Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p29480 Brassica napus
A03p17700 Brassica napus
A04p23080 Brassica napus
A04p24200 Brassica napus
A04p29930 Brassica napus
A05p06190 Brassica napus
A05p14100 Brassica napus
A09p66630 Brassica napus
A10p05510 Brassica napus
A10p05540 Brassica napus
Aa31LG5G19320 Aethionema arabicum
Aa31LG5G5390 Aethionema arabicum
Aa31LG5G6400 Aethionema arabicum
Aa31LG6G1180 Aethionema arabicum
Actinidia05669 Actinidia chinensis
Actinidia13772 Actinidia chinensis
Actinidia23662 Actinidia chinensis
Actinidia23856 Actinidia chinensis
Actinidia26522 Actinidia chinensis
Ah.09g237810 Amaranthus hybridus
Ah.10g036340 Amaranthus hybridus
AL1G17030 Arabidopsis lyrata
AL2G17780 Arabidopsis lyrata
AL4G15110 Arabidopsis lyrata
AL4G25050 Arabidopsis lyrata
AL4G25170 Arabidopsis lyrata
AL4G26790 Arabidopsis lyrata
AL4G37970 Arabidopsis lyrata
AL8G12560 Arabidopsis lyrata
Aqoxy3G00381 Aquilegia oxysepala
Aqoxy4G00547 Aquilegia oxysepala
Aqoxy4G00548 Aquilegia oxysepala
Aqoxy4G00549 Aquilegia oxysepala
Aqoxy4G00550 Aquilegia oxysepala
Aqoxy4G00551 Aquilegia oxysepala
Aqoxy4G01982 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6496KA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6S9UGS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D29S0W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I209VN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQNY3N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PLI8Q6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6LAIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WV7YAP Arachis hypogaea
AT1G06990 Arabidopsis thaliana
AT1G58430 Arabidopsis thaliana
AT2G24560 Arabidopsis thaliana
AT2G30220 Arabidopsis thaliana
AT2G30310 Arabidopsis thaliana
AT2G31540 Arabidopsis thaliana
AT2G31550 Arabidopsis thaliana
AT2G40250 Arabidopsis thaliana
AT5G45960 Arabidopsis thaliana
ATR0594G070 Amborella trichopoda
Atru.chr10.1748 Acer truncatum
Atru.chr12.866 Acer truncatum
Atru.chr12.869 Acer truncatum
AUR62001866 Chenopodium quinoa
AUR62009663 Chenopodium quinoa
AUR62012279 Chenopodium quinoa
AUR62014915 Chenopodium quinoa
AUR62022921 Chenopodium quinoa
AUR62031120 Chenopodium quinoa
BcaB02g06772 Brassica carinata
BcaB02g09037 Brassica carinata
BcaB02g10398 Brassica carinata
BcaB06g28358 Brassica carinata
BcaC02g07342 Brassica carinata
BcaC02g07367 Brassica carinata
BcaC02g08030 Brassica carinata
BcaC02g11260 Brassica carinata
BcaC02g12141 Brassica carinata
BcaC03g16806 Brassica carinata
BcaC05g24663 Brassica carinata
BcaC05g24664 Brassica carinata
BcaC05g24665 Brassica carinata
BcaC07g42031 Brassica carinata
BcaC07g42554 Brassica carinata
BolC2t10729H Brassica oleracea
BolC4t22338H Brassica oleracea
BolC4t23394H Brassica oleracea
BolC4t27432H Brassica oleracea
BolC4t27584H Brassica oleracea
