubella
Ca_08748_v3 Cicer arietinum L.
Ca_09645_v3 Cicer arietinum L.
Ca_16421_v3 Cicer arietinum L.
Cc01_g13000 Coffea canephora
CDE02G0650 Ceratophyllum demersum
CDE04G1555 Ceratophyllum demersum
CDE07G1714 Ceratophyllum demersum
CDE08G0379 Ceratophyllum demersum
Cfa002490 Carpinus fangiana
Cfa008637 Carpinus fangiana
Cfa008700 Carpinus fangiana
Cfa011516 Carpinus fangiana
Ciclev10004973m.g Citrus clementina
Ciclev10006440m.g Citrus clementina
Ciclev10006490m.g Citrus clementina
CiPaw.01G115700 Carya illinoinensis
CiPaw.02G061400 Carya illinoinensis
CiPaw.03G271400 Carya illinoinensis
ClCG00G001620 Citrullus lanatus
ClCG06G003240 Citrullus lanatus
ClCG07G001430 Citrullus lanatus
ClCG07G015480 Citrullus lanatus
COL.COLO4_07394 Corchorus olitorius
COL.COLO4_07396 Corchorus olitorius
COL.COLO4_10207 Corchorus olitorius
COL.COLO4_18526 Corchorus olitorius
Cpa.g.sc157.42 Carica papaya
Cpa.g.sc157.43 Carica papaya
Cpa.g.sc8.309 Carica papaya
Cpa.g.sc81.132 Carica papaya
Cpa.g.sc87.37 Carica papaya
CsaV3_3G028430 Cucumis sativus L.
CsaV3_4G003100 Cucumis sativus L.
CsaV3_6G001050 Cucumis sativus L.
CSS0016447 Camellia sinensis var. sinensis
CSS0019398 Camellia sinensis var. sinensis
CSS0028123 Camellia sinensis var. sinensis
CSS0042818 Camellia sinensis var. sinensis
CSS0049986 Camellia sinensis var. sinensis
DCAR_000570 Daucus carota
DCAR_012593 Daucus carota
DCAR_018913 Daucus carota
DCAR_027481 Daucus carota
DCAR_030737 Daucus carota
DCAR_030738 Daucus carota
Dinv13675 Davidia involucrata
Dinv17017 Davidia involucrata
Dinv19264 Davidia involucrata
Dinv42965 Davidia involucrata
Dinv43134 Davidia involucrata
Duzib133G1336 Durio zibethinus
Duzib151G0198 Durio zibethinus
Duzib151G0754 Durio zibethinus
Duzib151G0895 Durio zibethinus
Duzib168G1385 Durio zibethinus
Duzib211G0558 Durio zibethinus
Duzib212G0605 Durio zibethinus
Duzib212G0866 Durio zibethinus
Duzib212G1008 Durio zibethinus
ECA246G3438 Erigeron canadensis
ECA247G1438 Erigeron canadensis
ECA248G0215 Erigeron canadensis
ECA248G3387 Erigeron canadensis
EL10Ac1g00897 Beta vulgaris
EL10Ac1g00898 Beta vulgaris
EL10Ac7g16032 Beta vulgaris
EL10Ac7g17694 Beta vulgaris
EL10Ac7g17829 Beta vulgaris
Eucgr.A01318 Eucalyptus grandis
Eucgr.B02354 Eucalyptus grandis
Eucgr.H00492 Eucalyptus grandis
Eucgr.H02667 Eucalyptus grandis
Eucgr.H02673 Eucalyptus grandis
FAN04G1061 Fragaria x ananassa
FAN07G1727 Fragaria x ananassa
FAN07G2426 Fragaria x ananassa
FAN08G1895 Fragaria x ananassa
FAN11G2555 Fragaria x ananassa
FAN12G0741 Fragaria x ananassa
FAN15G3435 Fragaria x ananassa
FAN16G0202 Fragaria x ananassa
FAN17G0874 Fragaria x ananassa
FAN17G2433 Fragaria x ananassa
FAN17G2728 Fragaria x ananassa
FAN18G2673 Fragaria x ananassa
FAN21G2512 Fragaria x ananassa
FAN24G0643 Fragaria x ananassa
FAN25G1582 Fragaria x ananassa
FAN27G1535 Fragaria x ananassa
FvH4_2g20390 Fragaria vesca
FvH4_3g36470 Fragaria vesca
FvH4_4g13210 Fragaria vesca
FvH4_4g13212 Fragaria vesca
FvH4_4g13213 Fragaria vesca
FvH4_4g13214 Fragaria vesca
