Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07830 Brassica napus
Aa31LG11G13130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis
Actinidia34772 Actinidia chinensis
Actinidia38912 Actinidia chinensis
Ah.04g158770 Amaranthus hybridus
Ah.16g102880 Amaranthus hybridus
AL6G27470 Arabidopsis lyrata
Aqoxy2G03953 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea
AT5G16520 Arabidopsis thaliana
ATR0609G131 Amborella trichopoda
Atru.chr12.2109 Acer truncatum
AUR62000356 Chenopodium quinoa
AUR62006699 Chenopodium quinoa
AUR62012181 Chenopodium quinoa
AUR62022817 Chenopodium quinoa
BcaB01g04978 Brassica carinata
BolC3t13400H Brassica oleracea
BraA03t10110Z Brassica rapa
C03p09050 Brassica napus
CAN.G29.21 Capsicum annuum
CANSAT54G1354 Cannabis sativa
CARHR196710 Cardamine hirsuta
Carub.0006s1472 Capsella rubella
Ca_07964_v3 Cicer arietinum L.
Cc09_g03410 Coffea canephora
CDE02G4206 Ceratophyllum demersum
CDE09G0872 Ceratophyllum demersum
CDE12G0554 Ceratophyllum demersum
Cfa006283 Carpinus fangiana
Ciclev10011262m.g Citrus clementina
CiPaw.08G116500 Carya illinoinensis
ClCG11G011000 Citrullus lanatus
COL.COLO4_19830 Corchorus olitorius
Cpa.g.c32193 Carica papaya
CsaV3_2G009490 Cucumis sativus L.
CSS0033137 Camellia sinensis var. sinensis
CSS0033709 Camellia sinensis var. sinensis
CSS0049023 Camellia sinensis var. sinensis
DCAR_023849 Daucus carota
Dinv09865 Davidia involucrata
Dinv29119 Davidia involucrata
Duzib128G1767 Durio zibethinus
Duzib177G0028 Durio zibethinus
ECA232G1216 Erigeron canadensis
ECA233G5391 Erigeron canadensis
EL10Ac2g04761 Beta vulgaris
EL10Ac2g04762 Beta vulgaris
EL10Ac4g09419 Beta vulgaris
Eucgr.H01378 Eucalyptus grandis
FAN02G0830 Fragaria x ananassa
FAN05G0195 Fragaria x ananassa
FAN09G4620 Fragaria x ananassa
FAN14G2044 Fragaria x ananassa
FvH4_6g00750 Fragaria vesca
Glyma.09G252300 Glycine max
Glyma.18G240300 Glycine max
Gohir.A08G223900 Gossypium hirsutum
Gohir.D08G244200 Gossypium hirsutum
Gorai.004G260500 Gossypium raimondii
GSVIVG01019132001 Vitis vinifera
HanXRQChr05g0156961 Helianthus annuus
HanXRQChr11g0323931 Helianthus annuus
Haze_04526 Corylus avellana
Haze_04527 Corylus avellana
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla
HPP92_021393 Vanilla planifolia
HPP92_025240 Vanilla planifolia
HPP92_025241 Vanilla planifolia
Hund07324 Selenicereus undatus
Hund16011 Selenicereus undatus
Hund21883 Selenicereus undatus
Hund29802 Selenicereus undatus
Hund29803 Selenicereus undatus
Hund30008 Selenicereus undatus
Lalb_Chr19g0126771 Lupinus albus
Lj1A580T7 Lonicera japonica
Lj1g0001090 Lotus japonicus
Lju5221A0T19 Lonicera japonica
Lju5221C0T3 Lonicera japonica
Lsat_1_v5_gn_8_2100 Lactuca sativa
Lsat_1_v5_gn_9_48740 Lactuca sativa
Manes.09G184200 Manihot esculenta
MBI07_g25289_MAGBIO Magnolia biondii
MBI07_g25290_MAGBIO Magnolia biondii
MD04G1241700 Malus domestica
MD12G1258400 Malus domestica
Medtr7g079510 Medicago truncatula
MELO3C008759.2 Cucumis melo
Migut.F01884 Erythranthe guttata
MSTRG.320 Avicennia marina
Nitab4.5_0000276g0070 Nicotiana tabacum
Nitab4.5_0000276g0080 Nicotiana tabacum
Nitab4.5_0000456g0100 Nicotiana tabacum
Nitab4.5_0000456g0110 Nicotiana tabacum
Nn1g08317 Nelumbo nucifera
Oeu010147.1 Olea europaea
Oeu010148.1 Olea europaea
Oeu040486.2 Olea europaea
Os01g0100500 Oryza sativa ssp. japonica
Peaxi162Scf00994g00010 Petunia axillaris
PGR031G1864 Punica granatum
PGSC0003DMG401016935 Solanum tuberosum
PGSC0003DMG402016935 Solanum tuberosum
Phvul.008G055900 Phaseolus vulgaris
Potri.013G087400 Populus trichocarpa
Prupe.6G359100 Prunus persica
Psat3g104240 Pisum sativum
Psat4g088520 Pisum sativum
PSO675G1387 Papaver somniferum
QL01p050313 Quercus lobata
QL01p050319 Quercus lobata
QL01p050333 Quercus lobata
RcHm_v2.0_Chr2g0115301 Rosa chinensis
RcHm_v2.0_Chr3g0448231 Rosa chinensis
RcHm_v2.0_Chr7g0239281 Rosa chinensis
Rhsim09G0131400 Rhododendron simsii
Sabra13G0070000 Salix brachista
SalBow6G4947 Salvia bowleyana
Sc09g0001590 Simmondsia chinensis
Sed0005684 Sechium edule
Sed0008551 Sechium edule
SEGI_07718 Sequoiadendron giganteum
SEGI_28852 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33172 Striga asiatica
SHI13733 Sapria himalayana
Solyc04g051310.4 Solanum lycopersicum
Sopen04g022730 Solanum pennellii
Sp6g27630 Schrenkiella parvula
TAR633G0866 Trochodendron aralioides
THA.LOC104802949 Tarenaya hassleriana
THA.LOC104827466 Tarenaya hassleriana
Thecc.05G206100 Theobroma cacao
Thhalv10012976m.g Eutrema salsugineum
TPR.G32005 Trifolium pratense
TWI23G0564 Tripterygium wilfordii
unitig_26.g8932 Utricularia gibba
vmacro10395 Vaccinium macrocarpon
VMungo1383G2490 Vigna mungo
Zm00001eb017080 Zea mays
Zm00001eb334030 Zea mays

User provided reference genes

Program Settings