Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p05520 Brassica napus
A01p05780 Brassica napus
Aa31sc91G60 Aethionema arabicum
Actinidia06678 Actinidia chinensis
AL7G19160 Arabidopsis lyrata
Aqoxy1G00613 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.884D9P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AJNI4B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G6ZNRX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V9EI6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VD7X19 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WENH69 Arachis hypogaea
AT4G32605 Arabidopsis thaliana
ATR1127G050 Amborella trichopoda
Atru.chr12.1089 Acer truncatum
AUR62011207 Chenopodium quinoa
AUR62013280 Chenopodium quinoa
BcaB05g22897 Brassica carinata
BcaC01g01011 Brassica carinata
BcaC09g52051 Brassica carinata
BolC1t00610H Brassica oleracea
BolC1t00611H Brassica oleracea
BolC1t00631H Brassica oleracea
BolC3t21025H Brassica oleracea
BraA01t00524Z Brassica rapa
BraA01t00547Z Brassica rapa
C01p06130 Brassica napus
C01p06350 Brassica napus
C03p87240 Brassica napus
CAN.G143.55 Capsicum annuum
CANSAT56G3685 Cannabis sativa
CARHR240580 Cardamine hirsuta
Carub.0007s0794 Capsella rubella
Ca_06327_v3 Cicer arietinum L.
Ca_30698_v3 Cicer arietinum L.
Cc02_g09270 Coffea canephora
CDE10G0808 Ceratophyllum demersum
Cfa004262 Carpinus fangiana
Ciclev10016560m.g Citrus clementina
CiPaw.13G045200 Carya illinoinensis
ClCG05G000560 Citrullus lanatus
ClCG05G000570 Citrullus lanatus
ClCG08G008440 Citrullus lanatus
COL.COLO4_37594 Corchorus olitorius
Cpa.g.sc33.126 Carica papaya
CsaV3_6G004430 Cucumis sativus L.
CSS0009115 Camellia sinensis var. sinensis
CSS0019543 Camellia sinensis var. sinensis
CSS0026439 Camellia sinensis var. sinensis
CSS0035441 Camellia sinensis var. sinensis
DCAR_025632 Daucus carota
Dinv03810 Davidia involucrata
Dinv04428 Davidia involucrata
Duzib205G1746 Durio zibethinus
ECA238G0088 Erigeron canadensis
EL10Ac4g08740 Beta vulgaris
Eucgr.G02665 Eucalyptus grandis
FAN01G0807 Fragaria x ananassa
FAN01G1003 Fragaria x ananassa
FAN03G3046 Fragaria x ananassa
FAN10G0591 Fragaria x ananassa
FAN10G3562 Fragaria x ananassa
FvH4_7g05420 Fragaria vesca
FvH4_7g05470 Fragaria vesca
Glyma.02G291900 Glycine max
Glyma.14G022800 Glycine max
Gohir.A03G069600 Gossypium hirsutum
Gohir.D03G096100 Gossypium hirsutum
Gorai.003G100800 Gossypium raimondii
GSVIVG01034602001 Vitis vinifera
HanXRQChr07g0186821 Helianthus annuus
HanXRQChr07g0194431 Helianthus annuus
HanXRQChr14g0455521 Helianthus annuus
Hma1.2p1_0098F.1_g048230 Hydrangea macrophylla
HPP92_013285 Vanilla planifolia
HPP92_013299 Vanilla planifolia
Hund07230 Selenicereus undatus
Lalb_Chr04g0248371 Lupinus albus
Lj3A921T39 Lonicera japonica
Lj3A922T58 Lonicera japonica
LjContig00272g0011155 Lotus japonicus
Lsat_1_v5_gn_2_106281 Lactuca sativa
Manes.10G059400 Manihot esculenta
MBI11_g01323_MAGBIO Magnolia biondii
MBI11_g46414_MAGBIO Magnolia biondii
MD02G1258000 Malus domestica
Medtr5g093000 Medicago truncatula
MELO3C019914.2 Cucumis melo
Migut.F00830 Erythranthe guttata
MSTRG.9023 Avicennia marina
Nitab4.5_0001781g0100 Nicotiana tabacum
Nitab4.5_0011494g0010 Nicotiana tabacum
Nn2g14223 Nelumbo nucifera
Nn6g34619 Nelumbo nucifera
Nn7g36032 Nelumbo nucifera
Oeu025604.1 Olea europaea
Os01g0771100 Oryza sativa ssp. japonica
Peaxi162Scf00120g00720 Petunia axillaris
PGR142G2015 Punica granatum
PGSC0003DMG400000991 Solanum tuberosum
Phvul.008G268400 Phaseolus vulgaris
Potri.008G015600 Populus trichocarpa
Potri.010G244500 Populus trichocarpa
Prupe.2G074600 Prunus persica
Psat2g011680 Pisum sativum
Psat6g052440 Pisum sativum
PSO339G0105 Papaver somniferum
PSO384G2277 Papaver somniferum
QL04p048796 Quercus lobata
RcHm_v2.0_Chr1g0332231 Rosa chinensis
Rhsim03G0094200 Rhododendron simsii
Sabra08G0009500 Salix brachista
Sabra10G0191000 Salix brachista
SalBow3G3384 Salvia bowleyana
Sc09g0004780 Simmondsia chinensis
Sed0002183 Sechium edule
SEGI_05706 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06426 Striga asiatica
SHI21255 Sapria himalayana
Solyc11g006400.2 Solanum lycopersicum
Sopen11g002300 Solanum pennellii
Sp7g30380 Schrenkiella parvula
TAR623G1656 Trochodendron aralioides
THA.LOC104803777 Tarenaya hassleriana
Thecc.03G100000 Theobroma cacao
Thhalv10026176m.g Eutrema salsugineum
TPR.G1192 Trifolium pratense
TWI63G1702 Tripterygium wilfordii
unitig_46.g18648 Utricularia gibba
vmacro07275 Vaccinium macrocarpon
VMungo0251G2551 Vigna mungo
VMungo0647G0838 Vigna mungo
Zm00001eb151940 Zea mays

User provided reference genes

Program Settings