Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p35290 Brassica napus
A09p06480 Brassica napus
Aa31LG11G3710 Aethionema arabicum
Actinidia08699 Actinidia chinensis
Actinidia34271 Actinidia chinensis
Ah.13g070770 Amaranthus hybridus
AL6G36040 Arabidopsis lyrata
Aqoxy6G02459 Aquilegia oxysepala
Aqoxy6G02489 Aquilegia oxysepala
AT5G24460 Arabidopsis thaliana
ATR0661G235 Amborella trichopoda
Atru.chr12.2435 Acer truncatum
AUR62005991 Chenopodium quinoa
AUR62028079 Chenopodium quinoa
BcaB04g19819 Brassica carinata
BcaB04g19821 Brassica carinata
BcaB04g19822 Brassica carinata
BcaC04g23543 Brassica carinata
BcaNung01236 Brassica carinata
BcaNung02020 Brassica carinata
BolC7t44847H Brassica oleracea
BolC9t53635H Brassica oleracea
BraA06t26455Z Brassica rapa
BraA09t36291Z Brassica rapa
C07p43220 Brassica napus
C09p07230 Brassica napus
CAN.G2.4 Capsicum annuum
CAN.G303.23 Capsicum annuum
CANSAT21G1965 Cannabis sativa
CARHR188950 Cardamine hirsuta
Carub.0006s2229 Capsella rubella
Ca_16781_v3 Cicer arietinum L.
CBR_g20004 Chara braunii
Cc02_g00800 Coffea canephora
Cc11_g13290 Coffea canephora
CDE04G1956 Ceratophyllum demersum
CDE12G0905 Ceratophyllum demersum
Ciclev10021557m.g Citrus clementina
CiPaw.06G041000 Carya illinoinensis
ClCG01G000060 Citrullus lanatus
COL.COLO4_12096 Corchorus olitorius
COL.COLO4_14373 Corchorus olitorius
COL.COLO4_35601 Corchorus olitorius
COL.COLO4_35602 Corchorus olitorius
Cpa.g.sc3.150 Carica papaya
Cre01.g012300 Chlamydomonas reinhardtii
CsaV3_5G000100 Cucumis sativus L.
CSS0020402 Camellia sinensis var. sinensis
DCAR_008987 Daucus carota
Dinv35383 Davidia involucrata
Duzib084G0063 Durio zibethinus
Duzib114G0266 Durio zibethinus
ECA232G4892 Erigeron canadensis
EL10Ac3g05171 Beta vulgaris
FAN01G0139 Fragaria x ananassa
FAN03G2485 Fragaria x ananassa
FAN10G0422 Fragaria x ananassa
FAN10G3655 Fragaria x ananassa
FvH4_7g32940 Fragaria vesca
Glyma.04G228100 Glycine max
Glyma.06G136800 Glycine max
Gohir.A08G104700 Gossypium hirsutum
Gohir.A11G016700 Gossypium hirsutum
Gohir.D08G116401 Gossypium hirsutum
Gohir.D11G016500 Gossypium hirsutum
Gorai.004G125300 Gossypium raimondii
Gorai.007G017300 Gossypium raimondii
HanXRQChr10g0305331 Helianthus annuus
Haze_00300 Corylus avellana
Hma1.2p1_0094F.1_g047400 Hydrangea macrophylla
HPP92_022381 Vanilla planifolia
Lalb_Chr08g0239571 Lupinus albus
Lalb_Chr23g0271941 Lupinus albus
Lj1g0001826 Lotus japonicus
Lj3P895T18 Lonicera japonica
Lsat_1_v5_gn_2_135020 Lactuca sativa
Lsat_1_v5_gn_9_49980 Lactuca sativa
Manes.01G043400 Manihot esculenta
Mapoly0031s0111 Marchantia polymorpha
MBI12_g45814_MAGBIO Magnolia biondii
MCO06G087 Micromonas commoda
MD01G1228500 Malus domestica
MD07G1299300 Malus domestica
Medtr3g092810 Medicago truncatula
MELO3C005919.2 Cucumis melo
Migut.F00150 Erythranthe guttata
MSTRG.26975 Avicennia marina
MSTRG.8611 Avicennia marina
Nitab4.5_0000319g0020 Nicotiana tabacum
Nitab4.5_0010809g0010 Nicotiana tabacum
Nn3g18788 Nelumbo nucifera
Oeu023690.1 Olea europaea
Oeu055391.1 Olea europaea
Os06g0712200 Oryza sativa ssp. japonica
Peaxi162Scf00912g10012 Petunia axillaris
PGR042G3207 Punica granatum
PGSC0003DMG400000562 Solanum tuberosum
Phvul.009G044800 Phaseolus vulgaris
Potri.010G149800 Populus trichocarpa
Potri.015G002500 Populus trichocarpa
Pp3c3_29470 Physcomitrium patens
Prupe.2G319100 Prunus persica
Psat5g071840 Pisum sativum
PSO063G5360 Papaver somniferum
PSO782G2283 Papaver somniferum
QL09p007163 Quercus lobata
RcHm_v2.0_Chr1g0382901 Rosa chinensis
Rhsim03G0215700 Rhododendron simsii
Sabra15G0001600 Salix brachista
SalBow6G2140 Salvia bowleyana
SalBow6G2506 Salvia bowleyana
Sc19g0000580 Simmondsia chinensis
Sed0003210 Sechium edule
Sed0025728 Sechium edule
SEGI_38224 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08468 Striga asiatica
SHI02291 Sapria himalayana
SMO140G0013 Selaginella moellendorffii
Solyc03g081220.1 Solanum lycopersicum
Sopen03g021950 Solanum pennellii
Sp2g22870 Schrenkiella parvula
TAR375G0732 Trochodendron aralioides
THA.LOC104798983 Tarenaya hassleriana
Thecc.03G209000 Theobroma cacao
Thhalv10005309m.g Eutrema salsugineum
TPR.G33360 Trifolium pratense
TWI14G0550 Tripterygium wilfordii
unitig_0.g2444 Utricularia gibba
unitig_37.g11995 Utricularia gibba
unitig_92.g28240 Utricularia gibba
vmacro06444 Vaccinium macrocarpon
vmacro22785 Vaccinium macrocarpon
VMungo1309G2416 Vigna mungo
Zm00001eb272540 Zea mays

User provided reference genes

Program Settings