Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35090 Brassica napus
A06p41480 Brassica napus
Aa31LG2G5490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.873 Anthoceros agrestis
Actinidia05920 Actinidia chinensis
Actinidia36200 Actinidia chinensis
Ah.02g120470 Amaranthus hybridus
AL5G16240 Arabidopsis lyrata
Aqoxy3G01541 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0H9GWB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea
AT3G27110 Arabidopsis thaliana
ATR0561G239 Amborella trichopoda
Atru.chr6.2566 Acer truncatum
AUR62003511 Chenopodium quinoa
AUR62017822 Chenopodium quinoa
BcaC06g31019 Brassica carinata
BcaC06g33857 Brassica carinata
BcaC06g33860 Brassica carinata
BolC2t11443H Brassica oleracea
BolC7t44133H Brassica oleracea
BraA02t08515Z Brassica rapa
BraA06t27073Z Brassica rapa
C07p36170 Brassica napus
CAN.G1751.5 Capsicum annuum
CANSAT64G1539 Cannabis sativa
CARHR148330 Cardamine hirsuta
Carub.0005s0536 Capsella rubella
Ca_26782_v3 Cicer arietinum L.
Cc07_g00800 Coffea canephora
Cfa007230 Carpinus fangiana
Ciclev10015840m.g Citrus clementina
CiPaw.03G055300 Carya illinoinensis
ClCG05G013480 Citrullus lanatus
COL.COLO4_17207 Corchorus olitorius
Cpa.g.sc171.18 Carica papaya
Cre14.g620150 Chlamydomonas reinhardtii
CsaV3_3G027030 Cucumis sativus L.
CSS0048682 Camellia sinensis var. sinensis
DCAR_011309 Daucus carota
Dinv25662 Davidia involucrata
Dinv33339 Davidia involucrata
Duzib264G0865 Durio zibethinus
ECA246G2396 Erigeron canadensis
EL10Ac6g15359 Beta vulgaris
Eucgr.I01649 Eucalyptus grandis
FAN02G2357 Fragaria x ananassa
FAN02G3075 Fragaria x ananassa
FAN02G3684 Fragaria x ananassa
FAN05G5024 Fragaria x ananassa
FAN09G0793 Fragaria x ananassa
FAN09G2642 Fragaria x ananassa
FAN14G1519 Fragaria x ananassa
FAN14G4117 Fragaria x ananassa
FvH4_6g53350 Fragaria vesca
FvH4_6g53390 Fragaria vesca
FvH4_6g53420 Fragaria vesca
FvH4_6g53450 Fragaria vesca
FvH4_6g53451 Fragaria vesca
FvH4_6g53460 Fragaria vesca
FvH4_6g53470 Fragaria vesca
Glyma.16G056900 Glycine max
Gohir.A07G228100 Gossypium hirsutum
Gohir.A11G064500 Gossypium hirsutum
Gohir.D07G235300 Gossypium hirsutum
Gohir.D08G117950 Gossypium hirsutum
Gohir.D11G068800 Gossypium hirsutum
Gorai.001G271100 Gossypium raimondii
Gorai.004G126700 Gossypium raimondii
Gorai.007G073600 Gossypium raimondii
GSVIVG01033097001 Vitis vinifera
HanXRQChr17g0550111 Helianthus annuus
Haze_14872 Corylus avellana
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla
HPP92_024293 Vanilla planifolia
HPP92_024304 Vanilla planifolia
Hund04337 Selenicereus undatus
Lalb_Chr14g0363391 Lupinus albus
Lj1g0025061 Lotus japonicus
Lju41A52T99 Lonicera japonica
Lsat_1_v5_gn_0_46360 Lactuca sativa
Lsat_1_v5_gn_9_1240 Lactuca sativa
Manes.15G160600 Manihot esculenta
Mapoly0033s0112 Marchantia polymorpha
MCO03G471 Micromonas commoda
MD09G1011200 Malus domestica
Medtr7g033405 Medicago truncatula
MELO3C014882.2 Cucumis melo
MELO3C032122.2 Cucumis melo
Migut.F00066 Erythranthe guttata
Migut.G01029 Erythranthe guttata
Migut.H00778 Erythranthe guttata
Migut.K01251 Erythranthe guttata
Migut.K01513 Erythranthe guttata
Nitab4.5_0000559g0400 Nicotiana tabacum
Nitab4.5_0005161g0130 Nicotiana tabacum
Nn4g22342 Nelumbo nucifera
Oeu058781.1 Olea europaea
Os01g0970700 Oryza sativa ssp. japonica
Peaxi162Scf00700g00023 Petunia axillaris
PGR142G0641 Punica granatum
PGSC0003DMG400013378 Solanum tuberosum
Phvul.001G094100 Phaseolus vulgaris
Potri.001G330800 Populus trichocarpa
PRCOL_00001739 Prasinoderma coloniale
PRCOL_00005410 Prasinoderma coloniale
Prupe.3G305800 Prunus persica
Psat3g164800 Pisum sativum
PSO017G3506 Papaver somniferum
QL02p071469 Quercus lobata
RcHm_v2.0_Chr2g0175511 Rosa chinensis
Rhsim10G0006600 Rhododendron simsii
Sabra16G0211800 Salix brachista
SalBow4G2288 Salvia bowleyana
Sc03g0006560 Simmondsia chinensis
Sed0004120 Sechium edule
SEGI_10761 Sequoiadendron giganteum
SGA_v2.0_scaffold253G45198 Striga asiatica
SGA_v2.0_scaffold94G28484 Striga asiatica
Solyc03g005000.4 Solanum lycopersicum
Sopen03g001010 Solanum pennellii
Sp2g16240 Schrenkiella parvula
TAR622G1261 Trochodendron aralioides
THA.LOC104825621 Tarenaya hassleriana
Thecc.04G035600 Theobroma cacao
Thhalv10004520m.g Eutrema salsugineum
TPR.G38340 Trifolium pratense
TWI56G1125 Tripterygium wilfordii
unitig_52.g17654 Utricularia gibba
vmacro05954 Vaccinium macrocarpon
VMungo1383G2395 Vigna mungo
Zm00001eb048250 Zea mays
Zm00001eb127160 Zea mays
Zm00001eb146790 Zea mays
Zm00001eb174780 Zea mays
Zm00001eb427710 Zea mays

User provided reference genes

Program Settings