Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09480 Brassica napus
Aa31csc549G50 Aethionema arabicum
Actinidia34813 Actinidia chinensis
Actinidia34939 Actinidia chinensis
Ah.02g118920 Amaranthus hybridus
Ah.10g027990 Amaranthus hybridus
Ah.10g028710 Amaranthus hybridus
AL5G20240 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.3CRZ8T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.75B77C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KSB3D6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R0J8GI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TM4QCS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4WQEL Arachis hypogaea
AT2G07687 Arabidopsis thaliana
ATMG00730 Arabidopsis thaliana
ATR0012G027 Amborella trichopoda
BolSC28t60379H Brassica oleracea
BolSC28t60413H Brassica oleracea
BraSC177t45751Z Brassica rapa
BraSC224t45812Z Brassica rapa
BraSC48t46249Z Brassica rapa
BraSC54t46376Z Brassica rapa
BraSC77t46625Z Brassica rapa
C01p34950 Brassica napus
CAN.G1.2 Capsicum annuum
CAN.G134.170 Capsicum annuum
CANSAT16G0022 Cannabis sativa
CARHR283070 Cardamine hirsuta
Ca_28561_v3 Cicer arietinum L.
CDE02G1904 Ceratophyllum demersum
COL.COLO4_04002 Corchorus olitorius
Cpa.g.c32646 Carica papaya
Cre04.g221700 Chlamydomonas reinhardtii
CsaV3_5G015820 Cucumis sativus L.
CsaV3_5G015890 Cucumis sativus L.
CsaV3_5G015960 Cucumis sativus L.
CSS0006210 Camellia sinensis var. sinensis
CSS0015180 Camellia sinensis var. sinensis
DCAR_029125 Daucus carota
DCAR_032446 Daucus carota
Dinv06703 Davidia involucrata
Duzib116G0892 Durio zibethinus
Duzib116G0905 Durio zibethinus
ECA039G0030 Erigeron canadensis
EL10Ac1g02199 Beta vulgaris
Glyma.12G155300 Glycine max
Gohir.D04G096432 Gossypium hirsutum
Gorai.001G162400 Gossypium raimondii
Gorai.013G213200 Gossypium raimondii
HanXRQChr13g0394901 Helianthus annuus
HanXRQMTg0579171 Helianthus annuus
Haze_26985 Corylus avellana
Hma1.2p1_1338F.1_g276546 Hydrangea macrophylla
Lalb_Chr00c24g0406721 Lupinus albus
Lj1g0014382 Lotus japonicus
Lj2P1225T95 Lonicera japonica
Lj2P1227T94 Lonicera japonica
Lj3g0000092 Lotus japonicus
LjContig00315g0011412 Lotus japonicus
Lsat_1_v5_gn_0_2580 Lactuca sativa
Lsat_1_v5_gn_5_16240 Lactuca sativa
Lsat_1_v5_gn_5_16260 Lactuca sativa
Lsat_1_v5_gn_8_111680 Lactuca sativa
Medtr0082s0160 Medicago truncatula
Medtr0495s0020 Medicago truncatula
Medtr6g032895 Medicago truncatula
MELO3C018157.2 Cucumis melo
Nitab4.5_0000062g0140 Nicotiana tabacum
Nitab4.5_0000172g0610 Nicotiana tabacum
Nitab4.5_0000172g1250 Nicotiana tabacum
Nitab4.5_0000681g0270 Nicotiana tabacum
Nitab4.5_0000886g0250 Nicotiana tabacum
Nitab4.5_0001152g0840 Nicotiana tabacum
Nitab4.5_0001788g0090 Nicotiana tabacum
Nitab4.5_0002326g0060 Nicotiana tabacum
Nitab4.5_0002418g0190 Nicotiana tabacum
Nitab4.5_0003945g0100 Nicotiana tabacum
Nitab4.5_0004100g0120 Nicotiana tabacum
Nitab4.5_0004553g0080 Nicotiana tabacum
Nitab4.5_0004553g0100 Nicotiana tabacum
Nitab4.5_0005637g0070 Nicotiana tabacum
Nitab4.5_0008916g0010 Nicotiana tabacum
Nitab4.5_0008916g0090 Nicotiana tabacum
Nitab4.5_0009256g0040 Nicotiana tabacum
Nn1g10038 Nelumbo nucifera
Nn1g10154 Nelumbo nucifera
Oeu000568.1 Olea europaea
Oeu030834.3 Olea europaea
PGR028G0014 Punica granatum
Potri.007G062402 Populus trichocarpa
Psat0s4951g0040 Pisum sativum
RcHm_v2.0_Chr6g0257971 Rosa chinensis
RcHm_v2.0_MTg0498891 Rosa chinensis
Sabra04G0097400 Salix brachista
SabraMtG0005200 Salix brachista
SalBow1G4628 Salvia bowleyana
Sed0001254 Sechium edule
Sed0025732 Sechium edule
SEGI_38498 Sequoiadendron giganteum
SGA_v2.0_scaffold575G53003 Striga asiatica
SHI10787 Sapria himalayana
SHI14272 Sapria himalayana
SHI14273 Sapria himalayana
SHI15111 Sapria himalayana
SHI16155 Sapria himalayana
SHI20513 Sapria himalayana
SHI20514 Sapria himalayana
SHI33643 Sapria himalayana
SHI35300 Sapria himalayana
SHI37163 Sapria himalayana
SHI44549 Sapria himalayana
SHI48376 Sapria himalayana
SHI48878 Sapria himalayana
SHI50742 Sapria himalayana
SHI54766 Sapria himalayana
SMO310G0001 Selaginella moellendorffii
Solyc00g019730.1 Solanum lycopersicum
Solyc00g500303.1 Solanum lycopersicum
Solyc03g013460.1 Solanum lycopersicum
Sopen00g001030 Solanum pennellii
Sopen06g006940 Solanum pennellii
Sp3g25640 Schrenkiella parvula
Thhalv10023004m.g Eutrema salsugineum
TPR.G25412 Trifolium pratense
unitig_87.g28013 Utricularia gibba
VMungo0720G2880 Vigna mungo
VMungo0720G2970 Vigna mungo
VMungo0985G0012 Vigna mungo
Zm00001eb384510 Zea mays
Zm00001eb384560 Zea mays
Zm00001eb434650 Zea mays
Zm00001eb434760 Zea mays
Zm00001eb436440 Zea mays
Zm00001eb437480 Zea mays

User provided reference genes

Program Settings