Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48100 Brassica napus
A09p44140 Brassica napus
Aa31LG4G19160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2341 Anthoceros agrestis
Actinidia19230 Actinidia chinensis
Actinidia26108 Actinidia chinensis
Ah.02g124830 Amaranthus hybridus
AL5G31470 Arabidopsis lyrata
Aqoxy5G01510 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.U2HICA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U51VHD Arachis hypogaea
AT3G51050 Arabidopsis thaliana
ATR0661G156 Amborella trichopoda
Atru.chr3.745 Acer truncatum
AUR62004121 Chenopodium quinoa
AUR62007635 Chenopodium quinoa
BcaB05g23544 Brassica carinata
BcaC06g33060 Brassica carinata
BcaC07g39583 Brassica carinata
BolC7t45128H Brassica oleracea
BolC8t50252H Brassica oleracea
BraA09t39874Z Brassica rapa
C07p46120 Brassica napus
C08p26350 Brassica napus
C08p26360 Brassica napus
CAN.G358.18 Capsicum annuum
CANSAT01G3091 Cannabis sativa
CARHR160630 Cardamine hirsuta
Carub.0005s1745 Capsella rubella
Ca_24882_v3 Cicer arietinum L.
CBR_g41477 Chara braunii
Cc07_g10240 Coffea canephora
CDE04G3147 Ceratophyllum demersum
CDE12G0395 Ceratophyllum demersum
Cfa006924 Carpinus fangiana
Ciclev10025040m.g Citrus clementina
CiPaw.07G054500 Carya illinoinensis
ClCG01G020030 Citrullus lanatus
COL.COLO4_21984 Corchorus olitorius
Cpa.g.sc6.195 Carica papaya
Cre07.g336050 Chlamydomonas reinhardtii
CsaV3_6G046790 Cucumis sativus L.
CSS0019296 Camellia sinensis var. sinensis
DCAR_031672 Daucus carota
Dinv33584 Davidia involucrata
Dinv33585 Davidia involucrata
Dinv33586 Davidia involucrata
Dinv40040 Davidia involucrata
Duzib147G0248 Durio zibethinus
Duzib187G1632 Durio zibethinus
ECA238G0541 Erigeron canadensis
EL10As8g23870 Beta vulgaris
Eucgr.J02388 Eucalyptus grandis
FAN19G3097 Fragaria x ananassa
FAN23G1678 Fragaria x ananassa
FAN26G0993 Fragaria x ananassa
FAN28G1722 Fragaria x ananassa
FvH4_1g12400 Fragaria vesca
Glyma.01G170600 Glycine max
Glyma.11G072700 Glycine max
Gohir.A11G178900 Gossypium hirsutum
Gohir.A12G062100 Gossypium hirsutum
Gohir.D11G186500 Gossypium hirsutum
Gohir.D12G062000 Gossypium hirsutum
Gorai.007G198300 Gossypium raimondii
Gorai.008G065200 Gossypium raimondii
GSVIVG01018847001 Vitis vinifera
HanXRQChr07g0191281 Helianthus annuus
HanXRQChr14g0441521 Helianthus annuus
HanXRQChr15g0473031 Helianthus annuus
Haze_03825 Corylus avellana
Hma1.2p1_0913F.1_g236050 Hydrangea macrophylla
Hma1.2p1_0913F.1_g236060 Hydrangea macrophylla
HPP92_021000 Vanilla planifolia
Hund14017 Selenicereus undatus
Hund16465 Selenicereus undatus
Lalb_Chr05g0212611 Lupinus albus
Lalb_Chr16g0377681 Lupinus albus
Lj2g0010053 Lotus japonicus
Lj4C212G4 Lonicera japonica
Lsat_1_v5_gn_2_78240 Lactuca sativa
Manes.02G100000 Manihot esculenta
Mapoly0159s0016 Marchantia polymorpha
MBI01_g27920_MAGBIO Magnolia biondii
MBI01_g27921_MAGBIO Magnolia biondii
MBI17_g20217_MAGBIO Magnolia biondii
MCO09G435 Micromonas commoda
MD02G1137100 Malus domestica
MD15G1250800 Malus domestica
Medtr5g021150 Medicago truncatula
MELO3C007876.2 Cucumis melo
Migut.H02494 Erythranthe guttata
MSTRG.23270 Avicennia marina
Nitab4.5_0000723g0040 Nicotiana tabacum
Nitab4.5_0007070g0020 Nicotiana tabacum
Nn5g29168 Nelumbo nucifera
Oeu005146.2 Olea europaea
Oeu024029.1 Olea europaea
Os02g0100700 Oryza sativa ssp. japonica
Peaxi162Scf00084g01221 Petunia axillaris
PGR102G2820 Punica granatum
PGSC0003DMG400003539 Solanum tuberosum
Phvul.002G166800 Phaseolus vulgaris
Potri.005G118300 Populus trichocarpa
Potri.007G017600 Populus trichocarpa
Pp3c11_13530 Physcomitrium patens
Pp3c2_36750 Physcomitrium patens
Pp3c2_36751 Physcomitrium patens
Pp3c2_37540 Physcomitrium patens
PRCOL_00007058 Prasinoderma coloniale
Prupe.7G163500 Prunus persica
Psat2g156920 Pisum sativum
PSO541G1023 Papaver somniferum
PSO675G4614 Papaver somniferum
QL06p034609 Quercus lobata
RcHm_v2.0_Chr2g0100261 Rosa chinensis
Rhsim08G0123900 Rhododendron simsii
Sabra05G0097300 Salix brachista
Sabra07G0015000 Salix brachista
Sabra07G0015100 Salix brachista
SalBow8G4654 Salvia bowleyana
Sc03g0003300 Simmondsia chinensis
Sed0007947 Sechium edule
Sed0022975 Sechium edule
SEGI_18766 Sequoiadendron giganteum
SEGI_33135 Sequoiadendron giganteum
SGA_v2.0_scaffold280G46851 Striga asiatica
SHI08598 Sapria himalayana
SHI08600 Sapria himalayana
SMO340G0175 Selaginella moellendorffii
Solyc02g084690.3 Solanum lycopersicum
Sopen02g029360 Solanum pennellii
Sp5g11160 Schrenkiella parvula
TAR376G0780 Trochodendron aralioides
TAR625G0301 Trochodendron aralioides
THA.LOC104826639 Tarenaya hassleriana
Thecc.01G025400 Theobroma cacao
Thhalv10010167m.g Eutrema salsugineum
TPR.G2381 Trifolium pratense
TWI73G0422 Tripterygium wilfordii
unitig_699.g19557 Utricularia gibba
unitig_699.g19558 Utricularia gibba
vmacro17731 Vaccinium macrocarpon
vmacro17732 Vaccinium macrocarpon
VMungo1215G3295 Vigna mungo
Zm00001eb228990 Zea mays

User provided reference genes

Program Settings