Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p65270 Brassica napus
A09p37630 Brassica napus
Actinidia07600 Actinidia chinensis
Ah.09g237570 Amaranthus hybridus
AL1G42040 Arabidopsis lyrata
Aqoxy193s001 Aquilegia oxysepala
Aqoxy1G02279 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.45S4HY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MUCA0D Arachis hypogaea
AT1G28410 Arabidopsis thaliana
ATR0730G049 Amborella trichopoda
Atru.chr10.1799 Acer truncatum
Atru.chr10.1800 Acer truncatum
AUR62014866 Chenopodium quinoa
AUR62031072 Chenopodium quinoa
BcaC05g26860 Brassica carinata
BolC5t31458H Brassica oleracea
BraA09t39273Z Brassica rapa
C02p14100 Brassica napus
C05p27420 Brassica napus
CAN.G529.53 Capsicum annuum
CANSAT35G0297 Cannabis sativa
CARHR027920 Cardamine hirsuta
Carub.0001s2689 Capsella rubella
Carub.0008s0592 Capsella rubella
Ca_00359_v3 Cicer arietinum L.
Cc02_g13820 Coffea canephora
Cfa000525 Carpinus fangiana
Ciclev10018161m.g Citrus clementina
CiPaw.10G052600 Carya illinoinensis
ClCG03G008020 Citrullus lanatus
Cpa.g.sc27.6 Carica papaya
CsaV3_1G012550 Cucumis sativus L.
CSS0015196 Camellia sinensis var. sinensis
DCAR_008005 Daucus carota
Dinv40599 Davidia involucrata
Duzib160G0617 Durio zibethinus
ECA248G3772 Erigeron canadensis
EL10Ac8g20436 Beta vulgaris
Eucgr.E03244 Eucalyptus grandis
FAN11G2802 Fragaria x ananassa
FAN16G2340 Fragaria x ananassa
FvH4_3g08660 Fragaria vesca
Glyma.13G235800 Glycine max
Gohir.A01G124600 Gossypium hirsutum
Gohir.A01G131222 Gossypium hirsutum
Gohir.A02G158500 Gossypium hirsutum
Gohir.A05G159100 Gossypium hirsutum
Gohir.A09G104400 Gossypium hirsutum
Gohir.A10G027900 Gossypium hirsutum
Gohir.D10G028300 Gossypium hirsutum
Gorai.011G030100 Gossypium raimondii
GSVIVG01021110001 Vitis vinifera
HanXRQChr01g0016561 Helianthus annuus
HanXRQChr08g0213981 Helianthus annuus
Hma1.2p1_0558F.1_g178510 Hydrangea macrophylla
HPP92_005282 Vanilla planifolia
Hund23805 Selenicereus undatus
Lalb_Chr18g0059391 Lupinus albus
Lj6g0005430 Lotus japonicus
Lsat_1_v5_gn_1_120761 Lactuca sativa
Manes.16G031900 Manihot esculenta
MBI06_g04396_MAGBIO Magnolia biondii
MD10G1289400 Malus domestica
Medtr2g014440 Medicago truncatula
MELO3C000075.2 Cucumis melo
MELO3C027350.2 Cucumis melo
Migut.H01471 Erythranthe guttata
MSTRG.14713 Avicennia marina
Nitab4.5_0001955g0160 Nicotiana tabacum
Nn1g06424 Nelumbo nucifera
Oeu012152.1 Olea europaea
Os02g0305600 Oryza sativa ssp. japonica
Peaxi162Scf00926g00028 Petunia axillaris
PGR042G0911 Punica granatum
Phvul.006G182400 Phaseolus vulgaris
Potri.004G048500 Populus trichocarpa
Prupe.1G318200 Prunus persica
Prupe.3G304000 Prunus persica
Prupe.5G112500 Prunus persica
Psat1g202800 Pisum sativum
PSO675G5366 Papaver somniferum
PSO675G8572 Papaver somniferum
QL05p042219 Quercus lobata
RcHm_v2.0_Chr5g0009131 Rosa chinensis
Rhsim02G0134600 Rhododendron simsii
SalBow7G4252 Salvia bowleyana
SalBow7G4859 Salvia bowleyana
Sc17g0005950 Simmondsia chinensis
Sed0019225 Sechium edule
Solyc02g077690.4 Solanum lycopersicum
Sopen02g022590 Solanum pennellii
Sp1g24690 Schrenkiella parvula
TAR627G0071 Trochodendron aralioides
THA.LOC104814436 Tarenaya hassleriana
Thecc.06G181300 Theobroma cacao
Thhalv10008438m.g Eutrema salsugineum
TPR.G11645 Trifolium pratense
TWI63G0216 Tripterygium wilfordii
unitig_61.g26088 Utricularia gibba
vmacro15930 Vaccinium macrocarpon
VMungo0540G1135 Vigna mungo
Zm00001eb203200 Zea mays

User provided reference genes

Program Settings