Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p10840 Brassica napus
A08p14020 Brassica napus
Aa31LG6G1520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2005 Anthoceros agrestis
Actinidia02744 Actinidia chinensis
Actinidia07651 Actinidia chinensis
Actinidia39521 Actinidia chinensis
Ah.14g086990 Amaranthus hybridus
AL7G35440 Arabidopsis lyrata
Aqoxy1G01994 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NMJG4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2RHW2 Arachis hypogaea
AT4G18810 Arabidopsis thaliana
ATR0012G016 Amborella trichopoda
Atru.chr10.1570 Acer truncatum
Atru.chr10.1571 Acer truncatum
AUR62039478 Chenopodium quinoa
AUR62041821 Chenopodium quinoa
BcaC09g51481 Brassica carinata
BolC1t01261H Brassica oleracea
BolC3t20422H Brassica oleracea
BraA01t01031Z Brassica rapa
BraA08t33392Z Brassica rapa
C01p12850 Brassica napus
CAN.G411.52 Capsicum annuum
CARHR225670 Cardamine hirsuta
Carub.0007s2242 Capsella rubella
Ca_17897_v3 Cicer arietinum L.
CBR_g23069 Chara braunii
CBR_g48496 Chara braunii
Cc02_g15580 Coffea canephora
Cc02_g15590 Coffea canephora
CDE04G2110 Ceratophyllum demersum
Ciclev10018335m.g Citrus clementina
CiPaw.09G137200 Carya illinoinensis
ClCG03G007450 Citrullus lanatus
COL.COLO4_31237 Corchorus olitorius
Cpa.g.sc7.109 Carica papaya
Cre01.g027850 Chlamydomonas reinhardtii
Cre05.g244800 Chlamydomonas reinhardtii
Cre06.g274650 Chlamydomonas reinhardtii
CsaV3_1G033090 Cucumis sativus L.
CSS0016268 Camellia sinensis var. sinensis
DCAR_027984 Daucus carota
Dinv12753 Davidia involucrata
Dinv32338 Davidia involucrata
Dinv32339 Davidia involucrata
Duzib192G0594 Durio zibethinus
ECA248G0338 Erigeron canadensis
EL10Ac8g20559 Beta vulgaris
Eucgr.E02785 Eucalyptus grandis
FAN11G0629 Fragaria x ananassa
FAN16G3592 Fragaria x ananassa
FAN21G2773 Fragaria x ananassa
FAN25G3188 Fragaria x ananassa
FvH4_3g07310 Fragaria vesca
Glyma.05G161000 Glycine max
Glyma.08G118400 Glycine max
Gohir.A06G133700 Gossypium hirsutum
Gohir.D06G138800 Gossypium hirsutum
Gorai.010G161400 Gossypium raimondii
GSVIVG01021256001 Vitis vinifera
HanXRQChr11g0343901 Helianthus annuus
HanXRQChr13g0424421 Helianthus annuus
Haze_05354 Corylus avellana
Haze_05356 Corylus avellana
Haze_05358 Corylus avellana
Haze_05378 Corylus avellana
Haze_05379 Corylus avellana
Haze_05380 Corylus avellana
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla
HPP92_004012 Vanilla planifolia
HPP92_004025 Vanilla planifolia
Hund04397 Selenicereus undatus
Hund23016 Selenicereus undatus
Hund23039 Selenicereus undatus
Lalb_Chr12g0204951 Lupinus albus
Lj1A1175T55 Lonicera japonica
Lj4g0024191 Lotus japonicus
Lsat_1_v5_gn_1_110100 Lactuca sativa
Manes.16G042900 Manihot esculenta
Mapoly0037s0097 Marchantia polymorpha
MCO03G042 Micromonas commoda
MCO10G294 Micromonas commoda
MD00G1009300 Malus domestica
MD05G1295400 Malus domestica
Medtr8g087310 Medicago truncatula
MELO3C002677.2 Cucumis melo
MELO3C035717.2 Cucumis melo
Migut.M01009 Erythranthe guttata
Nitab4.5_0000437g0070 Nicotiana tabacum
Nitab4.5_0005937g0010 Nicotiana tabacum
Nn3g21104 Nelumbo nucifera
Oeu040921.3 Olea europaea
Os02g0234500 Oryza sativa ssp. japonica
Peaxi162Scf00202g01112 Petunia axillaris
PGR042G1369 Punica granatum
PGSC0003DMG400028420 Solanum tuberosum
Phvul.002G241100 Phaseolus vulgaris
Potri.004G061200 Populus trichocarpa
Pp3c26_9450 Physcomitrium patens
PRCOL_00002435 Prasinoderma coloniale
PRCOL_00004965 Prasinoderma coloniale
PRCOL_00005168 Prasinoderma coloniale
Prupe.3G259500 Prunus persica
Prupe.4G066900 Prunus persica
Prupe.6G055000 Prunus persica
Prupe.7G223300 Prunus persica
Prupe.8G174100 Prunus persica
Psat7g068720 Pisum sativum
PSO170G6378 Papaver somniferum
PSO210G5690 Papaver somniferum
QL05p049965 Quercus lobata
RcHm_v2.0_Chr0c19g0500071 Rosa chinensis
RcHm_v2.0_Chr2g0109861 Rosa chinensis
RcHm_v2.0_Chr2g0109871 Rosa chinensis
RcHm_v2.0_Chr5g0011641 Rosa chinensis
RcHm_v2.0_Chr5g0011651 Rosa chinensis
RcHm_v2.0_Chr5g0061601 Rosa chinensis
Rhsim02G0147000 Rhododendron simsii
Sabra04G0040500 Salix brachista
SalBow8G4237 Salvia bowleyana
Sc05g0006870 Simmondsia chinensis
Sed0028201 Sechium edule
SEGI_40960 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07714 Striga asiatica
SMO119G0157 Selaginella moellendorffii
Solyc02g072160.4 Solanum lycopersicum
Sopen02g021140 Solanum pennellii
Sp7g17520 Schrenkiella parvula
TAR627G0081 Trochodendron aralioides
THA.LOC104806167 Tarenaya hassleriana
Thecc.06G165700 Theobroma cacao
Thhalv10024714m.g Eutrema salsugineum
TPR.G6733 Trifolium pratense
TPR.G7458 Trifolium pratense
TWI53G0456 Tripterygium wilfordii
unitig_0.g743 Utricularia gibba
vmacro16023 Vaccinium macrocarpon
vmacro16024 Vaccinium macrocarpon
VMungo0251G0247 Vigna mungo
Zm00001eb204900 Zea mays

User provided reference genes

Program Settings