FvH4_5g28240 Fragaria vesca
Glyma.03G167650 Glycine max
Glyma.08G259400 Glycine max
Glyma.10G040700 Glycine max
Glyma.11G254500 Glycine max
Glyma.13G127300 Glycine max
Glyma.18G002600 Glycine max
Glyma.18G283600 Glycine max
Glyma.18G283700 Glycine max
Glyma.19G168800 Glycine max
Gohir.A05G094901 Gossypium hirsutum
Gohir.A07G098850 Gossypium hirsutum
Gohir.A07G153000 Gossypium hirsutum
Gohir.A09G206900 Gossypium hirsutum
Gohir.A09G209200 Gossypium hirsutum
Gohir.A10G128600 Gossypium hirsutum
Gohir.A10G128701 Gossypium hirsutum
Gohir.A10G129300 Gossypium hirsutum
Gohir.A11G133800 Gossypium hirsutum
Gohir.D05G095120 Gossypium hirsutum
Gohir.D05G095300 Gossypium hirsutum
Gohir.D07G103350 Gossypium hirsutum
Gohir.D09G200500 Gossypium hirsutum
Gohir.D09G202600 Gossypium hirsutum
Gohir.D10G136900 Gossypium hirsutum
Gohir.D10G137400 Gossypium hirsutum
Gohir.D11G139800 Gossypium hirsutum
Gorai.001G111200 Gossypium raimondii
Gorai.006G224200 Gossypium raimondii
Gorai.006G226500 Gossypium raimondii
Gorai.007G150100 Gossypium raimondii
Gorai.009G098600 Gossypium raimondii
Gorai.011G152000 Gossypium raimondii
Gorai.011G152600 Gossypium raimondii
GSVIVG01031644001 Vitis vinifera
HanXRQChr02g0033221 Helianthus annuus
HanXRQChr10g0280211 Helianthus annuus
HanXRQChr10g0280221 Helianthus annuus
Haze_11662 Corylus avellana
Haze_11708 Corylus avellana
Haze_24113 Corylus avellana
Hma1.2p1_0615F.1_g189880 Hydrangea macrophylla
HPP92_001679 Vanilla planifolia
HPP92_013020 Vanilla planifolia
Hund19036 Selenicereus undatus
Lalb_Chr01g0003641 Lupinus albus
Lalb_Chr02g0152751 Lupinus albus
Lalb_Chr08g0230501 Lupinus albus
Lalb_Chr15g0080011 Lupinus albus
Lalb_Chr17g0336431 Lupinus albus
Lalb_Chr20g0113561 Lupinus albus
Lalb_Chr25g0289831 Lupinus albus
Lj1C74T15 Lonicera japonica
Lj1g0023074 Lotus japonicus
Lj2P1064T36 Lonicera japonica
Lj2P1142T38 Lonicera japonica
Lj2P1142T56 Lonicera japonica
Lj3g0000989 Lotus japonicus
Lj5g0005062 Lotus japonicus
Lj6g0011205 Lotus japonicus
Lj6P367T44 Lonicera japonica
Lsat_1_v5_gn_5_170001 Lactuca sativa
Lsat_1_v5_gn_5_181120 Lactuca sativa
Lsat_1_v5_gn_8_86500 Lactuca sativa
Lsat_1_v5_gn_9_11561 Lactuca sativa
Lsat_1_v5_gn_9_11581 Lactuca sativa
Manes.01G003300 Manihot esculenta
Manes.01G056300 Manihot esculenta
Manes.02G131600 Manihot esculenta
Manes.05G194400 Manihot esculenta
Manes.05G202000 Manihot esculenta
Manes.12G038200 Manihot esculenta
Manes.13G039300 Manihot esculenta
Mapoly0068s0073 Marchantia polymorpha
Mapoly0074s0038 Marchantia polymorpha
Mapoly0097s0076 Marchantia polymorpha
MBI05_g28379_MAGBIO Magnolia biondii
MBI07_g21065_MAGBIO Magnolia biondii
MD00G1064500 Malus domestica
MD00G1064600 Malus domestica
MD03G1090400 Malus domestica
MD04G1017500 Malus domestica
MD04G1017600 Malus domestica
MD04G1017700 Malus domestica
MD04G1017900 Malus domestica
MD05G1187900 Malus domestica
MD08G1246000 Malus domestica
MD10G1175500 Malus domestica
MD11G1100100 Malus domestica
MD15G1438500 Malus domestica
