Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05010 Brassica napus
A03p61850 Brassica napus
AL7G18390 Arabidopsis lyrata
Aqoxy3G03118 Aquilegia oxysepala
Aqoxy3G03119 Aquilegia oxysepala
Aqoxy7G00937 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JU4D9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FB4QQZ Arachis hypogaea
AT4G33160 Arabidopsis thaliana
ATR0099G062 Amborella trichopoda
Atru.chr7.1810 Acer truncatum
BcaC09g52123 Brassica carinata
BcaC09g52124 Brassica carinata
BcaC09g52125 Brassica carinata
BcaC09g52126 Brassica carinata
BcaC09g52128 Brassica carinata
BcaNung02156 Brassica carinata
BcaNung02157 Brassica carinata
BolC1t00526H Brassica oleracea
BolC7t46397H Brassica oleracea
BraA01t00483Z Brassica rapa
C01p05460 Brassica napus
C07p59530 Brassica napus
CAN.G1399.1 Capsicum annuum
CANSAT25G1574 Cannabis sativa
CARHR241190 Cardamine hirsuta
Carub.0007s0729 Capsella rubella
Ca_13084_v3 Cicer arietinum L.
Cc08_g07830 Coffea canephora
CDE01G0813 Ceratophyllum demersum
CDE05G2859 Ceratophyllum demersum
Cfa017844 Carpinus fangiana
Ciclev10010172m.g Citrus clementina
CiPaw.16G071700 Carya illinoinensis
ClCG05G015980 Citrullus lanatus
COL.COLO4_21174 Corchorus olitorius
Cpa.g.sc82.23 Carica papaya
CsaV3_4G036270 Cucumis sativus L.
Duzib150G0932 Durio zibethinus
Duzib168G1156 Durio zibethinus
Duzib187G1400 Durio zibethinus
Eucgr.C00751 Eucalyptus grandis
FAN20G2635 Fragaria x ananassa
FAN27G3353 Fragaria x ananassa
FvH4_2g37090 Fragaria vesca
Glyma.04G058200 Glycine max
Glyma.06G058900 Glycine max
Glyma.14G105800 Glycine max
Glyma.17G220600 Glycine max
Gohir.A05G037600 Gossypium hirsutum
Gohir.A13G188500 Gossypium hirsutum
Gohir.D05G039100 Gossypium hirsutum
Gohir.D13G195500 Gossypium hirsutum
Gorai.009G039600 Gossypium raimondii
Gorai.013G221600 Gossypium raimondii
GSVIVG01035605001 Vitis vinifera
Haze_18364 Corylus avellana
HPP92_002171 Vanilla planifolia
HPP92_028258 Vanilla planifolia
Lalb_Chr08g0244601 Lupinus albus
Lalb_Chr11g0063431 Lupinus albus
Lalb_Chr14g0375431 Lupinus albus
Lj1g0019769 Lotus japonicus
Lj5g0026617 Lotus japonicus
Manes.03G055400 Manihot esculenta
Manes.16G088100 Manihot esculenta
MBI19_g32871_MAGBIO Magnolia biondii
MD08G1047200 Malus domestica
MD15G1046700 Malus domestica
Medtr1g014700 Medicago truncatula
MELO3C016934.2 Cucumis melo
Migut.A00333 Erythranthe guttata
Nitab4.5_0000508g0110 Nicotiana tabacum
Nitab4.5_0006583g0010 Nicotiana tabacum
Nn6g35727 Nelumbo nucifera
Nn8g38521 Nelumbo nucifera
Oeu001617.1 Olea europaea
Oeu030215.1 Olea europaea
Oeu056544.1 Olea europaea
Oeu064235.1 Olea europaea
Os03g0399400 Oryza sativa ssp. japonica
Os07g0617700 Oryza sativa ssp. japonica
Peaxi162Scf00922g00001 Petunia axillaris
PGR142G2209 Punica granatum
PGSC0003DMG400007376 Solanum tuberosum
Phvul.001G043800 Phaseolus vulgaris
Phvul.009G084700 Phaseolus vulgaris
Potri.006G217500 Populus trichocarpa
Prupe.1G401100 Prunus persica
Psat6g024360 Pisum sativum
PSO104G0181 Papaver somniferum
PSO339G3229 Papaver somniferum
PSO339G5773 Papaver somniferum
PSO339G6418 Papaver somniferum
PSO384G3843 Papaver somniferum
PSO421G0401 Papaver somniferum
PSO541G4645 Papaver somniferum
PSO675G7206 Papaver somniferum
RcHm_v2.0_Chr6g0304701 Rosa chinensis
Sabra06G0167700 Salix brachista
SalBow4G3237 Salvia bowleyana
Sed0001226 Sechium edule
Sed0020634 Sechium edule
SEGI_32653 Sequoiadendron giganteum
SEGI_35890 Sequoiadendron giganteum
SGA_v2.0_scaffold22G09921 Striga asiatica
Solyc08g067300.1 Solanum lycopersicum
Sopen08g021230 Solanum pennellii
Sp7g30910 Schrenkiella parvula
TAR624G0126 Trochodendron aralioides
TAR624G0622 Trochodendron aralioides
TAR624G0963 Trochodendron aralioides
THA.LOC104803713 Tarenaya hassleriana
Thecc.09G066900 Theobroma cacao
Thhalv10025320m.g Eutrema salsugineum
TPR.G38916 Trifolium pratense
TWI32G1144 Tripterygium wilfordii
TWI34G1185 Tripterygium wilfordii
unitig_747.g21890 Utricularia gibba
unitig_747.g21891 Utricularia gibba
VMungo0251G1646 Vigna mungo
VMungo0647G0664 Vigna mungo
VMungo1309G0251 Vigna mungo
Zm00001eb109360 Zea mays

User provided reference genes

Program Settings