Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16480 Brassica napus
A07p15690 Brassica napus
A07p15700 Brassica napus
A07p15800 Brassica napus
Aa31LG7G4730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1484 Anthoceros agrestis
Actinidia29777 Actinidia chinensis
Actinidia37960 Actinidia chinensis
Ah.00g000500 Amaranthus hybridus
AL1G33260 Arabidopsis lyrata
AL1G33330 Arabidopsis lyrata
Aqoxy6G01868 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea
AT1G20410 Arabidopsis thaliana
ATR0665G248 Amborella trichopoda
Atru.chr13.184 Acer truncatum
AUR62013839 Chenopodium quinoa
AUR62036767 Chenopodium quinoa
BcaB03g14322 Brassica carinata
BcaB03g14323 Brassica carinata
BcaB07g32044 Brassica carinata
BcaC05g25951 Brassica carinata
BcaC07g42576 Brassica carinata
BcaNung03380 Brassica carinata
BolC5t30602H Brassica oleracea
BolC7t42845H Brassica oleracea
BraA06t24751Z Brassica rapa
BraA07t29307Z Brassica rapa
C05p19010 Brassica napus
C07p23040 Brassica napus
CAN.G311.92 Capsicum annuum
CANSAT56G1424 Cannabis sativa
CARHR020860 Cardamine hirsuta
Carub.0001s1989 Capsella rubella
Ca_13490_v3 Cicer arietinum L.
CBR_g81579 Chara braunii
Cc10_g00980 Coffea canephora
CDE02G0067 Ceratophyllum demersum
Cfa014029 Carpinus fangiana
Ciclev10000742m.g Citrus clementina
CiPaw.07G141800 Carya illinoinensis
ClCG05G015260 Citrullus lanatus
COL.COLO4_26054 Corchorus olitorius
Cpa.g.sc26.237 Carica papaya
Cpa.g.sc26.238 Carica papaya
Cpa.g.sc26.239 Carica papaya
Cre12.g506900 Chlamydomonas reinhardtii
CsaV3_4G037060 Cucumis sativus L.
CSS0021595 Camellia sinensis var. sinensis
DCAR_013898 Daucus carota
Dinv31911 Davidia involucrata
Duzib093G0711 Durio zibethinus
ECA238G0937 Erigeron canadensis
EL10Ac1g02030 Beta vulgaris
Eucgr.F03532 Eucalyptus grandis
FAN15G0850 Fragaria x ananassa
FAN20G0402 Fragaria x ananassa
FAN27G0680 Fragaria x ananassa
FvH4_2g37810 Fragaria vesca
Glyma.14G222900 Glycine max
Gohir.A05G181600 Gossypium hirsutum
Gohir.D05G184600 Gossypium hirsutum
Gorai.009G190100 Gossypium raimondii
GSVIVG01008710001 Vitis vinifera
HanXRQChr14g0428991 Helianthus annuus
Haze_22735 Corylus avellana
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla
HPP92_014547 Vanilla planifolia
Hund05136 Selenicereus undatus
Lalb_Chr03g0033591 Lupinus albus
Lj2A91G56 Lonicera japonica
Lj4A15G44 Lonicera japonica
Lj5g0011422 Lotus japonicus
Lsat_1_v5_gn_2_5921 Lactuca sativa
Manes.18G007801 Manihot esculenta
Mapoly0006s0010 Marchantia polymorpha
MCO16G112 Micromonas commoda
MD08G1005300 Malus domestica
MD15G1004600 Malus domestica
MD15G1004800 Malus domestica
Medtr1g026400 Medicago truncatula
MELO3C017004.2 Cucumis melo
MELO3C031410.2 Cucumis melo
MELO3C032646.2 Cucumis melo
MELO3C035121.2 Cucumis melo
MELO3C035627.2 Cucumis melo
Migut.N03192 Erythranthe guttata
MSTRG.1133 Avicennia marina
Nitab4.5_0000588g0310 Nicotiana tabacum
Nn5g30889 Nelumbo nucifera
Oeu025004.1 Olea europaea
Os04g0561700 Oryza sativa ssp. japonica
Peaxi162Scf00174g01413 Petunia axillaris
PGR031G3425 Punica granatum
PGSC0003DMG400009964 Solanum tuberosum
Phvul.001G001600 Phaseolus vulgaris
Potri.005G247500 Populus trichocarpa
Pp3c20_10980 Physcomitrium patens
PRCOL_00003715 Prasinoderma coloniale
Prupe.1G357400 Prunus persica
Psat0s4771g0080 Pisum sativum
PSO541G4963 Papaver somniferum
PSO675G0073 Papaver somniferum
QL02p013522 Quercus lobata
RcHm_v2.0_Chr6g0303901 Rosa chinensis
Rhsim07G0252700 Rhododendron simsii
Rhsim11G0079600 Rhododendron simsii
Sabra05G0191400 Salix brachista
SalBow6G0433 Salvia bowleyana
Sc15g0004650 Simmondsia chinensis
Sed0014892 Sechium edule
SEGI_13350 Sequoiadendron giganteum
SEGI_14934 Sequoiadendron giganteum
SGA_v2.0_scaffold25G11198 Striga asiatica
SHI04100 Sapria himalayana
SHI04101 Sapria himalayana
SMO364G0210 Selaginella moellendorffii
Solyc04g082130.4 Solanum lycopersicum
Sopen04g035760 Solanum pennellii
Sp1g18130 Schrenkiella parvula
TAR381G0423 Trochodendron aralioides
THA.LOC104813767 Tarenaya hassleriana
Thecc.08G054600 Theobroma cacao
Thhalv10007426m.g Eutrema salsugineum
TWI36G0296 Tripterygium wilfordii
unitig_747.g21718 Utricularia gibba
vmacro04388 Vaccinium macrocarpon
VMungo0647G1107 Vigna mungo
Zm00001eb074060 Zea mays

User provided reference genes

Program Settings