Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16120 Brassica napus
Aa31LG5G7110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis
Actinidia33768 Actinidia chinensis
Ah.08g220070 Amaranthus hybridus
AL4G23770 Arabidopsis lyrata
Aqoxy2G02310 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea
AT2G29210 Arabidopsis thaliana
ATR0559G187 Amborella trichopoda
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum
AUR62001736 Chenopodium quinoa
AUR62020041 Chenopodium quinoa
BcaB02g10233 Brassica carinata
BcaB05g22029 Brassica carinata
BolC4t23701H Brassica oleracea
BraA05t20522Z Brassica rapa
C04p21810 Brassica napus
CAN.G3.46 Capsicum annuum
CARHR122470 Cardamine hirsuta
Carub.0004s1023 Capsella rubella
Carub.0004s1024 Capsella rubella
Ca_20616_v3 Cicer arietinum L.
CBR_g50691 Chara braunii
Cc01_g13350 Coffea canephora
CDE06G0141 Ceratophyllum demersum
CDE06G2066 Ceratophyllum demersum
CDE06G2602 Ceratophyllum demersum
CDE07G0344 Ceratophyllum demersum
Ciclev10030390m.g Citrus clementina
CiPaw.13G089200 Carya illinoinensis
COL.COLO4_18578 Corchorus olitorius
Cpa.g.sc81.96 Carica papaya
Cpa.g.sc81.97 Carica papaya
Cre16.g678050 Chlamydomonas reinhardtii
CsaV3_1G034540 Cucumis sativus L.
CSS0046995 Camellia sinensis var. sinensis
DCAR_005942 Daucus carota
Dinv17047 Davidia involucrata
Dinv34287 Davidia involucrata
Dinv42991 Davidia involucrata
Dinv43106 Davidia involucrata
Duzib168G0713 Durio zibethinus
ECA247G0723 Erigeron canadensis
EL10Ac7g16070 Beta vulgaris
Eucgr.B02307 Eucalyptus grandis
FAN11G2353 Fragaria x ananassa
FAN16G3680 Fragaria x ananassa
FAN21G1054 Fragaria x ananassa
FAN25G3327 Fragaria x ananassa
FvH4_3g36942 Fragaria vesca
Glyma.11G136000 Glycine max
Glyma.12G059700 Glycine max
Gohir.A13G226600 Gossypium hirsutum
Gohir.D13G232000 Gossypium hirsutum
Gorai.013G262700 Gossypium raimondii
GSVIVG01024906001 Vitis vinifera
HanXRQChr01g0001871 Helianthus annuus
HanXRQChr08g0237371 Helianthus annuus
HanXRQChr08g0237461 Helianthus annuus
HanXRQChr08g0237471 Helianthus annuus
Haze_24170 Corylus avellana
Haze_24175 Corylus avellana
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla
HPP92_012608 Vanilla planifolia
HPP92_012609 Vanilla planifolia
Hund04921 Selenicereus undatus
Lalb_Chr01g0003471 Lupinus albus
Lalb_Chr03g0026441 Lupinus albus
Lalb_Chr19g0137981 Lupinus albus
Lj3g0025501 Lotus japonicus
Lsat_1_v5_gn_9_24820 Lactuca sativa
Lsat_1_v5_gn_9_24840 Lactuca sativa
Manes.01G169300 Manihot esculenta
Mapoly0063s0002 Marchantia polymorpha
MBI14_g11598_MAGBIO Magnolia biondii
MCO11G283 Micromonas commoda
MD03G1086100 Malus domestica
MD11G1094700 Malus domestica
Medtr4g064740 Medicago truncatula
Migut.D00877 Erythranthe guttata
MSTRG.21221 Avicennia marina
Nitab4.5_0001999g0010 Nicotiana tabacum
Nitab4.5_0005248g0020 Nicotiana tabacum
Nn1g05503 Nelumbo nucifera
Nn1g06116 Nelumbo nucifera
Nn2g11213 Nelumbo nucifera
Nn2g12388 Nelumbo nucifera
Nn2g13459 Nelumbo nucifera
Nn3g20458 Nelumbo nucifera
Nn3g20459 Nelumbo nucifera
Oeu053892.1 Olea europaea
Os03g0270200 Oryza sativa ssp. japonica
Peaxi162Scf00676g00220 Petunia axillaris
PGR102G2168 Punica granatum
PGSC0003DMG400027986 Solanum tuberosum
Phvul.011G061700 Phaseolus vulgaris
Potri.001G244600 Populus trichocarpa
Potri.009G036900 Populus trichocarpa
Pp3c10_18390 Physcomitrium patens
Pp3c3_30240 Physcomitrium patens
Pp3c3_30241 Physcomitrium patens
PRCOL_00003490 Prasinoderma coloniale
Prupe.6G070300 Prunus persica
Psat7g210320 Pisum sativum
PSO339G5769 Papaver somniferum
QL01p029224 Quercus lobata
RcHm_v2.0_Chr1g0354421 Rosa chinensis
RcHm_v2.0_Chr1g0367371 Rosa chinensis
RcHm_v2.0_Chr5g0066361 Rosa chinensis
Rhsim13G0077000 Rhododendron simsii
Sabra09G0026100 Salix brachista
Sabra16G0148400 Salix brachista
SalBow6G2010 Salvia bowleyana
Sc12g0001240 Simmondsia chinensis
Sed0000001 Sechium edule
Sed0011931 Sechium edule
SEGI_12829 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31544 Striga asiatica
SHI05908 Sapria himalayana
SHI07724 Sapria himalayana
SHI25075 Sapria himalayana
SHI29822 Sapria himalayana
SHI31247 Sapria himalayana
SHI32778 Sapria himalayana
SHI33547 Sapria himalayana
SMO144G0189 Selaginella moellendorffii
Solyc09g030390.3 Solanum lycopersicum
Sopen09g013470 Solanum pennellii
Sp4g12020 Schrenkiella parvula
TAR633G1610 Trochodendron aralioides
TAR636G0020 Trochodendron aralioides
TAR636G0138 Trochodendron aralioides
THA.LOC104800686 Tarenaya hassleriana
Thecc.09G315500 Theobroma cacao
Thhalv10016250m.g Eutrema salsugineum
TPR.G23607 Trifolium pratense
unitig_746.g26715 Utricularia gibba
vmacro03027 Vaccinium macrocarpon
VMungo1127G2033 Vigna mungo
Zm00001eb012100 Zea mays
Zm00001eb222410 Zea mays
Zm00001eb284680 Zea mays
Zm00001eb397830 Zea mays
Zm00001eb397850 Zea mays

User provided reference genes

Program Settings