Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25180 Brassica napus
Aa31LG1G26830 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis
Actinidia12252 Actinidia chinensis
Actinidia31399 Actinidia chinensis
AL4G44420 Arabidopsis lyrata
Aqoxy1G04104 Aquilegia oxysepala
Aqoxy3G02061 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea
AT2G45320 Arabidopsis thaliana
ATR0686G054 Amborella trichopoda
ATR1100G025 Amborella trichopoda
Atru.chr2.2479 Acer truncatum
AUR62000130 Chenopodium quinoa
AUR62019310 Chenopodium quinoa
BcaB01g03271 Brassica carinata
BcaC01g05140 Brassica carinata
BolC3t15349H Brassica oleracea
BraA03t11718Z Brassica rapa
C03p30020 Brassica napus
CAN.G530.1 Capsicum annuum
CANSAT01G1400 Cannabis sativa
CARHR140520 Cardamine hirsuta
CARHR140530 Cardamine hirsuta
Carub.0004s2795 Capsella rubella
Ca_19396_v3 Cicer arietinum L.
Cc02_g24020 Coffea canephora
CDE07G1659 Ceratophyllum demersum
Cfa015219 Carpinus fangiana
Ciclev10010228m.g Citrus clementina
CiPaw.01G263000 Carya illinoinensis
CiPaw.09G176500 Carya illinoinensis
ClCG05G002330 Citrullus lanatus
COL.COLO4_12531 Corchorus olitorius
Cpa.g.sc18.108 Carica papaya
CsaV3_3G009760 Cucumis sativus L.
CSS0047351 Camellia sinensis var. sinensis
DCAR_008555 Daucus carota
Dinv32369 Davidia involucrata
Dinv39084 Davidia involucrata
Dinv43696 Davidia involucrata
Duzib138G0844 Durio zibethinus
Duzib138G1608 Durio zibethinus
ECA236G2759 Erigeron canadensis
EL10Ac4g10240 Beta vulgaris
Eucgr.E01443 Eucalyptus grandis
FAN19G0199 Fragaria x ananassa
FAN23G2738 Fragaria x ananassa
FAN26G0204 Fragaria x ananassa
FAN28G0581 Fragaria x ananassa
FAN28G2973 Fragaria x ananassa
FvH4_1g28100 Fragaria vesca
Glyma.06G270700 Glycine max
Glyma.12G134000 Glycine max
Glyma.20G076400 Glycine max
Gohir.A08G135200 Gossypium hirsutum
Gohir.A08G135500 Gossypium hirsutum
Gohir.A08G135550 Gossypium hirsutum
Gohir.D08G156300 Gossypium hirsutum
Gorai.004G162600 Gossypium raimondii
GSVIVG01027677001 Vitis vinifera
HanXRQChr04g0122751 Helianthus annuus
Haze_16797 Corylus avellana
Haze_18350 Corylus avellana
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla
Hund07502 Selenicereus undatus
Lalb_Chr01g0021461 Lupinus albus
Lalb_Chr03g0039601 Lupinus albus
Lalb_Chr08g0243441 Lupinus albus
Lalb_Chr16g0388221 Lupinus albus
Lj3g0004128 Lotus japonicus
Lj7C530T5 Lonicera japonica
Lsat_1_v5_gn_7_9741 Lactuca sativa
Lsat_1_v5_gn_8_86120 Lactuca sativa
Manes.01G266600 Manihot esculenta
Manes.05G046700 Manihot esculenta
MBI14_g08143_MAGBIO Magnolia biondii
MBI14_g08144_MAGBIO Magnolia biondii
MD00G1094900 Malus domestica
Medtr4g053430 Medicago truncatula
Medtr8g102040 Medicago truncatula
Medtr8g102042 Medicago truncatula
Medtr8g102045 Medicago truncatula
MELO3C006197.2 Cucumis melo
Migut.B01623 Erythranthe guttata
MSTRG.17178 Avicennia marina
MSTRG.28297 Avicennia marina
Nitab4.5_0000264g0010 Nicotiana tabacum
Nitab4.5_0005450g0010 Nicotiana tabacum
Nn4g26368 Nelumbo nucifera
Oeu011925.1 Olea europaea
Oeu055499.1 Olea europaea
Os06g0571300 Oryza sativa ssp. japonica
Peaxi162Scf00045g01936 Petunia axillaris
PGR042G0232 Punica granatum
PGSC0003DMG400026305 Solanum tuberosum
Phvul.011G138100 Phaseolus vulgaris
Potri.014G068500 Populus trichocarpa
Pp3c17_6010 Physcomitrium patens
Prupe.6G155400 Prunus persica
Psat0s2995g0040 Pisum sativum
PSO339G2081 Papaver somniferum
PSO384G4101 Papaver somniferum
QL08p052678 Quercus lobata
RcHm_v2.0_Chr3g0497141 Rosa chinensis
Rhsim01G0149000 Rhododendron simsii
Sabra14G0048200 Salix brachista
SalBow5G3218 Salvia bowleyana
Sc16g0011470 Simmondsia chinensis
Sed0014004 Sechium edule
SEGI_33395 Sequoiadendron giganteum
SGA_v2.0_scaffold153G37000 Striga asiatica
SMO119G0175 Selaginella moellendorffii
Solyc08g006610.3 Solanum lycopersicum
Sopen08g002560 Solanum pennellii
Sp4g27340 Schrenkiella parvula
TAR375G1134 Trochodendron aralioides
TAR626G0370 Trochodendron aralioides
THA.LOC104827614 Tarenaya hassleriana
Thecc.01G378200 Theobroma cacao
Thhalv10001485m.g Eutrema salsugineum
TPR.G17234 Trifolium pratense
TWI14G1300 Tripterygium wilfordii
unitig_749.g14376 Utricularia gibba
unitig_76.g29085 Utricularia gibba
vmacro13411 Vaccinium macrocarpon
vmacro21020 Vaccinium macrocarpon
VMungo1127G0102 Vigna mungo
Zm00001eb012290 Zea mays
Zm00001eb084960 Zea mays
Zm00001eb195050 Zea mays
Zm00001eb249030 Zea mays
Zm00001eb270960 Zea mays
Zm00001eb321930 Zea mays
Zm00001eb385140 Zea mays

User provided reference genes

Program Settings