Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08330 Brassica napus
A08p19540 Brassica napus
Aa31LG2G20710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2105 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5188 Anthoceros agrestis
Actinidia29915 Actinidia chinensis
Actinidia38461 Actinidia chinensis
Ah.06g188360 Amaranthus hybridus
Ah.12g064130 Amaranthus hybridus
AL7G22420 Arabidopsis lyrata
Aqoxy7G03996 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.20C8M4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7L7952 Arachis hypogaea
AT4G29830 Arabidopsis thaliana
ATR0693G369 Amborella trichopoda
Atru.chr12.2297 Acer truncatum
AUR62038818 Chenopodium quinoa
AUR62041890 Chenopodium quinoa
BcaB03g12621 Brassica carinata
BcaC01g01189 Brassica carinata
BcaC01g01191 Brassica carinata
BcaC09g51761 Brassica carinata
BolC1t00925H Brassica oleracea
BolC3t21221H Brassica oleracea
BraA01t00781Z Brassica rapa
C01p09370 Brassica napus
C03p89080 Brassica napus
CANSAT56G1855 Cannabis sativa
CARHR237730 Cardamine hirsuta
Carub.0004s1480 Capsella rubella
Ca_21304_v3 Cicer arietinum L.
CBR_g54314 Chara braunii
Cc06_g11820 Coffea canephora
CDE05G0358 Ceratophyllum demersum
Cfa003042 Carpinus fangiana
Cfa018237 Carpinus fangiana
Cfa018999 Carpinus fangiana
Cfa025545 Carpinus fangiana
Ciclev10010808m.g Citrus clementina
CiPaw.03G210900 Carya illinoinensis
ClCG03G015320 Citrullus lanatus
COL.COLO4_18151 Corchorus olitorius
COL.COLO4_27437 Corchorus olitorius
Cpa.g.sc28.112 Carica papaya
Cre11.g468377 Chlamydomonas reinhardtii
CsaV3_1G040710 Cucumis sativus L.
CSS0008874 Camellia sinensis var. sinensis
CSS0027881 Camellia sinensis var. sinensis
DCAR_024719 Daucus carota
Dinv36800 Davidia involucrata
Duzib150G1015 Durio zibethinus
Duzib168G1011 Durio zibethinus
ECA240G1097 Erigeron canadensis
ECA240G1376 Erigeron canadensis
EL10Ac2g02619 Beta vulgaris
Eucgr.C03405 Eucalyptus grandis
FAN19G1484 Fragaria x ananassa
FAN23G2025 Fragaria x ananassa
FAN26G3474 Fragaria x ananassa
FAN28G0640 Fragaria x ananassa
FAN28G1692 Fragaria x ananassa
FvH4_1g30420 Fragaria vesca
Glyma.13G107300 Glycine max
Glyma.17G052100 Glycine max
Gohir.A06G074300 Gossypium hirsutum
Gohir.A07G013500 Gossypium hirsutum
Gohir.D06G073100 Gossypium hirsutum
Gohir.D07G013300 Gossypium hirsutum
Gorai.001G014000 Gossypium raimondii
Gorai.010G085400 Gossypium raimondii
GSVIVG01015149001 Vitis vinifera
HanXRQChr03g0063021 Helianthus annuus
Haze_25954 Corylus avellana
Haze_27115 Corylus avellana
Hma1.2p1_0672F.1_g200870 Hydrangea macrophylla
Lalb_Chr07g0181001 Lupinus albus
Lj4A288G22 Lonicera japonica
Lj4g0018142 Lotus japonicus
Lsat_1_v5_gn_7_34720 Lactuca sativa
Manes.16G098700 Manihot esculenta
Mapoly0001s0052 Marchantia polymorpha
MBI15_g27849_MAGBIO Magnolia biondii
MBI16_g18211_MAGBIO Magnolia biondii
MCO13G438 Micromonas commoda
MD02G1085500 Malus domestica
MD15G1212600 Malus domestica
Medtr4g125710 Medicago truncatula
MELO3C015499.2 Cucumis melo
Migut.L01534 Erythranthe guttata
MSTRG.10530 Avicennia marina
Nitab4.5_0000073g0020 Nicotiana tabacum
Nitab4.5_0002079g0070 Nicotiana tabacum
Nitab4.5_0002642g0040 Nicotiana tabacum
Nitab4.5_0002842g0020 Nicotiana tabacum
Nn6g35560 Nelumbo nucifera
Nn8g38754 Nelumbo nucifera
Oeu051307.1 Olea europaea
Oeu051308.2 Olea europaea
Oeu054828.1 Olea europaea
Os11g0660300 Oryza sativa ssp. japonica
Peaxi162Scf00498g00525 Petunia axillaris
PGR142G4460 Punica granatum
PGSC0003DMG400000330 Solanum tuberosum
PGSC0003DMG400016078 Solanum tuberosum
Phvul.003G133800 Phaseolus vulgaris
Potri.006G145800 Populus trichocarpa
Pp3c2_28090 Physcomitrium patens
Pp3c2_28110 Physcomitrium patens
Prupe.6G180900 Prunus persica
Psat4g016320 Pisum sativum
PSO210G4100 Papaver somniferum
PSO210G7456 Papaver somniferum
QL02p061718 Quercus lobata
RcHm_v2.0_Chr3g0490661 Rosa chinensis
Rhsim03G0230900 Rhododendron simsii
Rhsim03G0233600 Rhododendron simsii
Sabra06G0115300 Salix brachista
SalBow1G7018 Salvia bowleyana
Sc09g0008330 Simmondsia chinensis
Sed0005858 Sechium edule
Sed0024958 Sechium edule
SEGI_01394 Sequoiadendron giganteum
SEGI_09202 Sequoiadendron giganteum
SEGI_15722 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10051 Striga asiatica
SHI30700 Sapria himalayana
SMO244G0035 Selaginella moellendorffii
Solyc07g041080.3 Solanum lycopersicum
Solyc12g009030.2 Solanum lycopersicum
Sopen07g020370 Solanum pennellii
Sopen12g003960 Solanum pennellii
Sp7g27640 Schrenkiella parvula
TAR149G0001 Trochodendron aralioides
TAR587G0001 Trochodendron aralioides
TAR624G0089 Trochodendron aralioides
THA.LOC104820014 Tarenaya hassleriana
Thecc.09G082600 Theobroma cacao
Thhalv10027356m.g Eutrema salsugineum
TPR.G9439 Trifolium pratense
TWI32G0188 Tripterygium wilfordii
TWI63G0393 Tripterygium wilfordii
unitig_699.g19288 Utricularia gibba
unitig_85.g27254 Utricularia gibba
vmacro06306 Vaccinium macrocarpon
VMungo1215G2073 Vigna mungo
Zm00001eb165440 Zea mays

User provided reference genes

Program Settings