Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p39470 Brassica napus
Aa31LG3G2030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1849 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.1850 Anthoceros agrestis
Actinidia28071 Actinidia chinensis
Ah.14g085390 Amaranthus hybridus
AL3G20750 Arabidopsis lyrata
Aqoxy6G00494 Aquilegia oxysepala
AT3G09580 Arabidopsis thaliana
ATR0580G200 Amborella trichopoda
Atru.chr6.902 Acer truncatum
AUR62027387 Chenopodium quinoa
AUR62031301 Chenopodium quinoa
BcaC05g29686 Brassica carinata
BolC5t34500H Brassica oleracea
BraA05t22728Z Brassica rapa
C05p58490 Brassica napus
CAN.G890.33 Capsicum annuum
CANSAT80G1420 Cannabis sativa
CARHR083990 Cardamine hirsuta
Carub.0003s0867 Capsella rubella
CBR_g49724 Chara braunii
Cc02_g21870 Coffea canephora
CDE06G0306 Ceratophyllum demersum
Cfa005577 Carpinus fangiana
Ciclev10004047m.g Citrus clementina
CiPaw.05G039000 Carya illinoinensis
ClCG10G015890 Citrullus lanatus
COL.COLO4_20870 Corchorus olitorius
Cpa.g.sc52.12 Carica papaya
Cre12.g560900 Chlamydomonas reinhardtii
CsaV3_3G040590 Cucumis sativus L.
CSS0020188 Camellia sinensis var. sinensis
Dinv19324 Davidia involucrata
Duzib052G0820 Durio zibethinus
ECA236G2671 Erigeron canadensis
EL10Ac8g19338 Beta vulgaris
Eucgr.I02693 Eucalyptus grandis
FAN11G3563 Fragaria x ananassa
FAN16G2899 Fragaria x ananassa
FAN21G2259 Fragaria x ananassa
FAN25G3421 Fragaria x ananassa
FvH4_3g40270 Fragaria vesca
Glyma.05G120300 Glycine max
Gohir.A04G112300 Gossypium hirsutum
Gohir.D04G153300 Gossypium hirsutum
Gorai.012G140200 Gossypium raimondii
GSVIVG01029706001 Vitis vinifera
HanXRQChr11g0337111 Helianthus annuus
HPP92_016846 Vanilla planifolia
Lalb_Chr07g0189441 Lupinus albus
Lj4g0025169 Lotus japonicus
Lj5P243T60 Lonicera japonica
Lsat_1_v5_gn_7_80180 Lactuca sativa
Manes.16G135300 Manihot esculenta
Mapoly0005s0009 Marchantia polymorpha
MBI05_g36588_MAGBIO Magnolia biondii
MBI05_g44826_MAGBIO Magnolia biondii
MBI05_g44827_MAGBIO Magnolia biondii
MCO04G135 Micromonas commoda
MD03G1054600 Malus domestica
Medtr4g094295 Medicago truncatula
MELO3C009790.2 Cucumis melo
Migut.B00640 Erythranthe guttata
MSTRG.16564 Avicennia marina
Nitab4.5_0002105g0030 Nicotiana tabacum
Nitab4.5_0007385g0020 Nicotiana tabacum
Nn1g05198 Nelumbo nucifera
Nn3g19797 Nelumbo nucifera
Oeu037200.1 Olea europaea
Os07g0626800 Oryza sativa ssp. japonica
Peaxi162Scf00328g00127 Petunia axillaris
PGR142G0984 Punica granatum
PGSC0003DMG400003660 Solanum tuberosum
Phvul.002G206500 Phaseolus vulgaris
Potri.001G344800 Populus trichocarpa
Pp3c2_19910 Physcomitrium patens
PRCOL_00005484 Prasinoderma coloniale
Prupe.6G043200 Prunus persica
Psat1g188000 Pisum sativum
PSO541G5651 Papaver somniferum
PSO675G7953 Papaver somniferum
QL11p019400 Quercus lobata
RcHm_v2.0_Chr5g0072531 Rosa chinensis
Rhsim05G0110900 Rhododendron simsii
Sabra16G0223900 Salix brachista
SalBow5G3411 Salvia bowleyana
Sc14g0002750 Simmondsia chinensis
Sed0000618 Sechium edule
SEGI_02418 Sequoiadendron giganteum
SGA_v2.0_scaffold332G48942 Striga asiatica
SMO116G0156 Selaginella moellendorffii
Solyc02g083410.4 Solanum lycopersicum
Sopen02g028190 Solanum pennellii
Sp3g07930 Schrenkiella parvula
TAR381G1585 Trochodendron aralioides
TAR381G1665 Trochodendron aralioides
THA.LOC104826997 Tarenaya hassleriana
Thecc.02G143600 Theobroma cacao
Thhalv10003042m.g Eutrema salsugineum
TPR.G10452 Trifolium pratense
TWI59G1034 Tripterygium wilfordii
unitig_8.g3470 Utricularia gibba
unitig_8.g3471 Utricularia gibba
VMungo0251G3312 Vigna mungo
Zm00001eb328010 Zea mays

User provided reference genes

Program Settings