BolC4t28295H Brassica oleracea
BolC5t29279H Brassica oleracea
BolC5t29280H Brassica oleracea
BolC8t52613H Brassica oleracea
BraA02t07975Z Brassica rapa
BraA03t11035Z Brassica rapa
BraA04t17840Z Brassica rapa
BraA04t17940Z Brassica rapa
BraA04t18515Z Brassica rapa
BraA05t19583Z Brassica rapa
BraA05t20337Z Brassica rapa
BraA09t42003Z Brassica rapa
BraA10t42814Z Brassica rapa
BraA10t42815Z Brassica rapa
C02p46790 Brassica napus
C03p20790 Brassica napus
C04p07120 Brassica napus
C04p07140 Brassica napus
C04p18460 Brassica napus
C04p59220 Brassica napus
C04p60920 Brassica napus
C04p67900 Brassica napus
C05p05080 Brassica napus
C05p05090 Brassica napus
C08p50850 Brassica napus
CAN.G25.15 Capsicum annuum
CAN.G361.11 Capsicum annuum
CAN.G361.13 Capsicum annuum
CAN.G361.8 Capsicum annuum
CAN.G361.9 Capsicum annuum
CAN.G369.2 Capsicum annuum
CAN.G551.7 Capsicum annuum
CANSAT35G1665 Cannabis sativa
CANSAT54G2896 Cannabis sativa
CANSAT56G0394 Cannabis sativa
CANSAT56G0552 Cannabis sativa
CANSAT56G4359 Cannabis sativa
CARHR006660 Cardamine hirsuta
CARHR006670 Cardamine hirsuta
CARHR123630 Cardamine hirsuta
CARHR125180 Cardamine hirsuta
CARHR135290 Cardamine hirsuta
CARHR175970 Cardamine hirsuta
CARHR175980 Cardamine hirsuta
CARHR283970 Cardamine hirsuta
Carub.0001s0627 Capsella rubella
Carub.0002s0608 Capsella rubella
Carub.0004s0392 Capsella rubella
Carub.0004s1138 Capsella rubella
Carub.0004s1146 Capsella rubella
Carub.0004s1285 Capsella rubella
Carub.0004s2247 Capsella rubella
Carub.0008s0196 Capsella rubella
Ca_18619_v3 Cicer arietinum L.
Cc01_g14890 Coffea canephora
Cc02_g14260 Coffea canephora
Cc02_g14270 Coffea canephora
CDE04G0589 Ceratophyllum demersum
CDE08G0349 Ceratophyllum demersum
Cfa011782 Carpinus fangiana
Cfa011783 Carpinus fangiana
Cfa011784 Carpinus fangiana
Ciclev10017661m.g Citrus clementina
Ciclev10030260m.g Citrus clementina
Ciclev10031929m.g Citrus clementina
CiPaw.02G193100 Carya illinoinensis
CiPaw.10G054700 Carya illinoinensis
CiPaw.10G054800 Carya illinoinensis
CiPaw.13G068800 Carya illinoinensis
CiPaw.14G054100 Carya illinoinensis
CiPaw.14G054200 Carya illinoinensis
ClCG01G023460 Citrullus lanatus
ClCG02G006480 Citrullus lanatus
ClCG02G007920 Citrullus lanatus
ClCG02G015350 Citrullus lanatus
ClCG02G015360 Citrullus lanatus
ClCG02G015390 Citrullus lanatus
ClCG03G007970 Citrullus lanatus
ClCG08G001570 Citrullus lanatus
COL.COLO4_11158 Corchorus olitorius
COL.COLO4_11159 Corchorus olitorius
COL.COLO4_18784 Corchorus olitorius
COL.COLO4_28621 Corchorus olitorius
COL.COLO4_31388 Corchorus olitorius
Cpa.g.sc2.350 Carica papaya
Cpa.g.sc7.34 Carica papaya
CsaV3_1G012620 Cucumis sativus L.
CsaV3_2G035820 Cucumis sativus L.
CsaV3_6G015850 Cucumis sativus L.
CsaV3_6G015860 Cucumis sativus L.
CsaV3_6G015870 Cucumis sativus L.
CsaV3_6G050580 Cucumis sativus L.
