Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p33840 Brassica napus
Aa31LG2G6790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis
Actinidia30174 Actinidia chinensis
Actinidia31918 Actinidia chinensis
AL5G13960 Arabidopsis lyrata
AL5G14010 Arabidopsis lyrata
Aqoxy5G01341 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea
AT3G25545 Arabidopsis thaliana
ATR0721G025 Amborella trichopoda
ATR0737G064 Amborella trichopoda
Atru.chr11.1459 Acer truncatum
Atru.chr11.1493 Acer truncatum
AUR62007823 Chenopodium quinoa
BcaB07g30269 Brassica carinata
BcaB07g30639 Brassica carinata
BcaC03g17267 Brassica carinata
BcaC03g17268 Brassica carinata
BcaC04g21430 Brassica carinata
BolC2t11296H Brassica oleracea
BraA02t08402Z Brassica rapa
BraA09t38070Z Brassica rapa
C02p52120 Brassica napus
C09p31840 Brassica napus
CAN.G184.17 Capsicum annuum
CANSAT64G2393 Cannabis sativa
CARHR146460 Cardamine hirsuta
Carub.0005s0328 Capsella rubella
Ca_05156_v3 Cicer arietinum L.
Cc11_g11200 Coffea canephora
Cfa009867 Carpinus fangiana
Ciclev10032464m.g Citrus clementina
CiPaw.06G096100 Carya illinoinensis
ClCG01G007410 Citrullus lanatus
COL.COLO4_27747 Corchorus olitorius
Cpa.g.sc53.10 Carica papaya
Cre01.g037650 Chlamydomonas reinhardtii
CsaV3_5G018880 Cucumis sativus L.
CSS0003455 Camellia sinensis var. sinensis
CSS0047872 Camellia sinensis var. sinensis
Duzib268G1722 Durio zibethinus
ECA233G2927 Erigeron canadensis
Eucgr.B03092 Eucalyptus grandis
FAN07G1226 Fragaria x ananassa
FAN12G0570 Fragaria x ananassa
FvH4_4g28700 Fragaria vesca
Glyma.01G070150 Glycine max
Glyma.02G127200 Glycine max
Gohir.A03G107900 Gossypium hirsutum
Gohir.D02G132900 Gossypium hirsutum
HanXRQChr08g0214781 Helianthus annuus
HanXRQChr12g0364531 Helianthus annuus
HanXRQChr15g0469081 Helianthus annuus
Haze_23238 Corylus avellana
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla
HPP92_020023 Vanilla planifolia
Hund25134 Selenicereus undatus
Lalb_Chr17g0341651 Lupinus albus
Lj6P771T55 Lonicera japonica
Lsat_1_v5_gn_8_37640 Lactuca sativa
Manes.06G077700 Manihot esculenta
Mapoly0008s0082 Marchantia polymorpha
MCO12G436 Micromonas commoda
MD13G1053100 Malus domestica
MD16G1052100 Malus domestica
Medtr5g049260 Medicago truncatula
Medtr5g049270 Medicago truncatula
MELO3C005171.2 Cucumis melo
Migut.L01132 Erythranthe guttata
MSTRG.7709 Avicennia marina
Nitab4.5_0000027g0460 Nicotiana tabacum
Nitab4.5_0010998g0020 Nicotiana tabacum
Nn7g37287 Nelumbo nucifera
Oeu024136.2 Olea europaea
Oeu054573.1 Olea europaea
Oeu054575.1 Olea europaea
Oeu054577.1 Olea europaea
Os01g0219000 Oryza sativa ssp. japonica
Os07g0669401 Oryza sativa ssp. japonica
Peaxi162Scf00188g00063 Petunia axillaris
PGR102G0342 Punica granatum
PGSC0003DMG400025119 Solanum tuberosum
Phvul.002G082000 Phaseolus vulgaris
Potri.008G110700 Populus trichocarpa
Potri.010G134600 Populus trichocarpa
Pp3c1_39830 Physcomitrium patens
Prupe.1G299000 Prunus persica
Psat2g098640 Pisum sativum
PSO478G3347 Papaver somniferum
PSO541G5551 Papaver somniferum
PSO675G5986 Papaver somniferum
QL03p047845 Quercus lobata
RcHm_v2.0_Chr4g0436821 Rosa chinensis
Rhsim09G0117300 Rhododendron simsii
Sabra10G0103400 Salix brachista
SalBow8G0220 Salvia bowleyana
SalBow8G1387 Salvia bowleyana
Sc11g0002760 Simmondsia chinensis
Sed0015072 Sechium edule
SEGI_13208 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07849 Striga asiatica
SHI15728 Sapria himalayana
SMO164G0046 Selaginella moellendorffii
Solyc05g010290.3 Solanum lycopersicum
Sopen05g006060 Solanum pennellii
Sp2g14810 Schrenkiella parvula
TAR624G1108 Trochodendron aralioides
THA.LOC104801842 Tarenaya hassleriana
Thecc.02G317700 Theobroma cacao
Thhalv10004778m.g Eutrema salsugineum
TWI31G0390 Tripterygium wilfordii
unitig_8.g3212 Utricularia gibba
VMungo1215G2951 Vigna mungo
Zm00001eb119820 Zea mays

User provided reference genes

Program Settings