Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36460 Brassica napus
A03p40470 Brassica napus
Aa31LG8G4820 Aethionema arabicum
AL3G31120 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea
AT3G17950 Arabidopsis thaliana
ATR0564G523 Amborella trichopoda
Atru.chr8.1727 Acer truncatum
Atru.chr9.1672 Acer truncatum
BcaB04g18974 Brassica carinata
BcaB04g20803 Brassica carinata
BcaC01g03720 Brassica carinata
BcaC09g48759 Brassica carinata
BolC1t04582H Brassica oleracea
BraA01t03709Z Brassica rapa
C01p46200 Brassica napus
C03p49310 Brassica napus
C05p26280 Brassica napus
CANSAT64G0030 Cannabis sativa
CANSAT80G0659 Cannabis sativa
CANSAT80G2635 Cannabis sativa
CARHR093280 Cardamine hirsuta
Carub.0003s1768 Capsella rubella
Ca_17183_v3 Cicer arietinum L.
Ca_25344_v3 Cicer arietinum L.
Cc04_g06140 Coffea canephora
CDE05G2986 Ceratophyllum demersum
CDE07G1050 Ceratophyllum demersum
Cfa021396 Carpinus fangiana
Ciclev10009814m.g Citrus clementina
CiPaw.15G144200 Carya illinoinensis
CiPaw.16G095900 Carya illinoinensis
ClCG04G010570 Citrullus lanatus
COL.COLO4_04996 Corchorus olitorius
Cpa.g.sc3.383 Carica papaya
CSS0048798 Camellia sinensis var. sinensis
DCAR_013026 Daucus carota
Dinv08202 Davidia involucrata
Duzib068G0617 Durio zibethinus
Duzib084G0148 Durio zibethinus
ECA248G0187 Erigeron canadensis
Eucgr.B00988 Eucalyptus grandis
FAN04G0930 Fragaria x ananassa
FAN08G0189 Fragaria x ananassa
FAN13G2800 Fragaria x ananassa
FAN18G3906 Fragaria x ananassa
FvH4_5g17460 Fragaria vesca
Glyma.07G103100 Glycine max
Glyma.08G055100 Glycine max
Glyma.09G174700 Glycine max
Gohir.A12G269600 Gossypium hirsutum
Gohir.D12G270100 Gossypium hirsutum
Gorai.008G290400 Gossypium raimondii
GSVIVG01008463001 Vitis vinifera
HanXRQChr01g0012541 Helianthus annuus
Haze_13383 Corylus avellana
Haze_18880 Corylus avellana
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla
HPP92_008000 Vanilla planifolia
Lalb_Chr16g0386961 Lupinus albus
Lalb_Chr22g0353521 Lupinus albus
Lj2g0023485 Lotus japonicus
Lj4g0014763 Lotus japonicus
Lsat_1_v5_gn_5_175480 Lactuca sativa
Manes.06G005000 Manihot esculenta
MBI19_g22477_MAGBIO Magnolia biondii
MD01G1007300 Malus domestica
MD06G1228000 Malus domestica
MD14G1237200 Malus domestica
Medtr6g069830 Medicago truncatula
MELO3C002138.2 Cucumis melo
Migut.D01320 Erythranthe guttata
Nitab4.5_0001264g0020 Nicotiana tabacum
Nitab4.5_0010223g0030 Nicotiana tabacum
Nn2g15270 Nelumbo nucifera
Nn4g24277 Nelumbo nucifera
Oeu004474.1 Olea europaea
Oeu046160.1 Olea europaea
Os02g0733400 Oryza sativa ssp. japonica
Os06g0256800 Oryza sativa ssp. japonica
Peaxi162Scf00314g00315 Petunia axillaris
PGR083G0475 Punica granatum
PGSC0003DMG400005675 Solanum tuberosum
Phvul.002G330800 Phaseolus vulgaris
Phvul.004G150000 Phaseolus vulgaris
Potri.012G045700 Populus trichocarpa
Potri.015G036900 Populus trichocarpa
Prupe.5G234500 Prunus persica
Psat1g031080 Pisum sativum
Psat4g000080 Pisum sativum
PSO210G4985 Papaver somniferum
PSO832G1236 Papaver somniferum
QL10p030576 Quercus lobata
RcHm_v2.0_Chr7g0178231 Rosa chinensis
Sabra12G0031800 Salix brachista
Sabra15G0031400 Salix brachista
SalBow1G0629 Salvia bowleyana
Sed0024550 Sechium edule
SGA_v2.0_scaffold172G39018 Striga asiatica
Solyc03g118630.3 Solanum lycopersicum
Sopen03g037580 Solanum pennellii
Sp3g16080 Schrenkiella parvula
TAR622G0128 Trochodendron aralioides
THA.LOC104825595 Tarenaya hassleriana
Thecc.03G058000 Theobroma cacao
Thhalv10021515m.g Eutrema salsugineum
TPR.G8635 Trifolium pratense
TWI81G0550 Tripterygium wilfordii
unitig_37.g12830 Utricularia gibba
vmacro16409 Vaccinium macrocarpon
VMungo0251G0268 Vigna mungo
VMungo0251G1205 Vigna mungo
VMungo0331G1645 Vigna mungo
VMungo0464G2014 Vigna mungo
Zm00001eb190230 Zea mays

User provided reference genes

Program Settings