CSS0006013 Camellia sinensis var. sinensis
CSS0009875 Camellia sinensis var. sinensis
CSS0011075 Camellia sinensis var. sinensis
CSS0011603 Camellia sinensis var. sinensis
CSS0011801 Camellia sinensis var. sinensis
CSS0013688 Camellia sinensis var. sinensis
CSS0022036 Camellia sinensis var. sinensis
CSS0022386 Camellia sinensis var. sinensis
CSS0025839 Camellia sinensis var. sinensis
CSS0037077 Camellia sinensis var. sinensis
CSS0045722 Camellia sinensis var. sinensis
DCAR_004030 Daucus carota
DCAR_004031 Daucus carota
DCAR_005708 Daucus carota
DCAR_007781 Daucus carota
DCAR_007977 Daucus carota
DCAR_007978 Daucus carota
DCAR_007979 Daucus carota
DCAR_012268 Daucus carota
DCAR_018233 Daucus carota
Dinv09676 Davidia involucrata
Dinv09677 Davidia involucrata
Dinv40627 Davidia involucrata
Dinv40628 Davidia involucrata
Dinv41266 Davidia involucrata
Duzib084G1108 Durio zibethinus
Duzib168G1381 Durio zibethinus
Duzib168G2265 Durio zibethinus
Duzib170G0750 Durio zibethinus
Duzib192G0529 Durio zibethinus
Duzib235G1316 Durio zibethinus
ECA234G4255 Erigeron canadensis
ECA236G2057 Erigeron canadensis
ECA240G2685 Erigeron canadensis
ECA247G2964 Erigeron canadensis
ECA248G0663 Erigeron canadensis
ECA248G3328 Erigeron canadensis
EL10Ac2g04873 Beta vulgaris
EL10Ac7g15925 Beta vulgaris
EL10Ac8g20471 Beta vulgaris
Eucgr.B04006 Eucalyptus grandis
Eucgr.D00575 Eucalyptus grandis
Eucgr.D00576 Eucalyptus grandis
Eucgr.F03393 Eucalyptus grandis
FAN01G1978 Fragaria x ananassa
FAN03G1597 Fragaria x ananassa
FAN06G1392 Fragaria x ananassa
FAN10G1166 Fragaria x ananassa
FAN11G1374 Fragaria x ananassa
FAN16G1339 Fragaria x ananassa
FAN25G2226 Fragaria x ananassa
FvH4_3g39810 Fragaria vesca
FvH4_7g24850 Fragaria vesca
Glyma.02G232200 Glycine max
Glyma.02G232400 Glycine max
Glyma.02G264100 Glycine max
Glyma.07G203200 Glycine max
Glyma.13G172500 Glycine max
Glyma.13G233700 Glycine max
Glyma.15G079300 Glycine max
Gohir.A03G063100 Gossypium hirsutum
Gohir.A05G157400 Gossypium hirsutum
Gohir.A05G332150 Gossypium hirsutum
Gohir.D03G103200 Gossypium hirsutum
Gohir.D04G070850 Gossypium hirsutum
Gohir.D05G160200 Gossypium hirsutum
Gorai.003G108700 Gossypium raimondii
Gorai.009G165300 Gossypium raimondii
Gorai.012G079700 Gossypium raimondii
GSVIVG01021147001 Vitis vinifera
GSVIVG01024630001 Vitis vinifera
HanXRQChr04g0116931 Helianthus annuus
HanXRQChr05g0132411 Helianthus annuus
HanXRQChr07g0205961 Helianthus annuus
HanXRQChr08g0214001 Helianthus annuus
HanXRQChr08g0228591 Helianthus annuus
Haze_06323 Corylus avellana
Haze_24415 Corylus avellana
Haze_24416 Corylus avellana
Hma1.2p1_1586F.1_g292150 Hydrangea macrophylla
Hma1.2p1_1797F.1_g302830 Hydrangea macrophylla
HPP92_012968 Vanilla planifolia
HPP92_021478 Vanilla planifolia
Hund18953 Selenicereus undatus
Hund18976 Selenicereus undatus
