Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p10360 Brassica napus
A08p24240 Brassica napus
Aa31LG9G3240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis
Actinidia38857 Actinidia chinensis
Ah.08g217480 Amaranthus hybridus
AL7G42250 Arabidopsis lyrata
Aqoxy1G03181 Aquilegia oxysepala
Aqoxy1G03645 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea
AT4G14145 Arabidopsis thaliana
ATR0329G030 Amborella trichopoda
Atru.chr12.797 Acer truncatum
AUR62001381 Chenopodium quinoa
BcaB04g18121 Brassica carinata
BcaC01g00219 Brassica carinata
BcaC07g37722 Brassica carinata
BolC3t19959H Brassica oleracea
BolC8t48104H Brassica oleracea
BraA08t33036Z Brassica rapa
BraA08t34379Z Brassica rapa
CAN.G108.21 Capsicum annuum
CANSAT54G0886 Cannabis sativa
CARHR220160 Cardamine hirsuta
Carub.0007s2828 Capsella rubella
Ca_10561_v3 Cicer arietinum L.
Cc02_g11260 Coffea canephora
CDE03G0070 Ceratophyllum demersum
Cfa001656 Carpinus fangiana
Cfa001990 Carpinus fangiana
Ciclev10033053m.g Citrus clementina
CiPaw.01G271600 Carya illinoinensis
CiPaw.02G173400 Carya illinoinensis
CiPaw.16G031600 Carya illinoinensis
ClCG05G021080 Citrullus lanatus
COL.COLO4_28414 Corchorus olitorius
CsaV3_5G036210 Cucumis sativus L.
CSS0007064 Camellia sinensis var. sinensis
CSS0043670 Camellia sinensis var. sinensis
DCAR_016552 Daucus carota
Duzib114G0385 Durio zibethinus
Duzib128G0799 Durio zibethinus
ECA248G2014 Erigeron canadensis
EL10Ac7g17093 Beta vulgaris
EL10Ac7g18239 Beta vulgaris
Eucgr.J01081 Eucalyptus grandis
FAN03G1544 Fragaria x ananassa
FAN06G1284 Fragaria x ananassa
FAN06G3393 Fragaria x ananassa
FAN19G2294 Fragaria x ananassa
FvH4_7g19210 Fragaria vesca
Glyma.10G210100 Glycine max
Glyma.20G180500 Glycine max
Gohir.A06G167900 Gossypium hirsutum
Gohir.D06G175300 Gossypium hirsutum
Gorai.010G205700 Gossypium raimondii
GSVIVG01016260001 Vitis vinifera
HanXRQChr01g0023971 Helianthus annuus
HanXRQChr08g0229761 Helianthus annuus
Haze_16878 Corylus avellana
HPP92_011207 Vanilla planifolia
Hund05693 Selenicereus undatus
Lalb_Chr01g0009491 Lupinus albus
Lj5g0007819 Lotus japonicus
Lsat_1_v5_gn_1_77620 Lactuca sativa
Lsat_1_v5_gn_2_8120 Lactuca sativa
Manes.10G047101 Manihot esculenta
Mapoly0038s0090 Marchantia polymorpha
MBI07_g30981_MAGBIO Magnolia biondii
MBI07_g44648_MAGBIO Magnolia biondii
MD01G1107500 Malus domestica
Medtr1g094840 Medicago truncatula
Medtr1g094845 Medicago truncatula
MELO3C012421.2 Cucumis melo
Migut.D01650 Erythranthe guttata
Migut.F01979 Erythranthe guttata
MSTRG.27474 Avicennia marina
Nitab4.5_0000071g0090 Nicotiana tabacum
Nitab4.5_0005501g0010 Nicotiana tabacum
Nitab4.5_0006507g0010 Nicotiana tabacum
Nn2g10831 Nelumbo nucifera
Oeu014384.2 Olea europaea
Oeu042739.1 Olea europaea
Os03g0288400 Oryza sativa ssp. japonica
Peaxi162Scf00011g01839 Petunia axillaris
Peaxi162Scf00370g00117 Petunia axillaris
PGR044G2737 Punica granatum
PGSC0003DMG400009070 Solanum tuberosum
Phvul.007G095900 Phaseolus vulgaris
Potri.008G038500 Populus trichocarpa
Potri.010G223700 Populus trichocarpa
Pp3c5_20880 Physcomitrium patens
Prupe.2G212200 Prunus persica
Psat6g182760 Pisum sativum
PSO210G4078 Papaver somniferum
PSO832G3015 Papaver somniferum
QL08p055470 Quercus lobata
RcHm_v2.0_Chr1g0363061 Rosa chinensis
Rhsim03G0119300 Rhododendron simsii
Sabra10G0173000 Salix brachista
SalBow4G2149 Salvia bowleyana
Sc20g0001780 Simmondsia chinensis
Sed0026413 Sechium edule
Sed0026653 Sechium edule
SGA_v2.0_scaffold24G10658 Striga asiatica
SGA_v2.0_scaffold250G44987 Striga asiatica
SGA_v2.0_scaffold355G49780 Striga asiatica
SMO232G0066 Selaginella moellendorffii
SMO241G0021 Selaginella moellendorffii
Solyc03g007490.3 Solanum lycopersicum
Sopen03g003450 Solanum pennellii
Sp7g11980 Schrenkiella parvula
TAR369G0988 Trochodendron aralioides
TAR383G0772 Trochodendron aralioides
TAR623G1160 Trochodendron aralioides
THA.LOC104808680 Tarenaya hassleriana
Thecc.10G076000 Theobroma cacao
Thhalv10026557m.g Eutrema salsugineum
TPR.G1973 Trifolium pratense
TWI63G1140 Tripterygium wilfordii
unitig_37.g12308 Utricularia gibba
vmacro07063 Vaccinium macrocarpon
vmacro07064 Vaccinium macrocarpon
VMungo0720G0734 Vigna mungo
Zm00001eb062340 Zea mays

User provided reference genes

Program Settings