Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p27540 Brassica napus
A08p37430 Brassica napus
Aa31LG1G9340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.154 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.157 Anthoceros agrestis
Actinidia09142 Actinidia chinensis
Actinidia24886 Actinidia chinensis
AL1G12680 Arabidopsis lyrata
Aqoxy5G00512 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.48M1R9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4E1RNV Arachis hypogaea
AT1G03190 Arabidopsis thaliana
ATR0626G059 Amborella trichopoda
Atru.chr5.1425 Acer truncatum
AUR62007972 Chenopodium quinoa
AUR62007973 Chenopodium quinoa
AUR62017677 Chenopodium quinoa
AUR62025818 Chenopodium quinoa
AUR62025819 Chenopodium quinoa
AUR62026893 Chenopodium quinoa
AUR62034034 Chenopodium quinoa
AUR62035461 Chenopodium quinoa
AUR62044203 Chenopodium quinoa
AUR62044240 Chenopodium quinoa
AUR62044301 Chenopodium quinoa
BcaC07g36978 Brassica carinata
BolC8t46846H Brassica oleracea
BolC8t47404H Brassica oleracea
BolC8t52806H Brassica oleracea
BraA08t35641Z Brassica rapa
C08p00480 Brassica napus
C08p06030 Brassica napus
C08p52900 Brassica napus
CAN.G1006.14 Capsicum annuum
CANSAT25G2972 Cannabis sativa
CARHR001170 Cardamine hirsuta
CARHR002530 Cardamine hirsuta
Carub.0001s0233 Capsella rubella
Ca_18819_v3 Cicer arietinum L.
CBR_g47089 Chara braunii
Cc01_g19560 Coffea canephora
CDE06G0365 Ceratophyllum demersum
Cfa006132 Carpinus fangiana
Ciclev10018975m.g Citrus clementina
CiPaw.07G092300 Carya illinoinensis
ClCG09G006960 Citrullus lanatus
COL.COLO4_09105 Corchorus olitorius
COL.COLO4_09106 Corchorus olitorius
Cpa.g.sc52.27 Carica papaya
Cre17.g706300 Chlamydomonas reinhardtii
CsaV3_7G028200 Cucumis sativus L.
CSS0042122 Camellia sinensis var. sinensis
DCAR_002738 Daucus carota
Dinv34746 Davidia involucrata
Duzib211G0289 Durio zibethinus
ECA247G0058 Erigeron canadensis
EL10Ac1g02088 Beta vulgaris
EL10Ac1g02103 Beta vulgaris
EL10Ac6g13926 Beta vulgaris
Eucgr.K03375 Eucalyptus grandis
FAN15G0991 Fragaria x ananassa
FAN24G0367 Fragaria x ananassa
FvH4_2g23690 Fragaria vesca
Glyma.02G082200 Glycine max
Glyma.16G167800 Glycine max
Gohir.A08G068200 Gossypium hirsutum
Gohir.A11G122400 Gossypium hirsutum
Gohir.D08G076600 Gossypium hirsutum
Gohir.D11G127700 Gossypium hirsutum
Gorai.004G081200 Gossypium raimondii
Gorai.007G136500 Gossypium raimondii
GSVIVG01011125001 Vitis vinifera
HanXRQChr04g0127651 Helianthus annuus
HanXRQChr10g0282751 Helianthus annuus
Haze_04719 Corylus avellana
Haze_26829 Corylus avellana
Hma1.2p1_0257F.1_g103540 Hydrangea macrophylla
HPP92_023768 Vanilla planifolia
HPP92_026404 Vanilla planifolia
HPP92_026405 Vanilla planifolia
Hund03003 Selenicereus undatus
Lalb_Chr01g0009611 Lupinus albus
Lj2A1174G27 Lonicera japonica
Lj2g0021203 Lotus japonicus
Lsat_1_v5_gn_9_3880 Lactuca sativa
Manes.05G075500 Manihot esculenta
Mapoly0059s0089 Marchantia polymorpha
MBI18_g32210_MAGBIO Magnolia biondii
MCO11G848 Micromonas commoda
MD03G1266200 Malus domestica
MD11G1286700 Malus domestica
MD11G1286800 Malus domestica
Medtr2g084735 Medicago truncatula
MELO3C015844.2 Cucumis melo
Migut.D00288 Erythranthe guttata
Migut.M00248 Erythranthe guttata
Nitab4.5_0000295g0200 Nicotiana tabacum
Nitab4.5_0006390g0070 Nicotiana tabacum
Nn4g26234 Nelumbo nucifera
Oeu015966.1 Olea europaea
Os05g0144800 Oryza sativa ssp. japonica
Peaxi162Scf00161g01216 Petunia axillaris
PGR044G0219 Punica granatum
Phvul.004G095600 Phaseolus vulgaris
Potri.002G054000 Populus trichocarpa
Pp3c10_16570 Physcomitrium patens
PRCOL_00002595 Prasinoderma coloniale
Prupe.8G242000 Prunus persica
Psat1g104680 Pisum sativum
Psat5g172640 Pisum sativum
PSO210G3721 Papaver somniferum
PSO832G0722 Papaver somniferum
QL07p005503 Quercus lobata
QL12p022031 Quercus lobata
RcHm_v2.0_Chr6g0291151 Rosa chinensis
Rhsim13G0024300 Rhododendron simsii
Sabra02G0043900 Salix brachista
SalBow4G1053 Salvia bowleyana
Sc18g0000660 Simmondsia chinensis
Sed0006598 Sechium edule
SEGI_00354 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00463 Striga asiatica
SGA_v2.0_scaffold304G47926 Striga asiatica
SHI14548 Sapria himalayana
SHI33552 Sapria himalayana
SMO118G0087 Selaginella moellendorffii
Solyc06g008970.4 Solanum lycopersicum
Sopen06g003750 Solanum pennellii
Sp1g02210 Schrenkiella parvula
TAR362G0175 Trochodendron aralioides
THA.LOC104825999 Tarenaya hassleriana
Thecc.01G280400 Theobroma cacao
Thhalv10006888m.g Eutrema salsugineum
Thhalv10011297m.g Eutrema salsugineum
TPR.G22792 Trifolium pratense
TPR.G36709 Trifolium pratense
TWI23G0758 Tripterygium wilfordii
unitig_0.g111 Utricularia gibba
vmacro02566 Vaccinium macrocarpon
VMungo0464G1141 Vigna mungo
Zm00001eb417930 Zea mays

User provided reference genes

Program Settings