Hund23887 Selenicereus undatus
Lalb_Chr04g0250471 Lupinus albus
Lalb_Chr04g0251921 Lupinus albus
Lalb_Chr05g0218641 Lupinus albus
Lalb_Chr05g0218651 Lupinus albus
Lalb_Chr08g0231581 Lupinus albus
Lalb_Chr08g0231591 Lupinus albus
Lalb_Chr10g0103621 Lupinus albus
Lalb_Chr15g0089581 Lupinus albus
Lalb_Chr17g0345431 Lupinus albus
Lalb_Chr18g0059251 Lupinus albus
Lalb_Chr18g0059271 Lupinus albus
Lj1A1198G24 Lonicera japonica
Lj1A1198T23 Lonicera japonica
Lj2A294G43 Lonicera japonica
Lj2C1093G6 Lonicera japonica
Lj4g0011742 Lotus japonicus
Lj6A273G10 Lonicera japonica
Lj6A273G11 Lonicera japonica
Lj6A274G14 Lonicera japonica
Lj6A278G14 Lonicera japonica
Lj6g0005380 Lotus japonicus
Lj6g0011760 Lotus japonicus
Lj9A19T12 Lonicera japonica
Lj9A28T6 Lonicera japonica
Lj9A30G20 Lonicera japonica
Lj9C20T0 Lonicera japonica
Lj9C28G1 Lonicera japonica
Lj9P31T3 Lonicera japonica
LjContig00141g0016924 Lotus japonicus
LjContig00357g0027092 Lotus japonicus
Lsat_1_v5_gn_1_120500 Lactuca sativa
Lsat_1_v5_gn_1_120521 Lactuca sativa
Lsat_1_v5_gn_4_50981 Lactuca sativa
Lsat_1_v5_gn_5_110740 Lactuca sativa
Lsat_1_v5_gn_5_174140 Lactuca sativa
Lsat_1_v5_gn_6_80561 Lactuca sativa
Lsat_1_v5_gn_7_21860 Lactuca sativa
Lsat_1_v5_gn_8_158140 Lactuca sativa
Lsat_1_v5_gn_9_14680 Lactuca sativa
Manes.07G132400 Manihot esculenta
Manes.10G010000 Manihot esculenta
Manes.13G001700 Manihot esculenta
Manes.17G051800 Manihot esculenta
MBI03_g43241_MAGBIO Magnolia biondii
MBI03_g44581_MAGBIO Magnolia biondii
MBI13_g37866_MAGBIO Magnolia biondii
MBI15_g15938_MAGBIO Magnolia biondii
MBI17_g21977_MAGBIO Magnolia biondii
MD01G1156400 Malus domestica
MD07G1225100 Malus domestica
MD11G1058600 Malus domestica
Medtr2g015080 Medicago truncatula
Medtr4g087985 Medicago truncatula
Medtr5g074210 Medicago truncatula
Medtr5g074270 Medicago truncatula
Medtr5g083040 Medicago truncatula
MELO3C007240.2 Cucumis melo
MELO3C024761.2 Cucumis melo
MELO3C025689.2 Cucumis melo
MELO3C025693.2 Cucumis melo
MELO3C025694.2 Cucumis melo
MELO3C035517.2 Cucumis melo
Migut.D00845 Erythranthe guttata
Migut.M01081 Erythranthe guttata
Migut.M01082 Erythranthe guttata
MSTRG.14721 Avicennia marina
Nitab4.5_0000409g0150 Nicotiana tabacum
Nitab4.5_0000719g0020 Nicotiana tabacum
Nitab4.5_0001222g0030 Nicotiana tabacum
Nitab4.5_0001427g0100 Nicotiana tabacum
Nitab4.5_0002114g0020 Nicotiana tabacum
Nitab4.5_0002114g0040 Nicotiana tabacum
Nitab4.5_0002114g0050 Nicotiana tabacum
Nitab4.5_0002587g0130 Nicotiana tabacum
Nitab4.5_0003289g0080 Nicotiana tabacum
Nitab4.5_0005130g0010 Nicotiana tabacum
Nitab4.5_0006148g0030 Nicotiana tabacum
Nitab4.5_0007978g0010 Nicotiana tabacum
Nitab4.5_0008483g0010 Nicotiana tabacum
Nitab4.5_0008483g0020 Nicotiana tabacum
Nitab4.5_0008770g0010 Nicotiana tabacum
Nitab4.5_0008770g0020 Nicotiana tabacum
