Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG5G12560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis
Actinidia01967 Actinidia chinensis
Actinidia01975 Actinidia chinensis
AL3G11200 Arabidopsis lyrata
Aqoxy3G00406 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea
AT3G01060 Arabidopsis thaliana
ATR0111G015 Amborella trichopoda
Atru.chr8.386 Acer truncatum
AUR62018147 Chenopodium quinoa
AUR62018149 Chenopodium quinoa
AUR62042562 Chenopodium quinoa
BcaC09g47681 Brassica carinata
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus
BolC1t05923H Brassica oleracea
BraA01t04634Z Brassica rapa
CAN.G734.6 Capsicum annuum
CANSAT64G2728 Cannabis sativa
CARHR076010 Cardamine hirsuta
Carub.0003s0111 Capsella rubella
Ca_04868_v3 Cicer arietinum L.
CBR_g61504 Chara braunii
Cc07_g03890 Coffea canephora
Cc07_g03900 Coffea canephora
CDE04G1831 Ceratophyllum demersum
CDE07G0145 Ceratophyllum demersum
CDE07G2056 Ceratophyllum demersum
Cfa007624 Carpinus fangiana
Ciclev10011697m.g Citrus clementina
CiPaw.04G058500 Carya illinoinensis
ClCG11G004630 Citrullus lanatus
COL.COLO4_21375 Corchorus olitorius
Cpa.g.sc14.144 Carica papaya
Cre13.g562750 Chlamydomonas reinhardtii
CsaV3_5G038400 Cucumis sativus L.
CSS0003743 Camellia sinensis var. sinensis
CSS0005506 Camellia sinensis var. sinensis
DCAR_005553 Daucus carota
Dinv11487 Davidia involucrata
Dinv33810 Davidia involucrata
Duzib147G1008 Durio zibethinus
ECA238G1943 Erigeron canadensis
EL10Ac2g03055 Beta vulgaris
EL10Ac2g03064 Beta vulgaris
Eucgr.I01985 Eucalyptus grandis
FAN02G1813 Fragaria x ananassa
FAN05G2671 Fragaria x ananassa
FAN09G3416 Fragaria x ananassa
FAN14G4646 Fragaria x ananassa
FvH4_6g47510 Fragaria vesca
Glyma.13G059000 Glycine max
Glyma.19G027400 Glycine max
Gohir.A11G071600 Gossypium hirsutum
Gohir.D11G075600 Gossypium hirsutum
Gorai.007G081300 Gossypium raimondii
GSVIVG01011490001 Vitis vinifera
HanXRQChr14g0448721 Helianthus annuus
Haze_14472 Corylus avellana
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla
HPP92_018459 Vanilla planifolia
Lalb_Chr06g0175111 Lupinus albus
Lj2g0023614 Lotus japonicus
Lj4C116G4 Lonicera japonica
Lsat_1_v5_gn_2_87860 Lactuca sativa
Manes.01G099100 Manihot esculenta
Mapoly0015s0039 Marchantia polymorpha
MBI16_g15532_MAGBIO Magnolia biondii
MCO03G230 Micromonas commoda
MCO05G128 Micromonas commoda
MCO08G023 Micromonas commoda
MCO08G069 Micromonas commoda
MCO08G121 Micromonas commoda
MD09G1061200 Malus domestica
MD09G1061300 Malus domestica
MD17G1056600 Malus domestica
Medtr6g013750 Medicago truncatula
MELO3C022021.2 Cucumis melo
Migut.H00653 Erythranthe guttata
MSTRG.3021 Avicennia marina
Nitab4.5_0001637g0110 Nicotiana tabacum
Nitab4.5_0005196g0010 Nicotiana tabacum
Nn4g23343 Nelumbo nucifera
Oeu000854.1 Olea europaea
Oeu061493.1 Olea europaea
Os05g0512200 Oryza sativa ssp. japonica
Peaxi162Scf00451g00429 Petunia axillaris
PGR004G2687 Punica granatum
PGSC0003DMG400033541 Solanum tuberosum
Phvul.004G033300 Phaseolus vulgaris
Potri.004G125301 Populus trichocarpa
Potri.017G090100 Populus trichocarpa
Pp3c2_13280 Physcomitrium patens
PRCOL_00002980 Prasinoderma coloniale
PRCOL_00003347 Prasinoderma coloniale
PRCOL_00004151 Prasinoderma coloniale
Prupe.3G258900 Prunus persica
Psat1g068640 Pisum sativum
PSO013G0364 Papaver somniferum
PSO421G0059 Papaver somniferum
QL02p039477 Quercus lobata
QL02p039732 Quercus lobata
RcHm_v2.0_Chr2g0166541 Rosa chinensis
Rhsim10G0046600 Rhododendron simsii
Rhsim10G0047200 Rhododendron simsii
Sabra17G0079200 Salix brachista
SalBow1G6551 Salvia bowleyana
Sc10g0003290 Simmondsia chinensis
Sed0006667 Sechium edule
SEGI_05647 Sequoiadendron giganteum
SMO335G0027 Selaginella moellendorffii
Solyc03g013240.4 Solanum lycopersicum
Sopen03g016610 Solanum pennellii
Sp3g01070 Schrenkiella parvula
TAR371G0518 Trochodendron aralioides
TAR627G0454 Trochodendron aralioides
THA.LOC104802965 Tarenaya hassleriana
Thecc.04G090800 Theobroma cacao
Thhalv10020707m.g Eutrema salsugineum
TPR.G22619 Trifolium pratense
TPR.G26197 Trifolium pratense
TWI60G0302 Tripterygium wilfordii
unitig_736.g22244 Utricularia gibba
vmacro05665 Vaccinium macrocarpon
VMungo0464G0831 Vigna mungo
Zm00001eb030310 Zea mays
Zm00001eb250570 Zea mays
Zm00001eb292620 Zea mays

User provided reference genes

Program Settings