Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p14010 Brassica napus
Aa31LG1G6890 Aethionema arabicum
Aa31LG9G720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2457 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1099 Anthoceros agrestis
Actinidia30872 Actinidia chinensis
Ah.03g147540 Amaranthus hybridus
AL4G39800 Arabidopsis lyrata
AL7G48600 Arabidopsis lyrata
Aqoxy3G01560 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9892BY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C2TYHM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FH304Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HIDG7R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYGZ5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PXW40T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R96Y40 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZMYY1J Arachis hypogaea
AT5G40950 Arabidopsis thaliana
ATR0561G222 Amborella trichopoda
Atru.chr6.2579 Acer truncatum
AUR62003522 Chenopodium quinoa
AUR62017836 Chenopodium quinoa
BcaB02g07920 Brassica carinata
BcaB06g27577 Brassica carinata
BcaC02g08988 Brassica carinata
BolC4t26396H Brassica oleracea
BolC6t37144H Brassica oleracea
BraA04t17063Z Brassica rapa
C04p48040 Brassica napus
C06p19500 Brassica napus
CAN.G792.8 Capsicum annuum
CANSAT64G0001 Cannabis sativa
CARHR033260 Cardamine hirsuta
CARHR213430 Cardamine hirsuta
Carub.0007s3455 Capsella rubella
Ca_14305_v3 Cicer arietinum L.
CBR_g59428 Chara braunii
Cc07_g00870 Coffea canephora
CDE05G0355 Ceratophyllum demersum
CDE05G1062 Ceratophyllum demersum
CDE05G3217 Ceratophyllum demersum
Cfa007223 Carpinus fangiana
Ciclev10016825m.g Citrus clementina
CiPaw.03G056000 Carya illinoinensis
CiPaw.04G036800 Carya illinoinensis
ClCG11G007120 Citrullus lanatus
COL.COLO4_13264 Corchorus olitorius
Cpa.g.sc171.10 Carica papaya
Cre01.g053600 Chlamydomonas reinhardtii
Cre06.g300800 Chlamydomonas reinhardtii
CsaV3_2G034130 Cucumis sativus L.
CSS0026879 Camellia sinensis var. sinensis
DCAR_015103 Daucus carota
Dinv25656 Davidia involucrata
Duzib187G1674 Durio zibethinus
ECA238G0681 Erigeron canadensis
EL10Ac5g10709 Beta vulgaris
Eucgr.I01643 Eucalyptus grandis
FAN02G1386 Fragaria x ananassa
FAN05G2595 Fragaria x ananassa
FAN09G1054 Fragaria x ananassa
FAN14G1527 Fragaria x ananassa
FvH4_6g53590 Fragaria vesca
Glyma.04G139200 Glycine max
Glyma.11G151300 Glycine max
Gohir.A09G036100 Gossypium hirsutum
Gohir.D09G037100 Gossypium hirsutum
Gorai.006G042400 Gossypium raimondii
GSVIVG01033086001 Vitis vinifera
HanXRQChr14g0450801 Helianthus annuus
Haze_14881 Corylus avellana
Hma1.2p1_1057F.1_g252820 Hydrangea macrophylla
HPP92_025265 Vanilla planifolia
HPP92_025270 Vanilla planifolia
Hund04356 Selenicereus undatus
Lalb_Chr04g0259971 Lupinus albus
Lalb_Chr18g0046701 Lupinus albus
Lj3g0012175 Lotus japonicus
Lj7C610T3 Lonicera japonica
Lsat_1_v5_gn_2_93120 Lactuca sativa
Manes.15G161500 Manihot esculenta
Mapoly0027s0011 Marchantia polymorpha
MBI11_g24616_MAGBIO Magnolia biondii
MCO11G299 Micromonas commoda
MD00G1153700 Malus domestica
MD09G1010200 Malus domestica
MD17G1000400 Malus domestica
Medtr3g020680 Medicago truncatula
MELO3C008191.2 Cucumis melo
Migut.F00059 Erythranthe guttata
Nitab4.5_0000559g0370 Nicotiana tabacum
Nitab4.5_0005161g0040 Nicotiana tabacum
Nn3g16448 Nelumbo nucifera
Oeu005105.1 Olea europaea
Os01g0924000 Oryza sativa ssp. japonica
Peaxi162Scf00700g00029 Petunia axillaris
PGR142G2888 Punica granatum
PGSC0003DMG400019631 Solanum tuberosum
Phvul.005G031700 Phaseolus vulgaris
Potri.001G329500 Populus trichocarpa
Pp3c18_9840 Physcomitrium patens
Pp3c21_16170 Physcomitrium patens
PRCOL_00005417 Prasinoderma coloniale
Prupe.3G225500 Prunus persica
Prupe.3G306900 Prunus persica
Psat5g215240 Pisum sativum
PSO017G0717 Papaver somniferum
PSO478G4423 Papaver somniferum
QL02p071244 Quercus lobata
RcHm_v2.0_Chr2g0175661 Rosa chinensis
Rhsim08G0042600 Rhododendron simsii
Sabra16G0210900 Salix brachista
SalBow4G0293 Salvia bowleyana
SalBow4G2955 Salvia bowleyana
Sc03g0006510 Simmondsia chinensis
Sed0006067 Sechium edule
Sed0017038 Sechium edule
SEGI_37399 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16916 Striga asiatica
SMO334G0113 Selaginella moellendorffii
Solyc11g068820.3 Solanum lycopersicum
Sopen11g027540 Solanum pennellii
Sp7g00970 Schrenkiella parvula
TAR371G0787 Trochodendron aralioides
TAR374G0284 Trochodendron aralioides
THA.LOC104825626 Tarenaya hassleriana
Thecc.04G037800 Theobroma cacao
Thhalv10027943m.g Eutrema salsugineum
TWI34G0325 Tripterygium wilfordii
TWI34G1681 Tripterygium wilfordii
unitig_0.g1924 Utricularia gibba
vmacro18349 Vaccinium macrocarpon
VMungo1080G1067 Vigna mungo
Zm00001eb364200 Zea mays

User provided reference genes

Program Settings