Nitab4.5_0012400g0010 Nicotiana tabacum
Nitab4.5_0012976g0010 Nicotiana tabacum
Nitab4.5_0013076g0030 Nicotiana tabacum
Nitab4.5_0013425g0020 Nicotiana tabacum
Nn1g06347 Nelumbo nucifera
Nn1g06348 Nelumbo nucifera
Nn2g10946 Nelumbo nucifera
Nn5g27485 Nelumbo nucifera
Nn5g29918 Nelumbo nucifera
Nn6g35035 Nelumbo nucifera
Oeu009033.1 Olea europaea
Oeu026696.1 Olea europaea
Oeu039427.1 Olea europaea
Oeu050019.1 Olea europaea
Os01g0827700 Oryza sativa ssp. japonica
Os01g0832100 Oryza sativa ssp. japonica
Os05g0468500 Oryza sativa ssp. japonica
Peaxi162Scf00055g00143 Petunia axillaris
Peaxi162Scf00177g01232 Petunia axillaris
Peaxi162Scf00269g00018 Petunia axillaris
Peaxi162Scf00269g00121 Petunia axillaris
Peaxi162Scf00304g00014 Petunia axillaris
Peaxi162Scf00390g00825 Petunia axillaris
Peaxi162Scf00934g00140 Petunia axillaris
PGR004G1222 Punica granatum
PGR004G1976 Punica granatum
PGR004G2147 Punica granatum
PGR004G2362 Punica granatum
PGR004G2485 Punica granatum
PGR031G3091 Punica granatum
PGR102G1401 Punica granatum
PGR102G2794 Punica granatum
PGR102G2853 Punica granatum
PGR119G2386 Punica granatum
PGSC0003DMG400007815 Solanum tuberosum
PGSC0003DMG400010722 Solanum tuberosum
PGSC0003DMG400022820 Solanum tuberosum
PGSC0003DMG400026619 Solanum tuberosum
PGSC0003DMG400035739 Solanum tuberosum
Phvul.003G013500 Phaseolus vulgaris
Phvul.003G056700 Phaseolus vulgaris
Phvul.006G179600 Phaseolus vulgaris
Phvul.008G251600 Phaseolus vulgaris
Potri.008G076600 Populus trichocarpa
Potri.008G076700 Populus trichocarpa
Potri.011G061900 Populus trichocarpa
Potri.011G062000 Populus trichocarpa
Potri.013G153000 Populus trichocarpa
Prupe.2G253600 Prunus persica
Prupe.6G047900 Prunus persica
Psat1g200800 Pisum sativum
Psat7g116920 Pisum sativum
PSO017G6931 Papaver somniferum
PSO339G5006 Papaver somniferum
PSO349G0204 Papaver somniferum
PSO675G3874 Papaver somniferum
PSO765G0035 Papaver somniferum
PSO801G0710 Papaver somniferum
QL01p026134 Quercus lobata
QL01p026148 Quercus lobata
QL05p043933 Quercus lobata
QL05p043962 Quercus lobata
QL05p043976 Quercus lobata
QL08p063547 Quercus lobata
RcHm_v2.0_Chr1g0370731 Rosa chinensis
RcHm_v2.0_Chr5g0071691 Rosa chinensis
Rhsim02G0138100 Rhododendron simsii
Rhsim05G0207000 Rhododendron simsii
Rhsim05G0207100 Rhododendron simsii
Rhsim06G0181000 Rhododendron simsii
Rhsim13G0063700 Rhododendron simsii
Rhsim13G0063800 Rhododendron simsii
Rhsim13G0174900 Rhododendron simsii
Rhsim13G0182300 Rhododendron simsii
Rhsim13G0182400 Rhododendron simsii
Rhsim13G0182700 Rhododendron simsii
Sabra08G0057000 Salix brachista
Sabra10G0138800 Salix brachista
Sabra11G0042300 Salix brachista
Sabra11G0043800 Salix brachista
Sabra13G0123000 Salix brachista
Sabra13G0123300 Salix brachista
SalBow6G0246 Salvia bowleyana
SalBow6G3239 Salvia bowleyana
SalBow6G5539 Salvia bowleyana
