Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38010 Brassica napus
A06p38430 Brassica napus
Aa31LG11G7840 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1032 Anthoceros agrestis
Actinidia15583 Actinidia chinensis
Actinidia40351 Actinidia chinensis
Ah.04g154920 Amaranthus hybridus
AL8G22960 Arabidopsis lyrata
Aqoxy2G02819 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A1K99E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I4LEPW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PXPP98 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RF9CFS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T63ME6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UTG064 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W9GTE1 Arachis hypogaea
AT5G49320 Arabidopsis thaliana
ATR0706G251 Amborella trichopoda
Atru.chr4.2951 Acer truncatum
AUR62016151 Chenopodium quinoa
AUR62035066 Chenopodium quinoa
AUR62043573 Chenopodium quinoa
BcaB07g34148 Brassica carinata
BcaC03g17714 Brassica carinata
BcaC06g30702 Brassica carinata
BcaNung02596 Brassica carinata
BolC2t11792H Brassica oleracea
BolC7t44512H Brassica oleracea
BraA02t08785Z Brassica rapa
BraA06t26757Z Brassica rapa
C02p57210 Brassica napus
C07p39840 Brassica napus
CAN.G1016.6 Capsicum annuum
CANSAT78G1129 Cannabis sativa
CARHR182240 Cardamine hirsuta
Carub.0008s0727 Capsella rubella
Carub.0008s0919 Capsella rubella
Ca_01881_v3 Cicer arietinum L.
Ca_01895_v3 Cicer arietinum L.
Cc03_g01170 Coffea canephora
CDE05G0725 Ceratophyllum demersum
CDE05G1990 Ceratophyllum demersum
CDE11G0634 Ceratophyllum demersum
Cfa015478 Carpinus fangiana
Ciclev10007083m.g Citrus clementina
CiPaw.01G142400 Carya illinoinensis
CiPaw.02G077100 Carya illinoinensis
ClCG05G006400 Citrullus lanatus
COL.COLO4_34676 Corchorus olitorius
Cpa.g.sc9.99 Carica papaya
CsaV3_3G015020 Cucumis sativus L.
CSS0004405 Camellia sinensis var. sinensis
DCAR_002501 Daucus carota
DCAR_030483 Daucus carota
Dinv02072 Davidia involucrata
Dinv44320 Davidia involucrata
Duzib052G1152 Durio zibethinus
Duzib151G0017 Durio zibethinus
ECA246G2788 Erigeron canadensis
EL10Ac3g04926 Beta vulgaris
Eucgr.A00195 Eucalyptus grandis
FAN07G0192 Fragaria x ananassa
FAN12G2949 Fragaria x ananassa
FAN12G3988 Fragaria x ananassa
FvH4_4g19280 Fragaria vesca
Glyma.09G039500 Glycine max
Glyma.15G144700 Glycine max
Glyma.17G031200 Glycine max
Gohir.A10G168900 Gossypium hirsutum
Gohir.D10G175100 Gossypium hirsutum
Gorai.011G195900 Gossypium raimondii
GSVIVG01035046001 Vitis vinifera
HanXRQChr03g0093441 Helianthus annuus
Haze_01089 Corylus avellana
Hma1.2p1_0013F.1_g008930 Hydrangea macrophylla
HPP92_001064 Vanilla planifolia
Hund02954 Selenicereus undatus
Hund11951 Selenicereus undatus
Lalb_Chr12g0200981 Lupinus albus
Lalb_Chr18g0058921 Lupinus albus
Lalb_Chr20g0121021 Lupinus albus
Lj3C827T17 Lonicera japonica
Lj6A685T16 Lonicera japonica
Lj6g0005650 Lotus japonicus
Lsat_1_v5_gn_6_115260 Lactuca sativa
Manes.15G007000 Manihot esculenta
MBI09_g03808_MAGBIO Magnolia biondii
MBI19_g29991_MAGBIO Magnolia biondii
MD13G1158800 Malus domestica
MD16G1159000 Malus domestica
Medtr2g034880 Medicago truncatula
Medtr2g034890 Medicago truncatula
MELO3C006698.2 Cucumis melo
Migut.N00060 Erythranthe guttata
MSTRG.21781 Avicennia marina
Nitab4.5_0000169g0050 Nicotiana tabacum
Nitab4.5_0000531g0070 Nicotiana tabacum
Nitab4.5_0001695g0020 Nicotiana tabacum
Nitab4.5_0005463g0090 Nicotiana tabacum
Nitab4.5_0008735g0010 Nicotiana tabacum
Nn3g21616 Nelumbo nucifera
Oeu006437.1 Olea europaea
Oeu016479.2 Olea europaea
Os01g0253400 Oryza sativa ssp. japonica
Peaxi162Scf00065g00033 Petunia axillaris
PGR031G1222 Punica granatum
PGSC0003DMG400014988 Solanum tuberosum
Phvul.003G110600 Phaseolus vulgaris
Phvul.009G253600 Phaseolus vulgaris
Potri.008G108900 Populus trichocarpa
Potri.010G140400 Populus trichocarpa
Potri.T170901 Populus trichocarpa
Prupe.1G125800 Prunus persica
Psat1g158200 Pisum sativum
PSO210G3751 Papaver somniferum
PSO761G0512 Papaver somniferum
QL06p011304 Quercus lobata
RcHm_v2.0_Chr4g0424271 Rosa chinensis
Rhsim04G0232200 Rhododendron simsii
Sabra08G0082500 Salix brachista
Sabra08G0082600 Salix brachista
Sabra10G0108500 Salix brachista
SalBow5G4838 Salvia bowleyana
Sc25g0003440 Simmondsia chinensis
Sed0010751 Sechium edule
SEGI_03781 Sequoiadendron giganteum
SEGI_27691 Sequoiadendron giganteum
SEGI_36016 Sequoiadendron giganteum
SGA_v2.0_scaffold119G32680 Striga asiatica
SGA_v2.0_scaffold91G28048 Striga asiatica
SMO118G0365 Selaginella moellendorffii
Solyc01g060450.3 Solanum lycopersicum
Sopen01g026590 Solanum pennellii
Sp2g19670 Schrenkiella parvula
TAR362G0369 Trochodendron aralioides
TAR633G2465 Trochodendron aralioides
THA.LOC104818896 Tarenaya hassleriana
Thecc.04G294800 Theobroma cacao
Thhalv10005363m.g Eutrema salsugineum
TPR.G27702 Trifolium pratense
TPR.G27704 Trifolium pratense
TWI09G1317 Tripterygium wilfordii
vmacro08077 Vaccinium macrocarpon
VMungo1215G3234 Vigna mungo
VMungo1309G2864 Vigna mungo
Zm00001eb127640 Zea mays

User provided reference genes

Program Settings