Medtr1g069460 Medicago truncatula
Medtr3g007840 Medicago truncatula
Medtr3g084400 Medicago truncatula
Medtr4g129930 Medicago truncatula
Medtr5g055350 Medicago truncatula
Medtr5g095940 Medicago truncatula
Medtr5g095950 Medicago truncatula
Medtr7g098650 Medicago truncatula
MELO3C012836.2 Cucumis melo
MELO3C017736.2 Cucumis melo
MELO3C021163.2 Cucumis melo
Migut.D00481 Erythranthe guttata
Migut.D02084 Erythranthe guttata
MSTRG.18356 Avicennia marina
MSTRG.21457 Avicennia marina
Nitab4.5_0000845g0180 Nicotiana tabacum
Nitab4.5_0001211g0210 Nicotiana tabacum
Nitab4.5_0002435g0040 Nicotiana tabacum
Nitab4.5_0005900g0010 Nicotiana tabacum
Nn1g02999 Nelumbo nucifera
Nn2g11140 Nelumbo nucifera
Nn2g13374 Nelumbo nucifera
Nn3g19805 Nelumbo nucifera
Nn5g26770 Nelumbo nucifera
Oeu026806.1 Olea europaea
Oeu046390.1 Olea europaea
Oeu052084.1 Olea europaea
Oeu053901.1 Olea europaea
Os03g0144300 Oryza sativa ssp. japonica
Os03g0144500 Oryza sativa ssp. japonica
Os03g0144800 Oryza sativa ssp. japonica
Os10g0458900 Oryza sativa ssp. japonica
Os10g0459300 Oryza sativa ssp. japonica
Os10g0459600 Oryza sativa ssp. japonica
Os10g0459700 Oryza sativa ssp. japonica
Os12g0572700 Oryza sativa ssp. japonica
Peaxi162Scf00043g00252 Petunia axillaris
Peaxi162Scf00274g00035 Petunia axillaris
PGR031G0298 Punica granatum
PGR083G0649 Punica granatum
PGR102G0220 Punica granatum
PGR142G1320 Punica granatum
PGR142G4247 Punica granatum
PGSC0003DMG400008579 Solanum tuberosum
PGSC0003DMG400026296 Solanum tuberosum
Phvul.001G165332 Phaseolus vulgaris
Phvul.001G266100 Phaseolus vulgaris
Phvul.007G153600 Phaseolus vulgaris
Phvul.008G017900 Phaseolus vulgaris
Potri.001G321000 Populus trichocarpa
Potri.002G256200 Populus trichocarpa
Potri.009G032500 Populus trichocarpa
Potri.014G147800 Populus trichocarpa
Pp3c16_19330 Physcomitrium patens
Pp3c18_14230 Physcomitrium patens
Pp3c19_15740 Physcomitrium patens
Pp3c1_25640 Physcomitrium patens
Pp3c22_13750 Physcomitrium patens
Pp3c25_6620 Physcomitrium patens
Pp3c26_14140 Physcomitrium patens
Pp3c26_14180 Physcomitrium patens
Pp3c3_2340 Physcomitrium patens
Prupe.1G165700 Prunus persica
Prupe.1G165800 Prunus persica
Prupe.1G166100 Prunus persica
Prupe.1G166200 Prunus persica
Prupe.1G166300 Prunus persica
Prupe.1G166600 Prunus persica
Prupe.1G581600 Prunus persica
Prupe.6G074500 Prunus persica
Psat2g066760 Pisum sativum
Psat3g051600 Pisum sativum
Psat5g099560 Pisum sativum
Psat6g062560 Pisum sativum
PSO151G0050 Papaver somniferum
PSO151G0167 Papaver somniferum
PSO339G3353 Papaver somniferum
PSO339G4649 Papaver somniferum
PSO764G0055 Papaver somniferum
PSO832G3707 Papaver somniferum
QL01p031526 Quercus lobata
QL06p026930 Quercus lobata
QL06p027797 Quercus lobata
QL06p027812 Quercus lobata
QL09p041624 Quercus lobata
RcHm_v2.0_Chr1g0331241 Rosa chinensis
RcHm_v2.0_Chr1g0331251 Rosa chinensis
RcHm_v2.0_Chr1g0331261 Rosa chinensis
RcHm_v2.0_Chr4g0413361 Rosa chinensis
RcHm_v2.0_Chr4g0413371 Rosa chinensis
RcHm_v2.0_Chr4g0413411 Rosa chinensis