SalBow6G6690 Salvia bowleyana
SalBow7G2729 Salvia bowleyana
SalBow7G4328 Salvia bowleyana
SalBow8G2932 Salvia bowleyana
Sc21g0005310 Simmondsia chinensis
Sc24g0001200 Simmondsia chinensis
Sed0003313 Sechium edule
Sed0008989 Sechium edule
Sed0011338 Sechium edule
Sed0013272 Sechium edule
Sed0021662 Sechium edule
Sed0022120 Sechium edule
Sed0024379 Sechium edule
SEGI_04243 Sequoiadendron giganteum
SEGI_04915 Sequoiadendron giganteum
SEGI_08486 Sequoiadendron giganteum
SEGI_10875 Sequoiadendron giganteum
SEGI_14173 Sequoiadendron giganteum
SEGI_34105 Sequoiadendron giganteum
SEGI_39993 Sequoiadendron giganteum
SGA_v2.0_scaffold309G48131 Striga asiatica
SGA_v2.0_scaffold309G48149 Striga asiatica
SGA_v2.0_scaffold440G51654 Striga asiatica
SGA_v2.0_scaffold5282G54622 Striga asiatica
SGA_v2.0_scaffold60G20974 Striga asiatica
Solyc02g077340.1 Solanum lycopersicum
Solyc04g007440.1 Solanum lycopersicum
Solyc09g030370.3 Solanum lycopersicum
Solyc10g008810.3 Solanum lycopersicum
Solyc10g008820.4 Solanum lycopersicum
Solyc10g008830.2 Solanum lycopersicum
Solyc12g010560.3 Solanum lycopersicum
Sopen09g013440 Solanum pennellii
Sopen10g004590 Solanum pennellii
Sopen10g004620 Solanum pennellii
Sp1g05690 Schrenkiella parvula
Sp1g05700 Schrenkiella parvula
Sp2g10840 Schrenkiella parvula
Sp4g13990 Schrenkiella parvula
Sp4g22580 Schrenkiella parvula
TAR369G0149 Trochodendron aralioides
TAR627G1068 Trochodendron aralioides
TAR633G2186 Trochodendron aralioides
THA.LOC104806144 Tarenaya hassleriana
THA.LOC104810117 Tarenaya hassleriana
THA.LOC104815817 Tarenaya hassleriana
THA.LOC104826273 Tarenaya hassleriana
THA.LOC109116037 Tarenaya hassleriana
Thecc.04G162600 Theobroma cacao
Thecc.06G177500 Theobroma cacao
Thecc.09G358200 Theobroma cacao
Thecc.09G358300 Theobroma cacao
Thhalv10000926m.g Eutrema salsugineum
Thhalv10008013m.g Eutrema salsugineum
Thhalv10009433m.g Eutrema salsugineum
Thhalv10017743m.g Eutrema salsugineum
Thhalv10017765m.g Eutrema salsugineum
Thhalv10017802m.g Eutrema salsugineum
TPR.G11657 Trifolium pratense
TPR.G24970 Trifolium pratense
TPR.G40090 Trifolium pratense
TPR.G40779 Trifolium pratense
TWI38G1561 Tripterygium wilfordii
TWI75G0281 Tripterygium wilfordii
unitig_0.g198 Utricularia gibba
unitig_578.g16438 Utricularia gibba
unitig_8.g4631 Utricularia gibba
unitig_8.g4639 Utricularia gibba
unitig_8.g4640 Utricularia gibba
unitig_8.g4655 Utricularia gibba
vmacro01713 Vaccinium macrocarpon
vmacro03890 Vaccinium macrocarpon
vmacro15949 Vaccinium macrocarpon
vmacro22552 Vaccinium macrocarpon
VMungo0251G0116 Vigna mungo
VMungo0540G0167 Vigna mungo
VMungo0647G1726 Vigna mungo
VMungo1215G2385 Vigna mungo
Zm00001eb289980 Zea mays
Zm00001eb351770 Zea mays
Zm00001eb368570 Zea mays

User provided reference genes

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