Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18930 Brassica napus
A05p27070 Brassica napus
A07p29590 Brassica napus
Aa31LG4G4200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis
Actinidia06971 Actinidia chinensis
Actinidia24460 Actinidia chinensis
Ah.11g045030 Amaranthus hybridus
AL2G33720 Arabidopsis lyrata
Aqoxy3G00323 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea
AT1G73885 Arabidopsis thaliana
ATR0665G268 Amborella trichopoda
Atru.chr9.821 Acer truncatum
AUR62025855 Chenopodium quinoa
AUR62029856 Chenopodium quinoa
BcaB03g15734 Brassica carinata
BcaB05g24816 Brassica carinata
BcaB05g24818 Brassica carinata
BcaC03g15466 Brassica carinata
BcaC03g15467 Brassica carinata
BcaC08g45615 Brassica carinata
BcaC09g48855 Brassica carinata
BolC1t04492H Brassica oleracea
BolC2t09178H Brassica oleracea
BolC6t38490H Brassica oleracea
BraA02t06935Z Brassica rapa
BraA07t30600Z Brassica rapa
C01p45190 Brassica napus
C02p31470 Brassica napus
C06p33760 Brassica napus
CAN.G423.7 Capsicum annuum
CANSAT21G0600 Cannabis sativa
CARHR067000 Cardamine hirsuta
Carub.0002s2066 Capsella rubella
Ca_00264_v3 Cicer arietinum L.
Ca_25501_v3 Cicer arietinum L.
Ca_25502_v3 Cicer arietinum L.
CBR_g29305 Chara braunii
Cc04_g07210 Coffea canephora
CDE05G0659 Ceratophyllum demersum
CDE11G0392 Ceratophyllum demersum
Cfa019789 Carpinus fangiana
Ciclev10022208m.g Citrus clementina
CiPaw.15G129500 Carya illinoinensis
ClCG06G014890 Citrullus lanatus
COL.COLO4_04672 Corchorus olitorius
Cpa.g.sc13.3 Carica papaya
CsaV3_1G003750 Cucumis sativus L.
CSS0021100 Camellia sinensis var. sinensis
DCAR_023199 Daucus carota
Dinv36156 Davidia involucrata
Duzib068G0473 Durio zibethinus
Duzib084G1006 Durio zibethinus
ECA234G2972 Erigeron canadensis
EL10Ac5g11432 Beta vulgaris
Eucgr.K02215 Eucalyptus grandis
FAN04G2288 Fragaria x ananassa
FAN08G3097 Fragaria x ananassa
FAN13G0492 Fragaria x ananassa
FAN14G0369 Fragaria x ananassa
FAN18G2130 Fragaria x ananassa
FAN18G3094 Fragaria x ananassa
FvH4_5g12290 Fragaria vesca
Glyma.07G090700 Glycine max
Glyma.09G185251 Glycine max
Glyma.09G185300 Glycine max
Gohir.A08G094610 Gossypium hirsutum
Gohir.A09G177500 Gossypium hirsutum
Gohir.D09G173000 Gossypium hirsutum
Gorai.006G194900 Gossypium raimondii
GSVIVG01008273001 Vitis vinifera
HanXRQChr10g0314971 Helianthus annuus
Haze_18659 Corylus avellana
HPP92_013214 Vanilla planifolia
HPP92_013263 Vanilla planifolia
Hund02393 Selenicereus undatus
Lalb_Chr14g0371231 Lupinus albus
Lj2g0004175 Lotus japonicus
Lsat_1_v5_gn_8_146520 Lactuca sativa
Manes.01G012500 Manihot esculenta
Manes.05G145805 Manihot esculenta
Mapoly0028s0124 Marchantia polymorpha
MD06G1215200 Malus domestica
MD14G1226000 Malus domestica
Medtr6g084620 Medicago truncatula
MELO3C017300.2 Cucumis melo
Migut.I00369 Erythranthe guttata
MSTRG.11323 Avicennia marina
Nitab4.5_0010801g0020 Nicotiana tabacum
Nitab4.5_0011561g0030 Nicotiana tabacum
Nn1g06955 Nelumbo nucifera
Nn3g17806 Nelumbo nucifera
Oeu006380.1 Olea europaea
Oeu046995.1 Olea europaea
Os03g0585900 Oryza sativa ssp. japonica
Os03g0710600 Oryza sativa ssp. japonica
Peaxi162Scf00013g00945 Petunia axillaris
PGR083G1885 Punica granatum
PGSC0003DMG400004051 Solanum tuberosum
Phvul.004G158500 Phaseolus vulgaris
Potri.015G053800 Populus trichocarpa
Potri.015G054100 Populus trichocarpa
Pp3c4_12650 Physcomitrium patens
Pp3c4_12780 Physcomitrium patens
Prupe.5G220500 Prunus persica
PSO017G1947 Papaver somniferum
PSO478G3740 Papaver somniferum
QL10p025073 Quercus lobata
RcHm_v2.0_Chr7g0185261 Rosa chinensis
Rhsim13G0208500 Rhododendron simsii
Sabra15G0075500 Salix brachista
Sc12g0006790 Simmondsia chinensis
Sed0000228 Sechium edule
SEGI_06072 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10988 Striga asiatica
SMO232G0029 Selaginella moellendorffii
SMO241G0040 Selaginella moellendorffii
Solyc06g069170.4 Solanum lycopersicum
Sopen06g026440 Solanum pennellii
Sp5g29090 Schrenkiella parvula
TAR629G3023 Trochodendron aralioides
THA.LOC104813291 Tarenaya hassleriana
THA.LOC104813901 Tarenaya hassleriana
Thecc.03G033800 Theobroma cacao
Thhalv10019131m.g Eutrema salsugineum
TPR.G35237 Trifolium pratense
TWI15G0782 Tripterygium wilfordii
unitig_749.g13417 Utricularia gibba
vmacro04041 Vaccinium macrocarpon
Zm00001eb054790 Zea mays
Zm00001eb216440 Zea mays

User provided reference genes

Program Settings