Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p09600 Brassica napus
Aa31LG5G21360 Aethionema arabicum
Actinidia05428 Actinidia chinensis
Ah.02g130100 Amaranthus hybridus
AL4G32340 Arabidopsis lyrata
AL53U10010 Arabidopsis lyrata
Aqoxy2G01180 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3P0NFT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FQN2WV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IK7M5W Arachis hypogaea
AT2G36240 Arabidopsis thaliana
ATR0051G062 Amborella trichopoda
Atru.chr8.1533 Acer truncatum
AUR62005415 Chenopodium quinoa
AUR62014076 Chenopodium quinoa
BcaB02g09370 Brassica carinata
BcaB02g09371 Brassica carinata
BcaB02g09372 Brassica carinata
BcaC02g11726 Brassica carinata
BcaC02g11728 Brassica carinata
BcaC02g11731 Brassica carinata
BcaC02g11732 Brassica carinata
BolC4t22838H Brassica oleracea
BolC4t22892H Brassica oleracea
BraA05t19913Z Brassica rapa
C04p11900 Brassica napus
CAN.G137.42 Capsicum annuum
CAN.G2030.1 Capsicum annuum
CANSAT64G1568 Cannabis sativa
CARHR130480 Cardamine hirsuta
CARHR182760 Cardamine hirsuta
Carub.0004s1800 Capsella rubella
Ca_09007_v3 Cicer arietinum L.
Cc00_g27900 Coffea canephora
Cc02_g28460 Coffea canephora
Cfa016610 Carpinus fangiana
Ciclev10011570m.g Citrus clementina
CiPaw.09G014400 Carya illinoinensis
ClCG06G001250 Citrullus lanatus
COL.COLO4_29731 Corchorus olitorius
Cpa.g.sc166.4 Carica papaya
CsaV3_6G007180 Cucumis sativus L.
CSS0041599 Camellia sinensis var. sinensis
DCAR_013476 Daucus carota
Dinv21206 Davidia involucrata
Duzib106G0372 Durio zibethinus
ECA248G2176 Erigeron canadensis
EL10Ac6g13708 Beta vulgaris
Eucgr.G00971 Eucalyptus grandis
Eucgr.G00972 Eucalyptus grandis
Eucgr.G00976 Eucalyptus grandis
FAN02G3599 Fragaria x ananassa
FAN05G0477 Fragaria x ananassa
FAN05G0999 Fragaria x ananassa
FAN14G4048 Fragaria x ananassa
FvH4_6g18780 Fragaria vesca
Glyma.03G196000 Glycine max
Gorai.009G402600 Gossypium raimondii
GSVIVG01015930001 Vitis vinifera
GSVIVG01029738001 Vitis vinifera
HanXRQChr02g0032651 Helianthus annuus
Haze_19614 Corylus avellana
HPP92_011900 Vanilla planifolia
Lalb_Chr20g0111701 Lupinus albus
Lj1g0023344 Lotus japonicus
Lj2P137T25 Lonicera japonica
Lsat_1_v5_gn_5_164841 Lactuca sativa
Manes.07G071796 Manihot esculenta
Manes.09G055100 Manihot esculenta
Medtr7g104640 Medicago truncatula
MELO3C022409.2 Cucumis melo
Migut.J01034 Erythranthe guttata
MSTRG.19261 Avicennia marina
Nitab4.5_0000025g0100 Nicotiana tabacum
Nitab4.5_0003259g0020 Nicotiana tabacum
Nn6g34894 Nelumbo nucifera
Oeu029122.1 Olea europaea
Oeu056884.1 Olea europaea
Os01g0908800 Oryza sativa ssp. japonica
Peaxi162Scf00045g00156 Petunia axillaris
PGR142G3286 Punica granatum
PGSC0003DMG401009543 Solanum tuberosum
Phvul.001G190300 Phaseolus vulgaris
Potri.006G068700 Populus trichocarpa
Prupe.7G109800 Prunus persica
Psat3g033240 Pisum sativum
PSO541G2622 Papaver somniferum
PSO675G7214 Papaver somniferum
QL07p038724 Quercus lobata
QL07p038975 Quercus lobata
RcHm_v2.0_Chr3g0473791 Rosa chinensis
Rhsim03G0075000 Rhododendron simsii
Sabra06G0051200 Salix brachista
SalBow3G1904 Salvia bowleyana
Sc02g0000270 Simmondsia chinensis
Sed0006527 Sechium edule
SEGI_13947 Sequoiadendron giganteum
SEGI_40503 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06715 Striga asiatica
SGA_v2.0_scaffold32G13171 Striga asiatica
SHI12421 Sapria himalayana
Solyc08g006170.1 Solanum lycopersicum
Sopen08g002140 Solanum pennellii
Sp4g18460 Schrenkiella parvula
TAR633G1277 Trochodendron aralioides
THA.LOC104804920 Tarenaya hassleriana
Thecc.05G089500 Theobroma cacao
Thhalv10016603m.g Eutrema salsugineum
TPR.G19555 Trifolium pratense
TWI77G0642 Tripterygium wilfordii
VMungo1383G3509 Vigna mungo
Zm00001eb365120 Zea mays
Zm00001eb423490 Zea mays
Zm00001eb434610 Zea mays
Zm00001eb434620 Zea mays

User provided reference genes

Program Settings