Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p42040 Brassica napus
Aa31LG10G3230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.82 Anthoceros agrestis
Actinidia21647 Actinidia chinensis
Actinidia21877 Actinidia chinensis
Actinidia38801 Actinidia chinensis
AL1G59440 Arabidopsis lyrata
Aqoxy7G02833 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0A10RK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J9SV8Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q13VIF Arachis hypogaea
AT1G51550 Arabidopsis thaliana
ATR0626G164 Amborella trichopoda
Atru.chr1.2722 Acer truncatum
AUR62001351 Chenopodium quinoa
AUR62025653 Chenopodium quinoa
BcaB04g19143 Brassica carinata
BcaC01g03526 Brassica carinata
BolC3t17431H Brassica oleracea
BraA03t13358Z Brassica rapa
C03p51460 Brassica napus
CAN.G308.13 Capsicum annuum
CANSAT01G2036 Cannabis sativa
CANSAT01G2251 Cannabis sativa
CARHR041700 Cardamine hirsuta
Carub.0001s4040 Capsella rubella
Ca_20506_v3 Cicer arietinum L.
Cc00_g31150 Coffea canephora
Cc04_g00270 Coffea canephora
CDE05G2727 Ceratophyllum demersum
Cfa002144 Carpinus fangiana
Ciclev10025550m.g Citrus clementina
CiPaw.01G089600 Carya illinoinensis
CiPaw.02G049800 Carya illinoinensis
COL.COLO4_31179 Corchorus olitorius
Cpa.g.sc155.24 Carica papaya
Cpa.g.sc155.27 Carica papaya
Cre05.g238150 Chlamydomonas reinhardtii
CSS0040794 Camellia sinensis var. sinensis
DCAR_022616 Daucus carota
Dinv37786 Davidia involucrata
Duzib192G0692 Durio zibethinus
Duzib235G0500 Durio zibethinus
ECA232G1645 Erigeron canadensis
EL10Ac7g18171 Beta vulgaris
Eucgr.J03167 Eucalyptus grandis
FAN02G4457 Fragaria x ananassa
FAN05G0419 Fragaria x ananassa
FAN09G3862 Fragaria x ananassa
FAN14G0399 Fragaria x ananassa
FvH4_6g37110 Fragaria vesca
Glyma.07G020700 Glycine max
Glyma.08G221300 Glycine max
Gohir.A10G002800 Gossypium hirsutum
Gohir.D10G002800 Gossypium hirsutum
Gorai.011G003200 Gossypium raimondii
GSVIVG01029571001 Vitis vinifera
HanXRQChr09g0277411 Helianthus annuus
Haze_16280 Corylus avellana
Hma1.2p1_0517F.1_g170710 Hydrangea macrophylla
Hma1.2p1_1111F.1_g258360 Hydrangea macrophylla
HPP92_013420 Vanilla planifolia
Hund05679 Selenicereus undatus
Lalb_Chr04g0264621 Lupinus albus
Lalb_Chr25g0278701 Lupinus albus
Lj3g0014359 Lotus japonicus
Lj5A23G25 Lonicera japonica
Lsat_1_v5_gn_4_89221 Lactuca sativa
Manes.03G080200 Manihot esculenta
Manes.16G046700 Manihot esculenta
Mapoly0008s0154 Marchantia polymorpha
MBI16_g05830_MAGBIO Magnolia biondii
MCO14G568 Micromonas commoda
MD09G1161500 Malus domestica
MD17G1147400 Malus domestica
Medtr4g007980 Medicago truncatula
Migut.I01188 Erythranthe guttata
Nitab4.5_0002354g0030 Nicotiana tabacum
Nitab4.5_0003757g0050 Nicotiana tabacum
Nn8g40742 Nelumbo nucifera
Oeu001814.1 Olea europaea
Oeu031651.2 Olea europaea
Os08g0230300 Oryza sativa ssp. japonica
Peaxi162Scf00207g01622 Petunia axillaris
PGR031G3684 Punica granatum
PGSC0003DMG400026513 Solanum tuberosum
Phvul.008G254100 Phaseolus vulgaris
Potri.008G006300 Populus trichocarpa
Potri.010G252200 Populus trichocarpa
Pp3c16_19240 Physcomitrium patens
Pp3c25_6710 Physcomitrium patens
Prupe.3G020600 Prunus persica
Psat7g260560 Pisum sativum
PSO063G1692 Papaver somniferum
PSO170G3728 Papaver somniferum
QL05p083901 Quercus lobata
RcHm_v2.0_Chr2g0149671 Rosa chinensis
Rhsim08G0249400 Rhododendron simsii
Sabra08G0003300 Salix brachista
Sabra10G0196200 Salix brachista
Sc10g0008040 Simmondsia chinensis
Sed0000887 Sechium edule
SEGI_33193 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23997 Striga asiatica
SMO364G0723 Selaginella moellendorffii
Solyc06g063300.4 Solanum lycopersicum
Sopen06g022760 Solanum pennellii
Sp1g38200 Schrenkiella parvula
TAR383G0402 Trochodendron aralioides
TAR383G0567 Trochodendron aralioides
THA.LOC104816869 Tarenaya hassleriana
THA.LOC104817921 Tarenaya hassleriana
Thecc.06G059800 Theobroma cacao
Thhalv10011439m.g Eutrema salsugineum
TPR.G3330 Trifolium pratense
TWI12G0466 Tripterygium wilfordii
unitig_748.g8031 Utricularia gibba
vmacro18750 Vaccinium macrocarpon
VMungo0647G0463 Vigna mungo
Zm00001eb414270 Zea mays

User provided reference genes

Program Settings