RcHm_v2.0_Chr5g0065321 Rosa chinensis
RcHm_v2.0_Chr6g0286491 Rosa chinensis
RcHm_v2.0_Chr7g0220401 Rosa chinensis
Rhsim01G0260100 Rhododendron simsii
Rhsim09G0052600 Rhododendron simsii
Rhsim13G0081600 Rhododendron simsii
Sabra02G0194700 Salix brachista
Sabra09G0023100 Salix brachista
Sabra14G0111600 Salix brachista
Sabra16G0203500 Salix brachista
SalBow3G4046 Salvia bowleyana
SalBow4G2338 Salvia bowleyana
Sc05g0002870 Simmondsia chinensis
Sc12g0001460 Simmondsia chinensis
Sc13g0000600 Simmondsia chinensis
Sc21g0005850 Simmondsia chinensis
Sed0004406 Sechium edule
Sed0006220 Sechium edule
Sed0008087 Sechium edule
Sed0012075 Sechium edule
Sed0026385 Sechium edule
SEGI_36893 Sequoiadendron giganteum
SGA_v2.0_scaffold138G35182 Striga asiatica
SGA_v2.0_scaffold36G14510 Striga asiatica
SGA_v2.0_scaffold41G15709 Striga asiatica
SHI01017 Sapria himalayana
SHI26733 Sapria himalayana
SMO117G0076 Selaginella moellendorffii
SMO334G0028 Selaginella moellendorffii
SMO347G0601 Selaginella moellendorffii
Solyc03g115750.1 Solanum lycopersicum
Solyc09g064470.3 Solanum lycopersicum
Solyc09g064480.1 Solanum lycopersicum
Sopen03g034730 Solanum pennellii
Sopen09g025610 Solanum pennellii
Sp3g33620 Schrenkiella parvula
Sp4g11840 Schrenkiella parvula
Sp4g14380 Schrenkiella parvula
Sp4g15080 Schrenkiella parvula
Sp4g15090 Schrenkiella parvula
Sp7g11790 Schrenkiella parvula
TAR362G0378 Trochodendron aralioides
TAR633G1313 Trochodendron aralioides
TAR636G0350 Trochodendron aralioides
TAR636G1717 Trochodendron aralioides
THA.LOC104800670 Tarenaya hassleriana
THA.LOC104808689 Tarenaya hassleriana
THA.LOC104814532 Tarenaya hassleriana
THA.LOC104827381 Tarenaya hassleriana
Thecc.01G249600 Theobroma cacao
Thecc.04G187900 Theobroma cacao
Thecc.04G194000 Theobroma cacao
Thecc.04G194100 Theobroma cacao
Thecc.09G320100 Theobroma cacao
Thhalv10001932m.g Eutrema salsugineum
Thhalv10016337m.g Eutrema salsugineum
Thhalv10016613m.g Eutrema salsugineum
Thhalv10017561m.g Eutrema salsugineum
Thhalv10017898m.g Eutrema salsugineum
Thhalv10024922m.g Eutrema salsugineum
TPR.G20076 Trifolium pratense
TPR.G28945 Trifolium pratense
TPR.G36431 Trifolium pratense
TPR.G5872 Trifolium pratense
TPR.G9443 Trifolium pratense
TWI09G0752 Tripterygium wilfordii
TWI12G1448 Tripterygium wilfordii
TWI18G0673 Tripterygium wilfordii
TWI31G1117 Tripterygium wilfordii
TWI53G1204 Tripterygium wilfordii
TWI75G0562 Tripterygium wilfordii
unitig_22.g6305 Utricularia gibba
unitig_746.g26728 Utricularia gibba
unitig_8.g3075 Utricularia gibba
vmacro00495 Vaccinium macrocarpon
vmacro03064 Vaccinium macrocarpon
VMungo0720G1044 Vigna mungo
VMungo1383G1164 Vigna mungo
VMungo1383G2425 Vigna mungo
VMungo1383G2864 Vigna mungo
Zm00001eb003600 Zea mays
Zm00001eb003610 Zea mays
Zm00001eb003620 Zea mays
Zm00001eb003630 Zea mays
Zm00001eb003650 Zea mays
Zm00001eb046600 Zea mays
Zm00001eb046610 Zea mays
Zm00001eb046620 Zea mays
Zm00001eb046630 Zea mays
Zm00001eb402930 Zea mays

User provided reference genes

Program Settings