Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15500 Brassica napus
Aa31LG7G4040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis
Actinidia29839 Actinidia chinensis
Actinidia38023 Actinidia chinensis
Ah.08g217460 Amaranthus hybridus
AL1G31930 Arabidopsis lyrata
Aqoxy5G01701 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea
AT1G19340 Arabidopsis thaliana
ATR0733G253 Amborella trichopoda
Atru.chr13.537 Acer truncatum
AUR62001387 Chenopodium quinoa
AUR62025603 Chenopodium quinoa
BcaB07g31960 Brassica carinata
BolC5t30479H Brassica oleracea
BraA06t24662Z Brassica rapa
C05p17740 Brassica napus
CAN.G1126.18 Capsicum annuum
CAN.G851.44 Capsicum annuum
CANSAT25G1057 Cannabis sativa
CARHR019930 Cardamine hirsuta
Carub.0001s1893 Capsella rubella
Ca_13340_v3 Cicer arietinum L.
CBR_g34449 Chara braunii
Cc10_g03320 Coffea canephora
CDE01G0194 Ceratophyllum demersum
CDE02G1565 Ceratophyllum demersum
Cfa018438 Carpinus fangiana
Cfa025491 Carpinus fangiana
Ciclev10001360m.g Citrus clementina
CiPaw.09G208600 Carya illinoinensis
ClCG08G015310 Citrullus lanatus
COL.COLO4_26368 Corchorus olitorius
Cpa.g.sc64.54 Carica papaya
CsaV3_2G028500 Cucumis sativus L.
CSS0000683 Camellia sinensis var. sinensis
CSS0043770 Camellia sinensis var. sinensis
DCAR_008774 Daucus carota
Duzib041G0709 Durio zibethinus
ECA232G0137 Erigeron canadensis
ECA246G5250 Erigeron canadensis
EL10Ac7g18245 Beta vulgaris
Eucgr.F01540 Eucalyptus grandis
FAN15G3100 Fragaria x ananassa
FAN20G0063 Fragaria x ananassa
FAN27G0845 Fragaria x ananassa
FvH4_2g40230 Fragaria vesca
Glyma.14G077000 Glycine max
Glyma.17G248801 Glycine max
Gohir.A06G011700 Gossypium hirsutum
Gohir.D06G009100 Gossypium hirsutum
Gorai.010G011900 Gossypium raimondii
GSVIVG01009652001 Vitis vinifera
HanXRQChr14g0437051 Helianthus annuus
Haze_17627 Corylus avellana
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla
HPP92_020401 Vanilla planifolia
Lalb_Chr14g0369091 Lupinus albus
Lj4A43T59 Lonicera japonica
Lj5g0009638 Lotus japonicus
Lsat_1_v5_gn_5_30021 Lactuca sativa
Manes.05G163100 Manihot esculenta
Mapoly0005s0290 Marchantia polymorpha
MBI16_g26378_MAGBIO Magnolia biondii
MD04G1062700 Malus domestica
Medtr1g021985 Medicago truncatula
MELO3C010924.2 Cucumis melo
Migut.N00515 Erythranthe guttata
MSTRG.22295 Avicennia marina
Nitab4.5_0000110g0230 Nicotiana tabacum
Nitab4.5_0005314g0050 Nicotiana tabacum
Nn1g05102 Nelumbo nucifera
Oeu015592.2 Olea europaea
Os03g0198900 Oryza sativa ssp. japonica
Peaxi162Scf00057g00723 Petunia axillaris
PGR083G0581 Punica granatum
PGSC0003DMG400027847 Solanum tuberosum
Phvul.001G016200 Phaseolus vulgaris
Potri.014G041400 Populus trichocarpa
Pp3c10_21330 Physcomitrium patens
Prupe.1G383100 Prunus persica
Psat6g006920 Pisum sativum
PSO170G0803 Papaver somniferum
PSO700G0257 Papaver somniferum
PSO832G2704 Papaver somniferum
QL02p007525 Quercus lobata
RcHm_v2.0_Chr6g0300531 Rosa chinensis
Rhsim07G0236000 Rhododendron simsii
Sabra14G0030300 Salix brachista
SalBow8G1187 Salvia bowleyana
SalBow8G1554 Salvia bowleyana
Sc02g0006440 Simmondsia chinensis
Sed0025576 Sechium edule
SEGI_08195 Sequoiadendron giganteum
SEGI_17198 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13513 Striga asiatica
SMO358G0064 Selaginella moellendorffii
Solyc04g079950.4 Solanum lycopersicum
Sopen04g033530 Solanum pennellii
Sp1g17250 Schrenkiella parvula
TAR381G0661 Trochodendron aralioides
THA.LOC104809053 Tarenaya hassleriana
Thecc.01G286100 Theobroma cacao
Thecc.08G022600 Theobroma cacao
Thhalv10007768m.g Eutrema salsugineum
TPR.G15730 Trifolium pratense
unitig_8.g3115 Utricularia gibba
vmacro04507 Vaccinium macrocarpon
VMungo0647G2017 Vigna mungo
Zm00001eb007930 Zea mays

User provided reference genes

Program Settings