Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p06670 Brassica napus
A03p60870 Brassica napus
Aa31LG2G18730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.273 Anthoceros agrestis
Actinidia06431 Actinidia chinensis
Actinidia22260 Actinidia chinensis
Actinidia35320 Actinidia chinensis
Ah.12g061220 Amaranthus hybridus
AL343U10020 Arabidopsis lyrata
AL7G20470 Arabidopsis lyrata
Aqoxy7G02854 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KT3XM2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MFD0CQ Arachis hypogaea
AT4G31570 Arabidopsis thaliana
ATR0580G014 Amborella trichopoda
ATR0580G390 Amborella trichopoda
Atru.chr7.2658 Acer truncatum
Atru.chr7.2660 Acer truncatum
AUR62020289 Chenopodium quinoa
AUR62037714 Chenopodium quinoa
BcaC09g51938 Brassica carinata
BcaNung01513 Brassica carinata
BcaNung04128 Brassica carinata
BolC1t00725H Brassica oleracea
BolC7t46324H Brassica oleracea
BraA01t00625Z Brassica rapa
BraA03t15125Z Brassica rapa
C01p07430 Brassica napus
C07p58760 Brassica napus
CAN.G673.20 Capsicum annuum
CANSAT25G3462 Cannabis sativa
CARHR239450 Cardamine hirsuta
Carub.0007s0900 Capsella rubella
Ca_01524_v3 Cicer arietinum L.
Cc08_g06500 Coffea canephora
CDE04G3090 Ceratophyllum demersum
CDE07G0441 Ceratophyllum demersum
CDE07G1832 Ceratophyllum demersum
Ciclev10007223m.g Citrus clementina
CiPaw.07G211400 Carya illinoinensis
ClCG05G026440 Citrullus lanatus
COL.COLO4_19020 Corchorus olitorius
COL.COLO4_19568 Corchorus olitorius
COL.COLO4_21766 Corchorus olitorius
COL.COLO4_30023 Corchorus olitorius
Cpa.g.sc23.30 Carica papaya
Cpa.g.sc768.4 Carica papaya
CsaV3_3G047150 Cucumis sativus L.
CSS0028290 Camellia sinensis var. sinensis
CSS0043382 Camellia sinensis var. sinensis
DCAR_000688 Daucus carota
Dinv04518 Davidia involucrata
Duzib168G0091 Durio zibethinus
ECA240G0683 Erigeron canadensis
EL10Ac2g02416 Beta vulgaris
FAN15G0510 Fragaria x ananassa
FAN20G2855 Fragaria x ananassa
FAN27G2425 Fragaria x ananassa
FvH4_2g36740 Fragaria vesca
FvH4_6g26670 Fragaria vesca
Glyma.14G135900 Glycine max
Glyma.17G197200 Glycine max
Gohir.A05G063400 Gossypium hirsutum
Gohir.A07G002100 Gossypium hirsutum
Gohir.D05G066000 Gossypium hirsutum
Gohir.D05G066050 Gossypium hirsutum
Gohir.D07G001350 Gossypium hirsutum
Gohir.D07G002400 Gossypium hirsutum
Gorai.001G002300 Gossypium raimondii
Gorai.009G066800 Gossypium raimondii
GSVIVG01033178001 Vitis vinifera
GSVIVG01033179001 Vitis vinifera
HanXRQChr03g0082501 Helianthus annuus
Haze_21759 Corylus avellana
Haze_21760 Corylus avellana
Hma1.2p1_0272F.1_g109200 Hydrangea macrophylla
Hma1.2p1_0272F.1_g109220 Hydrangea macrophylla
HPP92_018359 Vanilla planifolia
Lalb_Chr22g0361211 Lupinus albus
Lj5g0008306 Lotus japonicus
Lj7C748G6 Lonicera japonica
Lsat_1_v5_gn_5_61021 Lactuca sativa
Manes.16G134600 Manihot esculenta
MBI16_g05842_MAGBIO Magnolia biondii
MD08G1126800 Malus domestica
MD15G1106500 Malus domestica
Medtr1g009610 Medicago truncatula
Medtr8g059570 Medicago truncatula
MELO3C003621.2 Cucumis melo
Migut.A00429 Erythranthe guttata
MSTRG.25794 Avicennia marina
Nitab4.5_0000555g0160 Nicotiana tabacum
Nitab4.5_0008193g0020 Nicotiana tabacum
Nn8g40726 Nelumbo nucifera
Oeu053860.1 Olea europaea
Os02g0148300 Oryza sativa ssp. japonica
Peaxi162Scf00045g00173 Petunia axillaris
PGR119G1611 Punica granatum
Phvul.001G060300 Phaseolus vulgaris
Potri.018G008600 Populus trichocarpa
Pp3c4_12010 Physcomitrium patens
Prupe.1G458700 Prunus persica
Prupe.1G459000 Prunus persica
Psat0s839g0040 Pisum sativum
Psat3g013200 Pisum sativum
Psat3g095480 Pisum sativum
Psat4g117200 Pisum sativum
Psat4g119400 Pisum sativum
PSO063G0316 Papaver somniferum
PSO170G4550 Papaver somniferum
QL12p025430 Quercus lobata
RcHm_v2.0_Chr6g0305121 Rosa chinensis
RcHm_v2.0_Chr6g0305291 Rosa chinensis
RcHm_v2.0_Chr7g0204011 Rosa chinensis
Rhsim11G0005000 Rhododendron simsii
SalBow4G0033 Salvia bowleyana
Sc06g0000190 Simmondsia chinensis
Sc06g0000200 Simmondsia chinensis
Sed0008947 Sechium edule
SEGI_07626 Sequoiadendron giganteum
SEGI_23098 Sequoiadendron giganteum
SEGI_37710 Sequoiadendron giganteum
SGA_v2.0_scaffold193G40671 Striga asiatica
SMO146G0186 Selaginella moellendorffii
Solyc08g006420.3 Solanum lycopersicum
Sopen08g002360 Solanum pennellii
Sp7g29400 Schrenkiella parvula
TAR625G0224 Trochodendron aralioides
TAR625G0579 Trochodendron aralioides
TAR625G1380 Trochodendron aralioides
THA.LOC104803624 Tarenaya hassleriana
Thecc.09G008500 Theobroma cacao
Thhalv10024180m.g Eutrema salsugineum
TPR.G12019 Trifolium pratense
TPR.G21359 Trifolium pratense
TWI34G0790 Tripterygium wilfordii
TWI63G1827 Tripterygium wilfordii
unitig_32.g11651 Utricularia gibba
unitig_32.g11652 Utricularia gibba
vmacro00028 Vaccinium macrocarpon
VMungo0647G1874 Vigna mungo
Zm00001eb232290 Zea mays

User provided reference genes

Program Settings