Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p24280 Brassica napus
A03p25540 Brassica napus
A03p31890 Brassica napus
A05p01500 Brassica napus
A10p00520 Brassica napus
Aa31LG1G10830 Aethionema arabicum
Aa31LG1G27670 Aethionema arabicum
Aa31LG5G850 Aethionema arabicum
Actinidia10100 Actinidia chinensis
Actinidia20192 Actinidia chinensis
AL1G10980 Arabidopsis lyrata
AL4G45600 Arabidopsis lyrata
AL6G52250 Arabidopsis lyrata
Aqoxy7G00174 Aquilegia oxysepala
AT1G01453 Arabidopsis thaliana
AT2G46300 Arabidopsis thaliana
AT4G01110 Arabidopsis thaliana
ATR1127G036 Amborella trichopoda
Atru.chr5.616 Acer truncatum
AUR62004447 Chenopodium quinoa
AUR62023503 Chenopodium quinoa
BcaB01g02336 Brassica carinata
BcaB01g03231 Brassica carinata
BcaB03g13583 Brassica carinata
BcaC01g05079 Brassica carinata
BcaC01g05083 Brassica carinata
BcaC01g05085 Brassica carinata
BcaC01g06846 Brassica carinata
BcaC02g12521 Brassica carinata
BcaC03g16062 Brassica carinata
BolC2t09843H Brassica oleracea
BolC3t15395H Brassica oleracea
BolC3t16162H Brassica oleracea
BolC4t21822H Brassica oleracea
BolC5t28844H Brassica oleracea
BraA02t07418Z Brassica rapa
BraA03t11771Z Brassica rapa
BraA03t12361Z Brassica rapa
BraA05t19146Z Brassica rapa
BraA10t42331Z Brassica rapa
C02p38280 Brassica napus
C03p30470 Brassica napus
C03p38880 Brassica napus
C04p01700 Brassica napus
C05p00550 Brassica napus
CAN.G1651.2 Capsicum annuum
CANSAT56G4005 Cannabis sativa
CARHR000970 Cardamine hirsuta
CARHR141580 Cardamine hirsuta
CARHR249180 Cardamine hirsuta
Carub.0001s0080 Capsella rubella
Carub.0004s2900 Capsella rubella
Carub.0006s3617 Capsella rubella
Ca_09491_v3 Cicer arietinum L.
Ciclev10021837m.g Citrus clementina
CiPaw.01G071600 Carya illinoinensis
CiPaw.02G038200 Carya illinoinensis
ClCG08G003840 Citrullus lanatus
CsaV3_6G003970 Cucumis sativus L.
CSS0038689 Camellia sinensis var. sinensis
Dinv32550 Davidia involucrata
Dinv43890 Davidia involucrata
Duzib133G0451 Durio zibethinus
Duzib138G0021 Durio zibethinus
FAN01G2778 Fragaria x ananassa
FAN03G0560 Fragaria x ananassa
FAN06G0749 Fragaria x ananassa
FAN06G4203 Fragaria x ananassa
FAN10G1950 Fragaria x ananassa
FAN10G2759 Fragaria x ananassa
FvH4_7g15840 Fragaria vesca
Glyma.03G255300 Glycine max
Glyma.19G252900 Glycine max
Gohir.A08G126100 Gossypium hirsutum
Gohir.A11G094200 Gossypium hirsutum
Gohir.A12G110633 Gossypium hirsutum
Gohir.D08G147400 Gossypium hirsutum
Gohir.D11G099200 Gossypium hirsutum
Gohir.D12G113800 Gossypium hirsutum
Gorai.004G153000 Gossypium raimondii
Gorai.007G105400 Gossypium raimondii
Gorai.008G123300 Gossypium raimondii
Haze_15614 Corylus avellana
Hma1.2p1_0384F.1_g141000 Hydrangea macrophylla
Hma1.2p1_2972F.1_g331100 Hydrangea macrophylla
HPP92_005223 Vanilla planifolia
HPP92_026775 Vanilla planifolia
Lalb_Chr04g0261721 Lupinus albus
Lj1g0025938 Lotus japonicus
Lj7A504T56 Lonicera japonica
Manes.05G026400 Manihot esculenta
MBI06_g02230_MAGBIO Magnolia biondii
MD01G1075000 Malus domestica
MD07G1144100 Malus domestica
Medtr7g116930 Medicago truncatula
MELO3C006056.2 Cucumis melo
MELO3C029922.2 Cucumis melo
Nitab4.5_0000522g0010 Nicotiana tabacum
Nitab4.5_0002262g0140 Nicotiana tabacum
Nitab4.5_0003779g0030 Nicotiana tabacum
Nitab4.5_0005619g0010 Nicotiana tabacum
Nn1g01788 Nelumbo nucifera
Nn7g37376 Nelumbo nucifera
Oeu008679.1 Olea europaea
Peaxi162Scf00099g00191 Petunia axillaris
Peaxi162Scf00403g00074 Petunia axillaris
PGR042G2135 Punica granatum
PGSC0003DMG400019400 Solanum tuberosum
Phvul.006G110000 Phaseolus vulgaris
Potri.002G167300 Populus trichocarpa
Potri.014G094400 Populus trichocarpa
Prupe.2G183000 Prunus persica
Psat3g003480 Pisum sativum
PSO135G0875 Papaver somniferum
PSO384G3117 Papaver somniferum
QL04p059571 Quercus lobata
RcHm_v2.0_Chr1g0358651 Rosa chinensis
Rhsim07G0007300 Rhododendron simsii
Sabra02G0144400 Salix brachista
Sabra14G0069000 Salix brachista
SalBow5G4166 Salvia bowleyana
Sc01g0002990 Simmondsia chinensis
Sed0006216 Sechium edule
Sed0008780 Sechium edule
Sed0019896 Sechium edule
SGA_v2.0_scaffold11G05717 Striga asiatica
SHI13195 Sapria himalayana
Solyc10g011750.3 Solanum lycopersicum
Sopen10g005540 Solanum pennellii
Sp1g00860 Schrenkiella parvula
Sp4g28340 Schrenkiella parvula
Sp6g01000 Schrenkiella parvula
TAR375G0073 Trochodendron aralioides
THA.LOC104802056 Tarenaya hassleriana
THA.LOC104817334 Tarenaya hassleriana
THA.LOC104825868 Tarenaya hassleriana
Thecc.01G348100 Theobroma cacao
Thecc.01G366500 Theobroma cacao
Thhalv10001596m.g Eutrema salsugineum
Thhalv10009686m.g Eutrema salsugineum
Thhalv10028895m.g Eutrema salsugineum
TPR.G4707 Trifolium pratense
TWI14G0215 Tripterygium wilfordii
vmacro13200 Vaccinium macrocarpon
VMungo0540G0638 Vigna mungo

User provided reference genes

Program Settings